Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p64340 Brassica napus
Aa31LG1G2970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis
Ah.14g087960 Amaranthus hybridus
AL1G22990 Arabidopsis lyrata
Aqoxy1G02086 Aquilegia oxysepala
Aqoxy3G02634 Aquilegia oxysepala
Aqoxy3G03726 Aquilegia oxysepala
Aqoxy4G00762 Aquilegia oxysepala
Aqoxy5G03390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea
AT1G11800 Arabidopsis thaliana
ATR0794G089 Amborella trichopoda
Atru.chr10.2244 Acer truncatum
AUR62012723 Chenopodium quinoa
AUR62021933 Chenopodium quinoa
BcaB08g37425 Brassica carinata
BcaB08g37427 Brassica carinata
BcaB08g37428 Brassica carinata
BcaB08g37429 Brassica carinata
BcaC07g41757 Brassica carinata
BcaC07g41758 Brassica carinata
BolC8t52333H Brassica oleracea
BraA09t41776Z Brassica rapa
C08p47960 Brassica napus
CANSAT56G3877 Cannabis sativa
CARHR012140 Cardamine hirsuta
Carub.0001s1147 Capsella rubella
Ca_21076_v3 Cicer arietinum L.
CBR_g38366 Chara braunii
Cc09_g01540 Coffea canephora
CDE02G2441 Ceratophyllum demersum
Cfa015078 Carpinus fangiana
Ciclev10014440m.g Citrus clementina
CiPaw.09G093200 Carya illinoinensis
ClCG03G004640 Citrullus lanatus
COL.COLO4_31792 Corchorus olitorius
Cpa.g.sc152.26 Carica papaya
Cre06.g305050 Chlamydomonas reinhardtii
Cre06.g305250 Chlamydomonas reinhardtii
Cre12.g521600 Chlamydomonas reinhardtii
CsaV3_1G010670 Cucumis sativus L.
CSS0005056 Camellia sinensis var. sinensis
CSS0029720 Camellia sinensis var. sinensis
CSS0033735 Camellia sinensis var. sinensis
CSS0048087 Camellia sinensis var. sinensis
DCAR_024931 Daucus carota
DCAR_028195 Daucus carota
Dinv13904 Davidia involucrata
Dinv13905 Davidia involucrata
Dinv13906 Davidia involucrata
Dinv13907 Davidia involucrata
Dinv20060 Davidia involucrata
Dinv30719 Davidia involucrata
ECA236G0630 Erigeron canadensis
EL10Ac8g20076 Beta vulgaris
Eucgr.D01342 Eucalyptus grandis
FAN21G0664 Fragaria x ananassa
FAN25G1168 Fragaria x ananassa
FvH4_3g01860 Fragaria vesca
Glyma.07G261700 Glycine max
Glyma.17G012400 Glycine max
Gohir.A06G207300 Gossypium hirsutum
Gohir.D06G214000 Gossypium hirsutum
Gorai.010G252100 Gossypium raimondii
GSVIVG01012711001 Vitis vinifera
HanXRQChr05g0129391 Helianthus annuus
HanXRQChr15g0470651 Helianthus annuus
Haze_06812 Corylus avellana
Haze_06813 Corylus avellana
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla
HPP92_001591 Vanilla planifolia
HPP92_001597 Vanilla planifolia
HPP92_014181 Vanilla planifolia
Hund23457 Selenicereus undatus
Lalb_Chr12g0196051 Lupinus albus
Lj1A1232T94 Lonicera japonica
Lj2C267G4 Lonicera japonica
Lj4g0022599 Lotus japonicus
Lsat_1_v5_gn_7_16360 Lactuca sativa
Manes.16G005800 Manihot esculenta
Mapoly0028s0073 Marchantia polymorpha
Mapoly0074s0008 Marchantia polymorpha
MCO11G820 Micromonas commoda
MD10G1323300 Malus domestica
Medtr4g132300 Medicago truncatula
MELO3C002448.2 Cucumis melo
Migut.M01330 Erythranthe guttata
Migut.M01331 Erythranthe guttata
MSTRG.15996 Avicennia marina
Nitab4.5_0000005g0300 Nicotiana tabacum
Nitab4.5_0011734g0010 Nicotiana tabacum
Nn1g07169 Nelumbo nucifera
Os07g0510300 Oryza sativa ssp. japonica
Os07g0510350 Oryza sativa ssp. japonica
Os07g0510800 Oryza sativa ssp. japonica
Os10g0401100 Oryza sativa ssp. japonica
Os12g0414900 Oryza sativa ssp. japonica
Peaxi162Scf00307g01425 Petunia axillaris
Peaxi162Scf00394g00019 Petunia axillaris
PGR042G1615 Punica granatum
PGSC0003DMG400019871 Solanum tuberosum
PGSC0003DMG400026496 Solanum tuberosum
Phvul.003G080000 Phaseolus vulgaris
Potri.004G010400 Populus trichocarpa
Potri.004G010900 Populus trichocarpa
Pp3c20_16850 Physcomitrium patens
PRCOL_00004553 Prasinoderma coloniale
PRCOL_00006577 Prasinoderma coloniale
Prupe.4G019000 Prunus persica
Psat4g006200 Pisum sativum
Psat6g178560 Pisum sativum
PSO017G1772 Papaver somniferum
PSO541G2704 Papaver somniferum
PSO541G5924 Papaver somniferum
PSO675G1521 Papaver somniferum
PSO675G7903 Papaver somniferum
PSO832G4260 Papaver somniferum
QL05p072835 Quercus lobata
QL05p072840 Quercus lobata
QL05p072848 Quercus lobata
QL05p072858 Quercus lobata
RcHm_v2.0_Chr5g0002731 Rosa chinensis
Rhsim02G0106300 Rhododendron simsii
Sabra04G0005400 Salix brachista
SalBow8G2768 Salvia bowleyana
Sc24g0000210 Simmondsia chinensis
Sed0013617 Sechium edule
Sed0026378 Sechium edule
SEGI_33731 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01909 Striga asiatica
SHI02217 Sapria himalayana
SMO361G0593 Selaginella moellendorffii
Solyc02g032870.4 Solanum lycopersicum
Sopen02g011270 Solanum pennellii
Sp1g10430 Schrenkiella parvula
TAR624G0274 Trochodendron aralioides
THA.LOC104809500 Tarenaya hassleriana
Thecc.06G222700 Theobroma cacao
Thhalv10006713m.g Eutrema salsugineum
TPR.G22185 Trifolium pratense
TPR.G37060 Trifolium pratense
TWI63G0901 Tripterygium wilfordii
unitig_748.g7590 Utricularia gibba
vmacro15793 Vaccinium macrocarpon
VMungo1215G2760 Vigna mungo
Zm00001eb043220 Zea mays
Zm00001eb048580 Zea mays

User provided reference genes

Program Settings