Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p39800 Brassica napus
Aa31LG7G8720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1676 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1620 Anthoceros agrestis
Actinidia27212 Actinidia chinensis
Actinidia27213 Actinidia chinensis
Actinidia28653 Actinidia chinensis
Actinidia28654 Actinidia chinensis
Ah.03g138750 Amaranthus hybridus
AL1G39420 Arabidopsis lyrata
Aqoxy3G00534 Aquilegia oxysepala
Aqoxy4G01498 Aquilegia oxysepala
Aqoxy4G01534 Aquilegia oxysepala
AT1G26330 Arabidopsis thaliana
ATR0827G101 Amborella trichopoda
Atru.chr11.1595 Acer truncatum
Atru.chr11.1596 Acer truncatum
AUR62003077 Chenopodium quinoa
AUR62007894 Chenopodium quinoa
BcaC05g26421 Brassica carinata
BcaC05g26635 Brassica carinata
BolC5t31196H Brassica oleracea
BraA09t39480Z Brassica rapa
C05p24600 Brassica napus
CAN.G707.24 Capsicum annuum
CANSAT64G2200 Cannabis sativa
CARHR025590 Cardamine hirsuta
Carub.0001s2467 Capsella rubella
Ca_22664_v3 Cicer arietinum L.
CBR_g18674 Chara braunii
Cc11_g11760 Coffea canephora
CDE11G0154 Ceratophyllum demersum
CDE11G1026 Ceratophyllum demersum
Cfa008858 Carpinus fangiana
Ciclev10033741m.g Citrus clementina
CiPaw.06G093500 Carya illinoinensis
ClCG05G022730 Citrullus lanatus
COL.COLO4_27850 Corchorus olitorius
Cpa.g.sc1669.1 Carica papaya
CsaV3_5G034290 Cucumis sativus L.
CSS0004641 Camellia sinensis var. sinensis
CSS0006420 Camellia sinensis var. sinensis
CSS0007829 Camellia sinensis var. sinensis
CSS0011617 Camellia sinensis var. sinensis
CSS0033973 Camellia sinensis var. sinensis
DCAR_023750 Daucus carota
Dinv34045 Davidia involucrata
Duzib251G0048 Durio zibethinus
ECA234G0983 Erigeron canadensis
EL10Ac6g15023 Beta vulgaris
Eucgr.G02429 Eucalyptus grandis
FAN07G2875 Fragaria x ananassa
FAN12G1725 Fragaria x ananassa
FAN22G2425 Fragaria x ananassa
FvH4_4g29660 Fragaria vesca
FvH4_7g33791 Fragaria vesca
Glyma.16G091700 Glycine max
Gohir.A12G159850 Gossypium hirsutum
Gohir.A12G159900 Gossypium hirsutum
Gohir.D12G163150 Gossypium hirsutum
Gohir.D12G163200 Gossypium hirsutum
Gorai.008G175800 Gossypium raimondii
Gorai.012G127400 Gossypium raimondii
GSVIVG01012245001 Vitis vinifera
GSVIVG01015130001 Vitis vinifera
GSVIVG01026037001 Vitis vinifera
GSVIVG01026043001 Vitis vinifera
GSVIVG01037061001 Vitis vinifera
HanXRQChr17g0568411 Helianthus annuus
Haze_11879 Corylus avellana
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla
HPP92_000888 Vanilla planifolia
Hund25161 Selenicereus undatus
Lalb_Chr09g0334721 Lupinus albus
Lj3A1029T37 Lonicera japonica
Lj4g0014066 Lotus japonicus
Lsat_1_v5_gn_4_11720 Lactuca sativa
Manes.01G026200 Manihot esculenta
Mapoly0001s0391 Marchantia polymorpha
Mapoly0111s0051 Marchantia polymorpha
MBI16_g37883_MAGBIO Magnolia biondii
MBI16_g47660_MAGBIO Magnolia biondii
MBI16_g47661_MAGBIO Magnolia biondii
MCO07G070 Micromonas commoda
MD16G1059100 Malus domestica
Medtr8g066290 Medicago truncatula
MELO3C012244.2 Cucumis melo
Migut.A01186 Erythranthe guttata
Migut.A01205 Erythranthe guttata
Migut.L01173 Erythranthe guttata
MSTRG.7735 Avicennia marina
Nitab4.5_0000027g0020 Nicotiana tabacum
Nitab4.5_0003545g0010 Nicotiana tabacum
Nn3g17507 Nelumbo nucifera
Oeu020362.1 Olea europaea
Oeu028720.1 Olea europaea
Oeu028721.1 Olea europaea
Os09g0101800 Oryza sativa ssp. japonica
Peaxi162Scf00175g00531 Petunia axillaris
PGR031G3471 Punica granatum
Phvul.003G282800 Phaseolus vulgaris
Potri.008G097700 Populus trichocarpa
Prupe.1G290000 Prunus persica
Psat1g014920 Pisum sativum
Psat4g122040 Pisum sativum
PSO017G2640 Papaver somniferum
PSO063G1330 Papaver somniferum
PSO478G0521 Papaver somniferum
QL03p073561 Quercus lobata
RcHm_v2.0_Chr4g0437911 Rosa chinensis
Rhsim09G0125700 Rhododendron simsii
Sabra08G0073900 Salix brachista
SalBow2G1731 Salvia bowleyana
Sc04g0007460 Simmondsia chinensis
Sed0022979 Sechium edule
SEGI_21482 Sequoiadendron giganteum
SEGI_38362 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07813 Striga asiatica
SHI10795 Sapria himalayana
SHI10796 Sapria himalayana
SHI10798 Sapria himalayana
SHI10799 Sapria himalayana
SMO084G0001 Selaginella moellendorffii
SMO116G0308 Selaginella moellendorffii
SMO269G0037 Selaginella moellendorffii
SMO269G0038 Selaginella moellendorffii
SMO269G0039 Selaginella moellendorffii
SMO358G0380 Selaginella moellendorffii
Solyc05g012060.4 Solanum lycopersicum
Sopen05g006850 Solanum pennellii
Sp1g22360 Schrenkiella parvula
TAR629G0168 Trochodendron aralioides
TAR629G1003 Trochodendron aralioides
TAR629G1720 Trochodendron aralioides
THA.LOC104822000 Tarenaya hassleriana
Thecc.02G326800 Theobroma cacao
Thhalv10006590m.g Eutrema salsugineum
TPR.G31932 Trifolium pratense
TPR.G31934 Trifolium pratense
TPR.G3371 Trifolium pratense
TPR.G36333 Trifolium pratense
TPR.G5839 Trifolium pratense
TPR.G8934 Trifolium pratense
TWI79G0892 Tripterygium wilfordii
unitig_26.g10284 Utricularia gibba
vmacro10440 Vaccinium macrocarpon
vmacro10441 Vaccinium macrocarpon
VMungo0251G2230 Vigna mungo
Zm00001eb095700 Zea mays

User provided reference genes

Program Settings