Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p68080 Brassica napus
A10p02520 Brassica napus
Aa31LG1G20810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis
Actinidia37536 Actinidia chinensis
AL1G13620 Arabidopsis lyrata
Aqoxy5G00176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea
AT1G04010 Arabidopsis thaliana
ATR0736G200 Amborella trichopoda
Atru.chr5.1783 Acer truncatum
Atru.chr5.1786 Acer truncatum
Atru.chr5.1796 Acer truncatum
AUR62008763 Chenopodium quinoa
AUR62025474 Chenopodium quinoa
BcaC05g24475 Brassica carinata
BcaC07g42217 Brassica carinata
BolC5t29011H Brassica oleracea
BolC8t52779H Brassica oleracea
BraA09t42143Z Brassica rapa
BraA10t42520Z Brassica rapa
C05p02330 Brassica napus
C08p52520 Brassica napus
CAN.G1270.3 Capsicum annuum
CANSAT01G2138 Cannabis sativa
CARHR003360 Cardamine hirsuta
Carub.0001s0317 Capsella rubella
Ca_08723_v3 Cicer arietinum L.
Cc01_g18010 Coffea canephora
CDE01G0548 Ceratophyllum demersum
Ciclev10019263m.g Citrus clementina
CiPaw.03G268400 Carya illinoinensis
ClCG07G001250 Citrullus lanatus
COL.COLO4_36581 Corchorus olitorius
Cpa.g.sc165.41 Carica papaya
CsaV3_3G028180 Cucumis sativus L.
CSS0004187 Camellia sinensis var. sinensis
CSS0008401 Camellia sinensis var. sinensis
CSS0009798 Camellia sinensis var. sinensis
CSS0021031 Camellia sinensis var. sinensis
CSS0024627 Camellia sinensis var. sinensis
CSS0026527 Camellia sinensis var. sinensis
CSS0032793 Camellia sinensis var. sinensis
CSS0033490 Camellia sinensis var. sinensis
CSS0034361 Camellia sinensis var. sinensis
CSS0048666 Camellia sinensis var. sinensis
CSS0049470 Camellia sinensis var. sinensis
CSS0050068 Camellia sinensis var. sinensis
DCAR_000927 Daucus carota
DCAR_018506 Daucus carota
Dinv16378 Davidia involucrata
Duzib133G0552 Durio zibethinus
Duzib138G0347 Durio zibethinus
ECA236G4817 Erigeron canadensis
EL10Ac7g17647 Beta vulgaris
Eucgr.A01366 Eucalyptus grandis
FAN15G2608 Fragaria x ananassa
FAN20G1599 Fragaria x ananassa
FAN24G3024 Fragaria x ananassa
FAN27G1261 Fragaria x ananassa
FvH4_2g20890 Fragaria vesca
Glyma.03G165500 Glycine max
Glyma.19G166800 Glycine max
Gohir.A08G045700 Gossypium hirsutum
Gohir.D08G056200 Gossypium hirsutum
Gorai.004G057300 Gossypium raimondii
GSVIVG01028386001 Vitis vinifera
HanXRQChr04g0111301 Helianthus annuus
Haze_24676 Corylus avellana
HPP92_012807 Vanilla planifolia
HPP92_012808 Vanilla planifolia
Hund05470 Selenicereus undatus
Lalb_Chr01g0019571 Lupinus albus
Lj1A78G31 Lonicera japonica
Lj1C71G15 Lonicera japonica
Lj1C79G2 Lonicera japonica
Lj1C79T15 Lonicera japonica
Lj1C79T2 Lonicera japonica
Lj1g0003710 Lotus japonicus
Lsat_1_v5_gn_2_111960 Lactuca sativa
Lsat_1_v5_gn_8_92240 Lactuca sativa
Manes.12G035200 Manihot esculenta
Manes.13G037500 Manihot esculenta
Mapoly0023s0070 Marchantia polymorpha
MBI07_g18994_MAGBIO Magnolia biondii
MBI13_g29642_MAGBIO Magnolia biondii
MD05G1192400 Malus domestica
MD10G1178900 Malus domestica
Medtr7g098010 Medicago truncatula
MELO3C012862.2 Cucumis melo
Migut.D00459 Erythranthe guttata
Migut.N02221 Erythranthe guttata
MSTRG.18341 Avicennia marina
Nitab4.5_0002389g0100 Nicotiana tabacum
Nitab4.5_0003295g0190 Nicotiana tabacum
Nn1g02898 Nelumbo nucifera
Oeu028892.3 Olea europaea
Os02g0814100 Oryza sativa ssp. japonica
Peaxi162Scf00415g00415 Petunia axillaris
Peaxi162Scf00415g00416 Petunia axillaris
PGR031G0691 Punica granatum
PGSC0003DMG401024284 Solanum tuberosum
Phvul.001G163200 Phaseolus vulgaris
Phvul.008G143913 Phaseolus vulgaris
Potri.014G195500 Populus trichocarpa
Pp3c16_20320 Physcomitrium patens
Prupe.8G218700 Prunus persica
Psat3g055720 Pisum sativum
PSO764G0099 Papaver somniferum
PSO832G3423 Papaver somniferum
PSO832G4005 Papaver somniferum
QL09p040550 Quercus lobata
RcHm_v2.0_Chr6g0287291 Rosa chinensis
Rhsim13G0038600 Rhododendron simsii
Sabra14G0144700 Salix brachista
SalBow4G0784 Salvia bowleyana
SalBow5G2300 Salvia bowleyana
Sc24g0003690 Simmondsia chinensis
Sed0008536 Sechium edule
SEGI_00315 Sequoiadendron giganteum
SEGI_08888 Sequoiadendron giganteum
SEGI_20278 Sequoiadendron giganteum
SEGI_20843 Sequoiadendron giganteum
SEGI_40684 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00640 Striga asiatica
SHI09711 Sapria himalayana
SHI09716 Sapria himalayana
SMO137G0113 Selaginella moellendorffii
SMO137G0189 Selaginella moellendorffii
SMO181G0004 Selaginella moellendorffii
SMO181G0022 Selaginella moellendorffii
SMO181G0033 Selaginella moellendorffii
SMO181G0034 Selaginella moellendorffii
SMO250G0011 Selaginella moellendorffii
Solyc09g072710.4 Solanum lycopersicum
Sopen09g028520 Solanum pennellii
Sp1g02850 Schrenkiella parvula
TAR362G0048 Trochodendron aralioides
THA.LOC104826048 Tarenaya hassleriana
Thecc.01G253300 Theobroma cacao
Thhalv10007051m.g Eutrema salsugineum
TPR.G9192 Trifolium pratense
TWI12G0664 Tripterygium wilfordii
TWI75G1829 Tripterygium wilfordii
vmacro02697 Vaccinium macrocarpon
VMungo0251G2796 Vigna mungo
VMungo1383G2176 Vigna mungo
Zm00001eb037190 Zea mays
Zm00001eb258680 Zea mays

User provided reference genes

Program Settings