Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p12810 Brassica napus
A09p67630 Brassica napus
A10p03360 Brassica napus
Aa31LG1G19930 Aethionema arabicum
Aa31LG5G4490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.484 Anthoceros agrestis
Actinidia15855 Actinidia chinensis
Actinidia21578 Actinidia chinensis
AL1G14650 Arabidopsis lyrata
AL4G28340 Arabidopsis lyrata
Aqoxy1G00133 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea
AT1G04930 Arabidopsis thaliana
AT2G32840 Arabidopsis thaliana
ATR0598G164 Amborella trichopoda
Atru.chr11.2695 Acer truncatum
Atru.chr4.1464 Acer truncatum
AUR62015612 Chenopodium quinoa
BcaB01g00977 Brassica carinata
BcaB02g10501 Brassica carinata
BcaB03g16451 Brassica carinata
BcaB03g16452 Brassica carinata
BcaB03g16453 Brassica carinata
BcaB03g16454 Brassica carinata
BolC4t23220H Brassica oleracea
BolC5t29090H Brassica oleracea
BraA05t20219Z Brassica rapa
BraA10t42612Z Brassica rapa
C04p16720 Brassica napus
C05p03080 Brassica napus
CAN.G261.6 Capsicum annuum
CANSAT11G0505 Cannabis sativa
CARHR004330 Cardamine hirsuta
CARHR126790 Cardamine hirsuta
Carub.0004s1427 Capsella rubella
Ca_02951_v3 Cicer arietinum L.
CBR_g45842 Chara braunii
Cc02_g27070 Coffea canephora
CDE04G0753 Ceratophyllum demersum
CDE06G1226 Ceratophyllum demersum
Cfa004806 Carpinus fangiana
Ciclev10032226m.g Citrus clementina
CiPaw.13G000800 Carya illinoinensis
ClCG10G012660 Citrullus lanatus
COL.COLO4_25137 Corchorus olitorius
Cpa.g.sc189.17 Carica papaya
CsaV3_3G032460 Cucumis sativus L.
CSS0015862 Camellia sinensis var. sinensis
CSS0038538 Camellia sinensis var. sinensis
DCAR_024991 Daucus carota
Dinv43491 Davidia involucrata
Dinv43931 Davidia involucrata
Duzib114G0283 Durio zibethinus
ECA248G0029 Erigeron canadensis
EL10Ac8g20283 Beta vulgaris
Eucgr.G03409 Eucalyptus grandis
FAN01G0312 Fragaria x ananassa
FAN01G2076 Fragaria x ananassa
FAN03G1097 Fragaria x ananassa
FAN06G2494 Fragaria x ananassa
FAN10G2396 Fragaria x ananassa
FvH4_7g00160 Fragaria vesca
Glyma.08G148900 Glycine max
Glyma.15G269200 Glycine max
Gohir.A08G026720 Gossypium hirsutum
Gohir.D08G037401 Gossypium hirsutum
Gorai.004G035400 Gossypium raimondii
GSVIVG01001367001 Vitis vinifera
HanXRQChr01g0018661 Helianthus annuus
HanXRQChr11g0341641 Helianthus annuus
HanXRQChr11g0341651 Helianthus annuus
HanXRQChr11g0341671 Helianthus annuus
HanXRQChr11g0341871 Helianthus annuus
Haze_10406 Corylus avellana
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla
Hma1.2p1_3637F.1_g337120 Hydrangea macrophylla
HPP92_020314 Vanilla planifolia
Hund25510 Selenicereus undatus
Lalb_Chr03g0033881 Lupinus albus
Lalb_Chr25g0283541 Lupinus albus
Lj3g0011601 Lotus japonicus
Lj7A564G31 Lonicera japonica
Lsat_1_v5_gn_1_110881 Lactuca sativa
Manes.10G151100 Manihot esculenta
Mapoly0040s0118 Marchantia polymorpha
MBI19_g23208_MAGBIO Magnolia biondii
MD02G1318600 Malus domestica
MD07G1002600 Malus domestica
Medtr2g060910 Medicago truncatula
Medtr4g125960 Medicago truncatula
MELO3C030929.2 Cucumis melo
Migut.N01664 Erythranthe guttata
MSTRG.5000 Avicennia marina
Nitab4.5_0000892g0140 Nicotiana tabacum
Nitab4.5_0005278g0010 Nicotiana tabacum
Nn2g15712 Nelumbo nucifera
Oeu013586.1 Olea europaea
Oeu024926.1 Olea europaea
Oeu053533.1 Olea europaea
Os03g0234600 Oryza sativa ssp. japonica
Peaxi162Scf00878g00036 Petunia axillaris
PGR119G0958 Punica granatum
PGSC0003DMG400006329 Solanum tuberosum
Phvul.005G039900 Phaseolus vulgaris
Potri.001G229800 Populus trichocarpa
Pp3c22_21740 Physcomitrium patens
Prupe.2G004100 Prunus persica
PSO339G6120 Papaver somniferum
PSO384G4128 Papaver somniferum
QL04p000066 Quercus lobata
QL04p003160 Quercus lobata
RcHm_v2.0_Chr1g0313411 Rosa chinensis
Rhsim01G0134400 Rhododendron simsii
Rhsim06G0015600 Rhododendron simsii
Sabra16G0137200 Salix brachista
Sabra16G0137400 Salix brachista
Sabra16G0137500 Salix brachista
SalBow4G1354 Salvia bowleyana
SalBow4G3044 Salvia bowleyana
Sc17g0006850 Simmondsia chinensis
Sed0003173 Sechium edule
Sed0010000 Sechium edule
SEGI_00614 Sequoiadendron giganteum
SEGI_17188 Sequoiadendron giganteum
SEGI_38326 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28775 Striga asiatica
SMO137G0159 Selaginella moellendorffii
Solyc01g073920.3 Solanum lycopersicum
Sopen01g033490 Solanum pennellii
Sp1g03770 Schrenkiella parvula
Sp4g15220 Schrenkiella parvula
TAR369G0809 Trochodendron aralioides
TAR623G0394 Trochodendron aralioides
THA.LOC104801020 Tarenaya hassleriana
THA.LOC104816029 Tarenaya hassleriana
Thecc.01G416300 Theobroma cacao
Thhalv10009331m.g Eutrema salsugineum
Thhalv10009447m.g Eutrema salsugineum
Thhalv10016920m.g Eutrema salsugineum
TPR.G11699 Trifolium pratense
TWI09G1281 Tripterygium wilfordii
TWI73G1095 Tripterygium wilfordii
unitig_22.g5889 Utricularia gibba
vmacro12585 Vaccinium macrocarpon
vmacro21156 Vaccinium macrocarpon
vmacro21157 Vaccinium macrocarpon
vmacro21158 Vaccinium macrocarpon
VMungo1080G0080 Vigna mungo
Zm00001eb399260 Zea mays

User provided reference genes

Program Settings