Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p08610 Brassica napus
A09p32980 Brassica napus
Aa31LG6G7800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis
Actinidia39050 Actinidia chinensis
Ah.03g147430 Amaranthus hybridus
AL1G47670 Arabidopsis lyrata
Aqoxy5G02422 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea
AT1G33270 Arabidopsis thaliana
ATR0684G093 Amborella trichopoda
Atru.chr6.830 Acer truncatum
AUR62003500 Chenopodium quinoa
AUR62003501 Chenopodium quinoa
AUR62017811 Chenopodium quinoa
BcaB04g17919 Brassica carinata
BcaB07g32965 Brassica carinata
BcaC07g37556 Brassica carinata
BcaC08g43878 Brassica carinata
BolC6t36417H Brassica oleracea
BolC8t47898H Brassica oleracea
BraA08t32874Z Brassica rapa
BraA09t38838Z Brassica rapa
C06p12670 Brassica napus
CAN.G1577.7 Capsicum annuum
CANSAT11G0917 Cannabis sativa
CARHR032640 Cardamine hirsuta
CARHR054090 Cardamine hirsuta
CARHR054100 Cardamine hirsuta
Carub.0001s3147 Capsella rubella
Ca_00086_v3 Cicer arietinum L.
Ca_20167_v3 Cicer arietinum L.
Ca_29925_v3 Cicer arietinum L.
CBR_g22336 Chara braunii
CBR_g45217 Chara braunii
Cc02_g22360 Coffea canephora
CDE05G0822 Ceratophyllum demersum
Cfa005536 Carpinus fangiana
Ciclev10001315m.g Citrus clementina
CiPaw.06G148500 Carya illinoinensis
ClCG05G009760 Citrullus lanatus
COL.COLO4_17882 Corchorus olitorius
Cpa.g.sc2.5 Carica papaya
Cre03.g175100 Chlamydomonas reinhardtii
Cre03.g195500 Chlamydomonas reinhardtii
Cre09.g400219 Chlamydomonas reinhardtii
Cre12.g530950 Chlamydomonas reinhardtii
Cre26.g756847 Chlamydomonas reinhardtii
CsaV3_3G018910 Cucumis sativus L.
CSS0021494 Camellia sinensis var. sinensis
CSS0024235 Camellia sinensis var. sinensis
DCAR_001819 Daucus carota
Dinv19356 Davidia involucrata
Duzib052G0674 Durio zibethinus
Duzib248G0906 Durio zibethinus
ECA236G4599 Erigeron canadensis
EL10Ac6g15372 Beta vulgaris
Eucgr.G00613 Eucalyptus grandis
FAN01G0209 Fragaria x ananassa
FAN04G2298 Fragaria x ananassa
FAN06G5097 Fragaria x ananassa
FAN11G3733 Fragaria x ananassa
FAN12G1704 Fragaria x ananassa
FAN13G1313 Fragaria x ananassa
FAN15G1005 Fragaria x ananassa
FAN17G0369 Fragaria x ananassa
FAN17G1425 Fragaria x ananassa
FAN17G1951 Fragaria x ananassa
FAN18G2930 Fragaria x ananassa
FAN25G1134 Fragaria x ananassa
FvH4_3g12743 Fragaria vesca
FvH4_3g29702 Fragaria vesca
FvH4_4g16550 Fragaria vesca
FvH4_5g29680 Fragaria vesca
Glyma.08G184900 Glycine max
Glyma.15G047800 Glycine max
Gohir.A01G001000 Gossypium hirsutum
Gohir.A08G000149 Gossypium hirsutum
Gohir.D01G000700 Gossypium hirsutum
Gohir.D08G010200 Gossypium hirsutum
Gorai.002G001200 Gossypium raimondii
Gorai.004G003500 Gossypium raimondii
GSVIVG01022999001 Vitis vinifera
HanXRQChr02g0058791 Helianthus annuus
HanXRQChr11g0333531 Helianthus annuus
Haze_01635 Corylus avellana
HPP92_002187 Vanilla planifolia
Hund04330 Selenicereus undatus
Lalb_Chr18g0060861 Lupinus albus
Lalb_Chr20g0123411 Lupinus albus
Lj5A251T70 Lonicera japonica
Lj6g0009653 Lotus japonicus
Lsat_1_v5_gn_7_77761 Lactuca sativa
Manes.07G014400 Manihot esculenta
Mapoly0101s0012 Marchantia polymorpha
MBI03_g28294_MAGBIO Magnolia biondii
MCO01G237 Micromonas commoda
MCO09G146 Micromonas commoda
MCO11G494 Micromonas commoda
MD15G1421100 Malus domestica
Medtr2g007650 Medicago truncatula
MELO3C019485.2 Cucumis melo
Migut.N01037 Erythranthe guttata
Nitab4.5_0002245g0180 Nicotiana tabacum
Nitab4.5_0011195g0040 Nicotiana tabacum
Nn1g08650 Nelumbo nucifera
Oeu012747.1 Olea europaea
Os11g0546300 Oryza sativa ssp. japonica
Peaxi162Scf00011g00243 Petunia axillaris
PGR042G0956 Punica granatum
PGSC0003DMG400023754 Solanum tuberosum
Phvul.006G213000 Phaseolus vulgaris
Potri.001G209500 Populus trichocarpa
Potri.003G020800 Populus trichocarpa
Pp3c11_20720 Physcomitrium patens
PRCOL_00003693 Prasinoderma coloniale
Prupe.1G566300 Prunus persica
Psat1g224280 Pisum sativum
PSO063G6322 Papaver somniferum
PSO170G4712 Papaver somniferum
QL02p098488 Quercus lobata
RcHm_v2.0_Chr7g0223001 Rosa chinensis
Rhsim05G0119100 Rhododendron simsii
Rhsim11G0130300 Rhododendron simsii
Sabra01G0161800 Salix brachista
Sabra03G0012100 Salix brachista
SalBow6G0918 Salvia bowleyana
SalBow6G1869 Salvia bowleyana
Sc07g0007240 Simmondsia chinensis
Sed0026856 Sechium edule
SEGI_13232 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36067 Striga asiatica
SMO139G0053 Selaginella moellendorffii
SMO145G0200 Selaginella moellendorffii
Solyc01g104310.3 Solanum lycopersicum
Sopen01g046750 Solanum pennellii
Sp1g28730 Schrenkiella parvula
TAR376G0678 Trochodendron aralioides
TAR628G0980 Trochodendron aralioides
THA.LOC104810264 Tarenaya hassleriana
THA.LOC104813074 Tarenaya hassleriana
Thecc.02G040000 Theobroma cacao
Thhalv10007991m.g Eutrema salsugineum
TPR.G2103 Trifolium pratense
TWI59G0754 Tripterygium wilfordii
vmacro01769 Vaccinium macrocarpon
vmacro19901 Vaccinium macrocarpon
VMungo0540G0757 Vigna mungo
Zm00001eb113740 Zea mays

User provided reference genes

Program Settings