Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p08260 Brassica napus
Aa31LG1G18580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.432 Anthoceros agrestis
Actinidia08867 Actinidia chinensis
Actinidia25582 Actinidia chinensis
Actinidia33102 Actinidia chinensis
AL8G40520 Arabidopsis lyrata
Aqoxy3G01521 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9DG48R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKYK26 Arachis hypogaea
AT5G63460 Arabidopsis thaliana
ATR0561G036 Amborella trichopoda
Atru.chr9.1061 Acer truncatum
AUR62029623 Chenopodium quinoa
BcaB04g19918 Brassica carinata
BcaC03g18207 Brassica carinata
BcaC04g23330 Brassica carinata
BraA02t09201Z Brassica rapa
BraA09t36477Z Brassica rapa
CAN.G352.25 Capsicum annuum
CANSAT80G0771 Cannabis sativa
CARHR277310 Cardamine hirsuta
Carub.0008s2416 Capsella rubella
CBR_g27958 Chara braunii
CBR_g36334 Chara braunii
Cc04_g10030 Coffea canephora
CDE02G1054 Ceratophyllum demersum
CDE05G1557 Ceratophyllum demersum
Cfa018832 Carpinus fangiana
Ciclev10022591m.g Citrus clementina
CiPaw.06G077300 Carya illinoinensis
CiPaw.11G008400 Carya illinoinensis
CiPaw.12G042500 Carya illinoinensis
ClCG06G017840 Citrullus lanatus
COL.COLO4_28098 Corchorus olitorius
Cpa.g.sc13.128 Carica papaya
Cre02.g097334 Chlamydomonas reinhardtii
CsaV3_1G000620 Cucumis sativus L.
CSS0046411 Camellia sinensis var. sinensis
DCAR_026226 Daucus carota
Dinv04882 Davidia involucrata
Dinv11165 Davidia involucrata
Dinv23136 Davidia involucrata
Duzib068G0304 Durio zibethinus
Duzib205G1407 Durio zibethinus
ECA232G0032 Erigeron canadensis
ECA247G2750 Erigeron canadensis
EL10As4g23391 Beta vulgaris
Eucgr.B00112 Eucalyptus grandis
FAN04G0012 Fragaria x ananassa
FAN08G3438 Fragaria x ananassa
FAN13G0393 Fragaria x ananassa
FAN18G3853 Fragaria x ananassa
FvH4_5g08180 Fragaria vesca
Glyma.05G047500 Glycine max
Glyma.17G129300 Glycine max
Gohir.A09G246700 Gossypium hirsutum
Gohir.A09G247250 Gossypium hirsutum
Gohir.A11G036100 Gossypium hirsutum
Gohir.D01G081600 Gossypium hirsutum
Gohir.D07G062100 Gossypium hirsutum
Gohir.D08G258600 Gossypium hirsutum
Gohir.D09G247201 Gossypium hirsutum
Gohir.D09G248000 Gossypium hirsutum
Gohir.D11G039650 Gossypium hirsutum
Gohir.D11G291800 Gossypium hirsutum
Gorai.004G275800 Gossypium raimondii
Gorai.006G271700 Gossypium raimondii
Gorai.007G042600 Gossypium raimondii
Gorai.007G057300 Gossypium raimondii
GSVIVG01008533001 Vitis vinifera
HanXRQChr07g0193231 Helianthus annuus
HanXRQChr09g0273101 Helianthus annuus
Haze_07225 Corylus avellana
Hma1.2p1_2767F.1_g328170 Hydrangea macrophylla
HPP92_001413 Vanilla planifolia
HPP92_001420 Vanilla planifolia
Hund02437 Selenicereus undatus
Lalb_Chr12g0202181 Lupinus albus
Lalb_Chr13g0297281 Lupinus albus
Lj4g0014142 Lotus japonicus
Lj9A478G96 Lonicera japonica
Lsat_1_v5_gn_1_29040 Lactuca sativa
Lsat_1_v5_gn_4_80380 Lactuca sativa
Lsat_1_v5_gn_5_95420 Lactuca sativa
Manes.06G118800 Manihot esculenta
Manes.14G051700 Manihot esculenta
Mapoly0121s0035 Marchantia polymorpha
MBI07_g34620_MAGBIO Magnolia biondii
MCO04G144 Micromonas commoda
MD06G1142800 Malus domestica
MD14G1158000 Malus domestica
Medtr4g103580 Medicago truncatula
MELO3C026211.2 Cucumis melo
Migut.D01264 Erythranthe guttata
Migut.I00501 Erythranthe guttata
MSTRG.11279 Avicennia marina
MSTRG.4598 Avicennia marina
Nitab4.5_0003005g0020 Nicotiana tabacum
Nitab4.5_0016919g0010 Nicotiana tabacum
Nn3g16487 Nelumbo nucifera
Oeu018539.1 Olea europaea
Oeu037712.1 Olea europaea
Oeu056013.1 Olea europaea
Os11g0483600 Oryza sativa ssp. japonica
Os12g0442900 Oryza sativa ssp. japonica
PGR083G0131 Punica granatum
PGSC0003DMG400015243 Solanum tuberosum
Phvul.003G210400 Phaseolus vulgaris
Potri.012G096900 Populus trichocarpa
Potri.015G094600 Populus trichocarpa
Pp3c8_10310 Physcomitrium patens
PRCOL_00006426 Prasinoderma coloniale
Prupe.5G152100 Prunus persica
Psat0s2546g0040 Pisum sativum
PSO017G7268 Papaver somniferum
PSO063G5502 Papaver somniferum
PSO478G0696 Papaver somniferum
PSO782G2667 Papaver somniferum
QL10p003733 Quercus lobata
RcHm_v2.0_Chr7g0190331 Rosa chinensis
Rhsim08G0189300 Rhododendron simsii
Sabra12G0070900 Salix brachista
Sabra15G0116000 Salix brachista
SalBow1G5982 Salvia bowleyana
SalBow1G7483 Salvia bowleyana
Sc04g0000700 Simmondsia chinensis
Sed0011812 Sechium edule
SEGI_01314 Sequoiadendron giganteum
SEGI_27141 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37795 Striga asiatica
SGA_v2.0_scaffold215G42324 Striga asiatica
SMO334G0034 Selaginella moellendorffii
Solyc03g111270.2 Solanum lycopersicum
Sopen03g030400 Solanum pennellii
Sp2g26540 Schrenkiella parvula
TAR622G0157 Trochodendron aralioides
THA.LOC104798947 Tarenaya hassleriana
THA.LOC104818187 Tarenaya hassleriana
Thecc.03G128000 Theobroma cacao
Thhalv10005047m.g Eutrema salsugineum
TPR.G19215 Trifolium pratense
TWI23G0043 Tripterygium wilfordii
TWI39G0602 Tripterygium wilfordii
unitig_0.g1072 Utricularia gibba
unitig_61.g26197 Utricularia gibba
vmacro16676 Vaccinium macrocarpon
vmacro19200 Vaccinium macrocarpon
VMungo1215G0874 Vigna mungo
Zm00001eb169640 Zea mays

User provided reference genes

Program Settings