Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08110 Brassica napus
A03p59370 Brassica napus
A08p19460 Brassica napus
Aa31LG2G20550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis
Actinidia38805 Actinidia chinensis
Ah.04g153390 Amaranthus hybridus
Ah.13g075140 Amaranthus hybridus
AL7G22230 Arabidopsis lyrata
Aqoxy1G01195 Aquilegia oxysepala
Aqoxy7G02794 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea
AT4G30010 Arabidopsis thaliana
ATR0626G412 Amborella trichopoda
Atru.chr7.757 Acer truncatum
Atru.chr7.779 Acer truncatum
AUR62018340 Chenopodium quinoa
AUR62023991 Chenopodium quinoa
AUR62030327 Chenopodium quinoa
AUR62031980 Chenopodium quinoa
AUR62044702 Chenopodium quinoa
AUR62044703 Chenopodium quinoa
BcaB03g12628 Brassica carinata
BcaB03g15243 Brassica carinata
BcaC01g01207 Brassica carinata
BcaC09g51779 Brassica carinata
BcaNung00508 Brassica carinata
BcaNung06652 Brassica carinata
BcaNung06654 Brassica carinata
BolC3t21206H Brassica oleracea
BolC7t46209H Brassica oleracea
BraA03t14994Z Brassica rapa
BraA08t33908Z Brassica rapa
C03p88960 Brassica napus
C07p57400 Brassica napus
CAN.G308.14 Capsicum annuum
CANSAT11G0762 Cannabis sativa
CARHR237930 Cardamine hirsuta
Carub.0007s1064 Capsella rubella
Ca_02105_v3 Cicer arietinum L.
CBR_g50842 Chara braunii
Cc04_g00230 Coffea canephora
CDE04G2745 Ceratophyllum demersum
Ciclev10010043m.g Citrus clementina
CiPaw.09G075900 Carya illinoinensis
CiPaw.10G063900 Carya illinoinensis
ClCG06G013580 Citrullus lanatus
COL.COLO4_08559 Corchorus olitorius
COL.COLO4_22793 Corchorus olitorius
Cpa.g.sc95.12 Carica papaya
CsaV3_1G031860 Cucumis sativus L.
CSS0028266 Camellia sinensis var. sinensis
DCAR_007670 Daucus carota
Dinv25512 Davidia involucrata
Dinv44937 Davidia involucrata
Duzib150G0603 Durio zibethinus
Duzib150G1578 Durio zibethinus
ECA247G2100 Erigeron canadensis
EL10Ac3g07227 Beta vulgaris
Eucgr.C00118 Eucalyptus grandis
FAN07G0945 Fragaria x ananassa
FvH4_4g07310 Fragaria vesca
Glyma.09G059600 Glycine max
Glyma.15G165900 Glycine max
Gohir.A08G017500 Gossypium hirsutum
Gohir.A13G208400 Gossypium hirsutum
Gohir.A13G208500 Gossypium hirsutum
Gohir.D08G028100 Gossypium hirsutum
Gohir.D13G212800 Gossypium hirsutum
Gohir.D13G212900 Gossypium hirsutum
Gorai.004G025200 Gossypium raimondii
Gorai.013G243200 Gossypium raimondii
GSVIVG01010862001 Vitis vinifera
HanXRQChr15g0497481 Helianthus annuus
Haze_06091 Corylus avellana
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla
Lalb_Chr11g0074741 Lupinus albus
Lj6g0012502 Lotus japonicus
Lsat_1_v5_gn_1_39460 Lactuca sativa
Manes.06G020000 Manihot esculenta
Mapoly0011s0061 Marchantia polymorpha
MCO09G227 Micromonas commoda
MD07G1027600 Malus domestica
MD10G1108200 Malus domestica
MD13G1241900 Malus domestica
Medtr2g037990 Medicago truncatula
MELO3C017430.2 Cucumis melo
Migut.D00890 Erythranthe guttata
Migut.I01191 Erythranthe guttata
Nitab4.5_0000617g0120 Nicotiana tabacum
Nitab4.5_0001691g0180 Nicotiana tabacum
Nitab4.5_0002354g0060 Nicotiana tabacum
Nitab4.5_0003757g0090 Nicotiana tabacum
Nitab4.5_0006750g0010 Nicotiana tabacum
Nn8g40786 Nelumbo nucifera
Oeu001819.1 Olea europaea
Os02g0175800 Oryza sativa ssp. japonica
Peaxi162Scf00038g02542 Petunia axillaris
PGR142G1282 Punica granatum
PGSC0003DMG400026503 Solanum tuberosum
PGSC0003DMG400028757 Solanum tuberosum
Phvul.007G156600 Phaseolus vulgaris
Potri.006G075600 Populus trichocarpa
Potri.018G142500 Populus trichocarpa
Pp3c25_5460 Physcomitrium patens
Pp3c25_5480 Physcomitrium patens
Pp3c5_15280 Physcomitrium patens
Pp3c5_15650 Physcomitrium patens
Prupe.1G075600 Prunus persica
Psat1g144120 Pisum sativum
Psat1g144160 Pisum sativum
PSO063G0987 Papaver somniferum
PSO170G0997 Papaver somniferum
QL11p013920 Quercus lobata
QL11p013931 Quercus lobata
QL11p014429 Quercus lobata
QL11p014451 Quercus lobata
RcHm_v2.0_Chr4g0399651 Rosa chinensis
Rhsim08G0249700 Rhododendron simsii
Sabra18G0116400 Salix brachista
Sc12g0011140 Simmondsia chinensis
Sc15g0001010 Simmondsia chinensis
Sed0005101 Sechium edule
Sed0015624 Sechium edule
SHI03058 Sapria himalayana
SMO361G0023 Selaginella moellendorffii
Solyc06g063310.2 Solanum lycopersicum
Sopen06g022780 Solanum pennellii
Sp7g27810 Schrenkiella parvula
TAR625G1304 Trochodendron aralioides
TAR636G3350 Trochodendron aralioides
THA.LOC104803956 Tarenaya hassleriana
THA.LOC104803979 Tarenaya hassleriana
THA.LOC104811777 Tarenaya hassleriana
THA.LOC104814658 Tarenaya hassleriana
THA.LOC104820006 Tarenaya hassleriana
THA.LOC109116878 Tarenaya hassleriana
Thecc.09G185900 Theobroma cacao
Thhalv10026677m.g Eutrema salsugineum
TPR.G7575 Trifolium pratense
TWI34G0510 Tripterygium wilfordii
TWI63G0641 Tripterygium wilfordii
unitig_32.g11008 Utricularia gibba
unitig_748.g8030 Utricularia gibba
Zm00001eb233510 Zea mays

User provided reference genes

Program Settings