Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08520 Brassica napus
A08p19620 Brassica napus
Aa31LG2G20960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis
Actinidia29889 Actinidia chinensis
Ah.09g228480 Amaranthus hybridus
AL7G22880 Arabidopsis lyrata
Aqoxy7G01262 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea
AT4G29520 Arabidopsis thaliana
ATR0789G094 Amborella trichopoda
Atru.chr7.1544 Acer truncatum
AUR62027447 Chenopodium quinoa
AUR62031253 Chenopodium quinoa
BcaB03g12610 Brassica carinata
BcaC01g01175 Brassica carinata
BcaC09g51740 Brassica carinata
BolC1t00957H Brassica oleracea
BolC3t21234H Brassica oleracea
BraA01t00801Z Brassica rapa
BraA08t33920Z Brassica rapa
C01p09950 Brassica napus
C03p89240 Brassica napus
CAN.G1837.4 Capsicum annuum
CANSAT56G0365 Cannabis sativa
CARHR109770 Cardamine hirsuta
CARHR237350 Cardamine hirsuta
Carub.0007s1103 Capsella rubella
Ca_25616_v3 Cicer arietinum L.
CBR_g8029 Chara braunii
Cc06_g11080 Coffea canephora
Cc06_g18040 Coffea canephora
CDE05G0556 Ceratophyllum demersum
CDE05G1139 Ceratophyllum demersum
Cfa003116 Carpinus fangiana
Ciclev10009015m.g Citrus clementina
CiPaw.03G218800 Carya illinoinensis
CiPaw.05G072200 Carya illinoinensis
ClCG03G015800 Citrullus lanatus
COL.COLO4_18228 Corchorus olitorius
Cpa.g.sc7.248 Carica papaya
Cre03.g151700 Chlamydomonas reinhardtii
CsaV3_1G040210 Cucumis sativus L.
CsaV3_UNG060480 Cucumis sativus L.
CSS0009775 Camellia sinensis var. sinensis
DCAR_011989 Daucus carota
Dinv36742 Davidia involucrata
Dinv42295 Davidia involucrata
Duzib150G0148 Durio zibethinus
Duzib168G1170 Durio zibethinus
ECA234G2984 Erigeron canadensis
EL10Ac8g19275 Beta vulgaris
Eucgr.C00917 Eucalyptus grandis
FAN19G2121 Fragaria x ananassa
FAN23G2709 Fragaria x ananassa
FAN26G1352 Fragaria x ananassa
FAN26G3436 Fragaria x ananassa
FAN28G1050 Fragaria x ananassa
FvH4_1g07000 Fragaria vesca
Glyma.01G003700 Glycine max
Glyma.07G128200 Glycine max
Gohir.A07G010100 Gossypium hirsutum
Gohir.D07G010400 Gossypium hirsutum
Gorai.001G010800 Gossypium raimondii
GSVIVG01015235001 Vitis vinifera
HanXRQChr10g0319131 Helianthus annuus
HanXRQChr12g0355371 Helianthus annuus
Haze_25884 Corylus avellana
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla
HPP92_004560 Vanilla planifolia
Lalb_Chr14g0375311 Lupinus albus
Lalb_Chr24g0393881 Lupinus albus
Lj2g0005770 Lotus japonicus
Lj7C672T15 Lonicera japonica
Lsat_1_v5_gn_5_145840 Lactuca sativa
Manes.14G155500 Manihot esculenta
Manes.16G104000 Manihot esculenta
Mapoly0075s0048 Marchantia polymorpha
MCO04G519 Micromonas commoda
MD02G1074400 Malus domestica
MD15G1203900 Malus domestica
Medtr6g077350 Medicago truncatula
Medtr6g090810 Medicago truncatula
Medtr6g091780 Medicago truncatula
Medtr6g091840 Medicago truncatula
Medtr6g091870 Medicago truncatula
Medtr6g092150 Medicago truncatula
Medtr6g092180 Medicago truncatula
MELO3C015448.2 Cucumis melo
Migut.K00580 Erythranthe guttata
MSTRG.10579 Avicennia marina
Nitab4.5_0000713g0230 Nicotiana tabacum
Nitab4.5_0007297g0010 Nicotiana tabacum
Nn2g13205 Nelumbo nucifera
Nn3g21874 Nelumbo nucifera
Nn6g35421 Nelumbo nucifera
Oeu037598.1 Olea europaea
Oeu037599.1 Olea europaea
Os06g0150400 Oryza sativa ssp. japonica
Peaxi162Scf00444g00617 Petunia axillaris
PGR142G3354 Punica granatum
PGSC0003DMG400008434 Solanum tuberosum
Phvul.004G172100 Phaseolus vulgaris
Potri.018G067300 Populus trichocarpa
Pp3c4_19450 Physcomitrium patens
PRCOL_00005979 Prasinoderma coloniale
Prupe.7G213500 Prunus persica
Psat1g049760 Pisum sativum
PSO210G2479 Papaver somniferum
PSO210G4737 Papaver somniferum
QL02p063162 Quercus lobata
RcHm_v2.0_Chr2g0092951 Rosa chinensis
RcHm_v2.0_Chr4g0402141 Rosa chinensis
RcHm_v2.0_Chr5g0016971 Rosa chinensis
Rhsim03G0234400 Rhododendron simsii
Sabra18G0059800 Salix brachista
SalBow1G2721 Salvia bowleyana
Sc18g0001850 Simmondsia chinensis
Sed0008469 Sechium edule
SEGI_24488 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05207 Striga asiatica
SHI02816 Sapria himalayana
SMO361G0136 Selaginella moellendorffii
Solyc07g032250.4 Solanum lycopersicum
Sopen07g015910 Solanum pennellii
Sp7g27380 Schrenkiella parvula
TAR365G0154 Trochodendron aralioides
TAR636G2165 Trochodendron aralioides
THA.LOC104814605 Tarenaya hassleriana
Thecc.09G093000 Theobroma cacao
Thhalv10025804m.g Eutrema salsugineum
TPR.G35493 Trifolium pratense
TWI63G1476 Tripterygium wilfordii
unitig_26.g9167 Utricularia gibba
unitig_26.g9168 Utricularia gibba
unitig_749.g14227 Utricularia gibba
unitig_78.g29619 Utricularia gibba
vmacro06275 Vaccinium macrocarpon
VMungo0464G1844 Vigna mungo
Zm00001eb376850 Zea mays

User provided reference genes

Program Settings