Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46950 Brassica napus
A09p21300 Brassica napus
Aa31LG9G8440 Aethionema arabicum
Aa31LG9G8830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.308 Anthoceros agrestis
Ah.02g131070 Amaranthus hybridus
AL8G14800 Arabidopsis lyrata
Aqoxy1G01399 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C65LVJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D040QL Arachis hypogaea
AT5G44730 Arabidopsis thaliana
ATR0763G111 Amborella trichopoda
Atru.chr10.297 Acer truncatum
AUR62005675 Chenopodium quinoa
AUR62028880 Chenopodium quinoa
BcaB07g30927 Brassica carinata
BcaC04g21818 Brassica carinata
BcaC06g34510 Brassica carinata
BolC7t43301H Brassica oleracea
BolC9t55592H Brassica oleracea
BraA06t27568Z Brassica rapa
BraA09t37735Z Brassica rapa
C07p27700 Brassica napus
C09p27080 Brassica napus
CAN.G809.53 Capsicum annuum
CANSAT54G2025 Cannabis sativa
CARHR178170 Cardamine hirsuta
Carub.0008s0353 Capsella rubella
Ca_01982_v3 Cicer arietinum L.
Ca_01984_v3 Cicer arietinum L.
Ca_01986_v3 Cicer arietinum L.
Cc09_g05120 Coffea canephora
CDE05G3391 Ceratophyllum demersum
CDE11G0920 Ceratophyllum demersum
Cfa025962 Carpinus fangiana
Ciclev10016366m.g Citrus clementina
CiPaw.09G137900 Carya illinoinensis
CiPaw.10G105700 Carya illinoinensis
ClCG01G025740 Citrullus lanatus
COL.COLO4_16227 Corchorus olitorius
Cpa.g.sc30.100 Carica papaya
CsaV3_6G052980 Cucumis sativus L.
CSS0010455 Camellia sinensis var. sinensis
CSS0019994 Camellia sinensis var. sinensis
CSS0036020 Camellia sinensis var. sinensis
CSS0044663 Camellia sinensis var. sinensis
DCAR_003759 Daucus carota
DCAR_007776 Daucus carota
Dinv01021 Davidia involucrata
Dinv07002 Davidia involucrata
Duzib052G0480 Durio zibethinus
Duzib132G1236 Durio zibethinus
ECA236G0137 Erigeron canadensis
EL10Ac6g13559 Beta vulgaris
Eucgr.D00011 Eucalyptus grandis
FAN11G1970 Fragaria x ananassa
FAN16G2045 Fragaria x ananassa
FAN21G2782 Fragaria x ananassa
FAN25G2296 Fragaria x ananassa
FvH4_3g13030 Fragaria vesca
Glyma.09G050700 Glycine max
Glyma.15G156700 Glycine max
Gohir.A11G219600 Gossypium hirsutum
Gohir.D11G203900 Gossypium hirsutum
Gorai.007G218800 Gossypium raimondii
GSVIVG01012153001 Vitis vinifera
HanXRQChr16g0510381 Helianthus annuus
Haze_05268 Corylus avellana
Haze_05273 Corylus avellana
Haze_05274 Corylus avellana
Haze_05283 Corylus avellana
Haze_05286 Corylus avellana
Haze_05288 Corylus avellana
Haze_05290 Corylus avellana
Haze_05293 Corylus avellana
Hma1.2p1_0088F.1_g045270 Hydrangea macrophylla
Hma1.2p1_1011F.1_g247510 Hydrangea macrophylla
HPP92_011006 Vanilla planifolia
Hund06113 Selenicereus undatus
Lalb_Chr15g0083711 Lupinus albus
Lalb_Chr15g0083731 Lupinus albus
Lalb_Chr20g0114311 Lupinus albus
Lj2A342G117 Lonicera japonica
Lj2A342T116 Lonicera japonica
Lj6g0011694 Lotus japonicus
Lsat_1_v5_gn_8_100741 Lactuca sativa
Manes.16G057900 Manihot esculenta
Mapoly0113s0023 Marchantia polymorpha
MBI18_g01521_MAGBIO Magnolia biondii
MD05G1245600 Malus domestica
MD10G1226900 Malus domestica
MD14G1109200 Malus domestica
Medtr2g035440 Medicago truncatula
Migut.M02014 Erythranthe guttata
MSTRG.16373 Avicennia marina
Nitab4.5_0003602g0030 Nicotiana tabacum
Nitab4.5_0003902g0100 Nicotiana tabacum
Nn2g13837 Nelumbo nucifera
Nn6g35246 Nelumbo nucifera
Oeu008731.1 Olea europaea
Os02g0173600 Oryza sativa ssp. japonica
Os06g0665100 Oryza sativa ssp. japonica
Peaxi162Scf00036g02214 Petunia axillaris
PGR004G1274 Punica granatum
PGSC0003DMG400007327 Solanum tuberosum
PGSC0003DMG400007328 Solanum tuberosum
Phvul.009G243000 Phaseolus vulgaris
Potri.003G154500 Populus trichocarpa
Pp3c17_20220 Physcomitrium patens
Pp3c2_4490 Physcomitrium patens
Pp3c8_22630 Physcomitrium patens
PRCOL_00004641 Prasinoderma coloniale
Prupe.4G118300 Prunus persica
Psat1g150320 Pisum sativum
PSO675G0356 Papaver somniferum
PSO675G4596 Papaver somniferum
QL11p012028 Quercus lobata
RcHm_v2.0_Chr5g0021221 Rosa chinensis
Rhsim07G0106700 Rhododendron simsii
Rhsim07G0107300 Rhododendron simsii
Rhsim13G0134100 Rhododendron simsii
RhsimUnG0177000 Rhododendron simsii
Sabra03G0111800 Salix brachista
SalBow8G3731 Salvia bowleyana
Sc04g0010410 Simmondsia chinensis
Sed0024720 Sechium edule
SEGI_30550 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38868 Striga asiatica
SMO351G0551 Selaginella moellendorffii
Solyc02g081820.3 Solanum lycopersicum
Solyc02g081830.4 Solanum lycopersicum
Sopen02g026420 Solanum pennellii
Sopen02g026430 Solanum pennellii
Sp2g09570 Schrenkiella parvula
TAR624G0928 Trochodendron aralioides
TAR626G1771 Trochodendron aralioides
THA.LOC104806228 Tarenaya hassleriana
THA.LOC104811853 Tarenaya hassleriana
Thecc.02G003200 Theobroma cacao
Thhalv10001002m.g Eutrema salsugineum
TPR.G29696 Trifolium pratense
TPR.G688 Trifolium pratense
TWI63G0736 Tripterygium wilfordii
TWI63G1259 Tripterygium wilfordii
TWI63G1368 Tripterygium wilfordii
unitig_748.g8070 Utricularia gibba
vmacro03559 Vaccinium macrocarpon
VMungo1309G2001 Vigna mungo
Zm00001eb207070 Zea mays
Zm00001eb389800 Zea mays

User provided reference genes

Program Settings