Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03620 Brassica napus
A03p07850 Brassica napus
A10p22660 Brassica napus
Aa31LG11G13100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis
Actinidia01601 Actinidia chinensis
Actinidia17180 Actinidia chinensis
Actinidia28792 Actinidia chinensis
AL3G36180 Arabidopsis lyrata
AL6G27510 Arabidopsis lyrata
AL92U10070 Arabidopsis lyrata
Aqoxy3G04045 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea
AT5G16550 Arabidopsis thaliana
Atru.chr1.1949 Acer truncatum
BcaB01g04976 Brassica carinata
BcaB08g36840 Brassica carinata
BcaC03g18497 Brassica carinata
BcaC03g18499 Brassica carinata
BcaC04g18869 Brassica carinata
BolC2t06759H Brassica oleracea
BolC3t13402H Brassica oleracea
BolC9t58894H Brassica oleracea
BraA02t05331Z Brassica rapa
BraA10t44327Z Brassica rapa
C02p08410 Brassica napus
C03p09070 Brassica napus
C09p60610 Brassica napus
CANSAT78G0803 Cannabis sativa
CARHR196670 Cardamine hirsuta
CARHR196680 Cardamine hirsuta
CARHR196690 Cardamine hirsuta
Carub.0006s1475 Capsella rubella
Ca_06292_v3 Cicer arietinum L.
Cc07_g13020 Coffea canephora
CDE05G2820 Ceratophyllum demersum
CDE11G1189 Ceratophyllum demersum
Cfa000260 Carpinus fangiana
Cfa007772 Carpinus fangiana
Ciclev10029179m.g Citrus clementina
CiPaw.03G075500 Carya illinoinensis
CiPaw.04G048500 Carya illinoinensis
CiPaw.08G183000 Carya illinoinensis
ClCG01G008740 Citrullus lanatus
COL.COLO4_19777 Corchorus olitorius
Cpa.g.sc178.1 Carica papaya
CsaV3_5G024270 Cucumis sativus L.
CSS0027542 Camellia sinensis var. sinensis
CSS0034638 Camellia sinensis var. sinensis
DCAR_003417 Daucus carota
DCAR_003418 Daucus carota
Dinv19063 Davidia involucrata
Dinv28224 Davidia involucrata
Duzib133G0236 Durio zibethinus
Duzib138G1863 Durio zibethinus
ECA246G1322 Erigeron canadensis
EL10Ac2g03209 Beta vulgaris
EL10Ac2g03210 Beta vulgaris
Eucgr.J01625 Eucalyptus grandis
FAN19G0113 Fragaria x ananassa
FAN26G0615 Fragaria x ananassa
FAN28G0886 Fragaria x ananassa
FvH4_1g28640 Fragaria vesca
Glyma.02G242200 Glycine max
Glyma.11G213800 Glycine max
Glyma.18G042900 Glycine max
Gohir.A07G073800 Gossypium hirsutum
Gohir.A11G169300 Gossypium hirsutum
Gohir.D07G078500 Gossypium hirsutum
Gohir.D11G175500 Gossypium hirsutum
Gorai.001G082900 Gossypium raimondii
Gorai.007G188100 Gossypium raimondii
GSVIVG01026318001 Vitis vinifera
HanXRQChr15g0489811 Helianthus annuus
Haze_14300 Corylus avellana
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla
HPP92_017642 Vanilla planifolia
Hund13074 Selenicereus undatus
Lalb_Chr10g0104161 Lupinus albus
Lalb_Chr17g0345951 Lupinus albus
Lalb_Chr18g0053611 Lupinus albus
Lj2A514G44 Lonicera japonica
Lj4A255T23 Lonicera japonica
Lj6g0018793 Lotus japonicus
LjContig00141g0002036 Lotus japonicus
Lsat_1_v5_gn_8_111520 Lactuca sativa
Manes.01G121800 Manihot esculenta
Manes.02G079800 Manihot esculenta
Mapoly0035s0070 Marchantia polymorpha
MBI13_g35399_MAGBIO Magnolia biondii
MD09G1265200 Malus domestica
MD17G1261400 Malus domestica
Medtr5g077280 Medicago truncatula
Medtr5g091900 Medicago truncatula
MELO3C025122.2 Cucumis melo
Migut.K01110 Erythranthe guttata
MSTRG.15645 Avicennia marina
MSTRG.3688 Avicennia marina
Nitab4.5_0001088g0190 Nicotiana tabacum
Nitab4.5_0002465g0010 Nicotiana tabacum
Nn4g24526 Nelumbo nucifera
Oeu014715.1 Olea europaea
Oeu029081.1 Olea europaea
Oeu032311.1 Olea europaea
Peaxi162Scf00078g00178 Petunia axillaris
Peaxi162Scf00085g00527 Petunia axillaris
PGR042G3611 Punica granatum
PGSC0003DMG400013258 Solanum tuberosum
Phvul.001G228000 Phaseolus vulgaris
Phvul.008G238800 Phaseolus vulgaris
Potri.004G082300 Populus trichocarpa
Pp3c25_6290 Physcomitrium patens
Pp3c6_9570 Physcomitrium patens
Prupe.3G163400 Prunus persica
Psat2g014520 Pisum sativum
Psat2g044600 Pisum sativum
PSO170G5471 Papaver somniferum
PSO407G0171 Papaver somniferum
QL02p059972 Quercus lobata
RcHm_v2.0_Chr3g0492651 Rosa chinensis
Rhsim10G0182800 Rhododendron simsii
Sabra04G0054800 Salix brachista
SalBow3G4475 Salvia bowleyana
Sc11g0004530 Simmondsia chinensis
Sc11g0004790 Simmondsia chinensis
Sed0000771 Sechium edule
SEGI_39153 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17134 Striga asiatica
Solyc11g011760.3 Solanum lycopersicum
Sopen11g006600 Solanum pennellii
Sp6g27610 Schrenkiella parvula
TAR622G0462 Trochodendron aralioides
TAR629G3076 Trochodendron aralioides
THA.LOC104820912 Tarenaya hassleriana
Thecc.04G001700 Theobroma cacao
Thhalv10014473m.g Eutrema salsugineum
TPR.G12527 Trifolium pratense
TPR.G9990 Trifolium pratense
TWI53G1040 Tripterygium wilfordii
unitig_748.g8451 Utricularia gibba
vmacro20490 Vaccinium macrocarpon
VMungo0647G1435 Vigna mungo
VMungo1383G0526 Vigna mungo
Zm00001eb041900 Zea mays
Zm00001eb099130 Zea mays
Zm00001eb179280 Zea mays

User provided reference genes

Program Settings