Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41950 Brassica napus
A03p59500 Brassica napus
A05p11970 Brassica napus
A05p29890 Brassica napus
Aa31LG9G13490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5262 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5265 Anthoceros agrestis
Actinidia33600 Actinidia chinensis
Actinidia37902 Actinidia chinensis
AL4G29230 Arabidopsis lyrata
Aqoxy6G03042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6I9FYE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9NZM2 Arachis hypogaea
AT2G33560 Arabidopsis thaliana
ATR0605G152 Amborella trichopoda
Atru.chr13.32 Acer truncatum
AUR62035188 Chenopodium quinoa
BcaB02g10574 Brassica carinata
BcaB05g22459 Brassica carinata
BcaB05g22524 Brassica carinata
BcaB06g28697 Brassica carinata
BcaC02g07802 Brassica carinata
BcaC02g11440 Brassica carinata
BcaC03g13999 Brassica carinata
BcaC05g28813 Brassica carinata
BcaC08g45668 Brassica carinata
BcaC09g49204 Brassica carinata
BolC1t04101H Brassica oleracea
BolC2t07338H Brassica oleracea
BolC4t23123H Brassica oleracea
BolC4t27782H Brassica oleracea
BolC6t38544H Brassica oleracea
BolC8t46884H Brassica oleracea
BraA02t04781Z Brassica rapa
BraA02t08500Z Brassica rapa
BraA05t20140Z Brassica rapa
C01p41420 Brassica napus
C02p12380 Brassica napus
C04p15520 Brassica napus
C04p63070 Brassica napus
C05p49160 Brassica napus
C06p34250 Brassica napus
CAN.G1330.25 Capsicum annuum
CANSAT11G2529 Cannabis sativa
CARHR127580 Cardamine hirsuta
Carub.0004s1519 Capsella rubella
Ca_12499_v3 Cicer arietinum L.
CBR_g40020 Chara braunii
Cc10_g00160 Coffea canephora
CDE05G0313 Ceratophyllum demersum
Cfa009998 Carpinus fangiana
Cfa014153 Carpinus fangiana
Ciclev10001515m.g Citrus clementina
CiPaw.07G131300 Carya illinoinensis
ClCG11G019130 Citrullus lanatus
COL.COLO4_20704 Corchorus olitorius
Cpa.g.sc36.110 Carica papaya
Cre07.g351450 Chlamydomonas reinhardtii
CsaV3_4G037720 Cucumis sativus L.
CSS0014437 Camellia sinensis var. sinensis
CSS0031643 Camellia sinensis var. sinensis
DCAR_023017 Daucus carota
Dinv23346 Davidia involucrata
Duzib128G1725 Durio zibethinus
ECA238G2856 Erigeron canadensis
EL10Ac1g01845 Beta vulgaris
Eucgr.F03614 Eucalyptus grandis
FAN04G1628 Fragaria x ananassa
FAN08G1940 Fragaria x ananassa
FAN13G2929 Fragaria x ananassa
FAN18G1404 Fragaria x ananassa
FvH4_5g26460 Fragaria vesca
Glyma.07G159700 Glycine max
Glyma.20G006600 Glycine max
Gohir.A05G282600 Gossypium hirsutum
Gohir.D05G283800 Gossypium hirsutum
Gohir.D05G283802 Gossypium hirsutum
Gorai.009G298300 Gossypium raimondii
GSVIVG01011261001 Vitis vinifera
GSVIVG01013446001 Vitis vinifera
GSVIVG01023487001 Vitis vinifera
HanXRQChr14g0427951 Helianthus annuus
Haze_22877 Corylus avellana
Hma1.2p1_0076F.1_g039530 Hydrangea macrophylla
Hma1.2p1_0914F.1_g236160 Hydrangea macrophylla
Hma1.2p1_0914F.1_g236170 Hydrangea macrophylla
HPP92_020523 Vanilla planifolia
Hund05067 Selenicereus undatus
Lalb_Chr10g0095291 Lupinus albus
Lalb_Chr17g0338141 Lupinus albus
Lj2g0017318 Lotus japonicus
Lj4A813T64 Lonicera japonica
Lsat_1_v5_gn_2_3201 Lactuca sativa
Manes.05G129700 Manihot esculenta
MBI04_g18018_MAGBIO Magnolia biondii
MCO16G321 Micromonas commoda
MD00G1178400 Malus domestica
MD06G1001900 Malus domestica
Medtr1g035090 Medicago truncatula
MELO3C017066.2 Cucumis melo
Migut.N02996 Erythranthe guttata
MSTRG.22074 Avicennia marina
Nitab4.5_0000464g0110 Nicotiana tabacum
Nn5g31070 Nelumbo nucifera
Oeu035772.5 Olea europaea
Os02g0193600 Oryza sativa ssp. japonica
Peaxi162Scf00385g00719 Petunia axillaris
PGR031G2869 Punica granatum
PGSC0003DMG400010009 Solanum tuberosum
Phvul.003G009000 Phaseolus vulgaris
Phvul.004G105714 Phaseolus vulgaris
Potri.002G002900 Populus trichocarpa
Potri.005G258300 Populus trichocarpa
Pp3c17_9090 Physcomitrium patens
Pp3c24_5040 Physcomitrium patens
PRCOL_00006378 Prasinoderma coloniale
Prupe.5G002900 Prunus persica
Psat0ss2830g0360 Pisum sativum
Psat6g131960 Pisum sativum
PSO017G2996 Papaver somniferum
PSO170G6093 Papaver somniferum
QL02p016036 Quercus lobata
RcHm_v2.0_Chr7g0217371 Rosa chinensis
Rhsim06G0001700 Rhododendron simsii
Sabra02G0001700 Salix brachista
Sabra05G0200000 Salix brachista
SalBow6G2808 Salvia bowleyana
Sc02g0009340 Simmondsia chinensis
Sed0003879 Sechium edule
SEGI_14150 Sequoiadendron giganteum
SEGI_18344 Sequoiadendron giganteum
SEGI_18400 Sequoiadendron giganteum
SGA_v2.0_scaffold220G42609 Striga asiatica
SGA_v2.0_scaffold227G43179 Striga asiatica
SMO297G0023 Selaginella moellendorffii
SMO361G0195 Selaginella moellendorffii
SMO361G0676 Selaginella moellendorffii
Solyc04g082900.4 Solanum lycopersicum
Sopen04g036540 Solanum pennellii
Sp4g15900 Schrenkiella parvula
TAR625G0897 Trochodendron aralioides
THA.LOC104805020 Tarenaya hassleriana
Thecc.10G149200 Theobroma cacao
Thhalv10016779m.g Eutrema salsugineum
TPR.G22378 Trifolium pratense
TWI56G0687 Tripterygium wilfordii
unitig_85.g27224 Utricularia gibba
VMungo1215G1457 Vigna mungo
Zm00001eb206210 Zea mays
Zm00001eb236510 Zea mays

User provided reference genes

Program Settings