Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08080 Brassica napus
Aa31LG11G12660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.508 Anthoceros agrestis
Actinidia28798 Actinidia chinensis
Ah.13g070610 Amaranthus hybridus
Ah.13g070620 Amaranthus hybridus
AL6G27940 Arabidopsis lyrata
Aqoxy2G04179 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FH3EPN Arachis hypogaea
AT5G16940 Arabidopsis thaliana
ATR0753G109 Amborella trichopoda
Atru.chr1.1951 Acer truncatum
AUR62006043 Chenopodium quinoa
AUR62006044 Chenopodium quinoa
AUR62035584 Chenopodium quinoa
AUR62035585 Chenopodium quinoa
BcaB01g04965 Brassica carinata
BcaB01g05238 Brassica carinata
BolC3t13429H Brassica oleracea
BraA03t10133Z Brassica rapa
C03p09350 Brassica napus
CAN.G222.65 Capsicum annuum
CANSAT64G2411 Cannabis sativa
CARHR196230 Cardamine hirsuta
Carub.0006s1515 Capsella rubella
Ca_17087_v3 Cicer arietinum L.
Cc07_g13240 Coffea canephora
Cfa007787 Carpinus fangiana
Cfa007788 Carpinus fangiana
Cfa007789 Carpinus fangiana
Ciclev10013082m.g Citrus clementina
Ciclev10013505m.g Citrus clementina
CiPaw.03G073900 Carya illinoinensis
CiPaw.03G074000 Carya illinoinensis
ClCG03G008860 Citrullus lanatus
ClCG08G009070 Citrullus lanatus
COL.COLO4_17898 Corchorus olitorius
Cpa.g.sc116.75 Carica papaya
CsaV3_5G023900 Cucumis sativus L.
CsaV3_6G036070 Cucumis sativus L.
CSS0001998 Camellia sinensis var. sinensis
DCAR_011635 Daucus carota
Duzib133G0699 Durio zibethinus
ECA238G2739 Erigeron canadensis
EL10Ac3g05220 Beta vulgaris
Eucgr.F02876 Eucalyptus grandis
Eucgr.F02877 Eucalyptus grandis
FAN10G2899 Fragaria x ananassa
FAN16G2823 Fragaria x ananassa
FAN19G2011 Fragaria x ananassa
FAN23G2495 Fragaria x ananassa
FAN28G0301 Fragaria x ananassa
FvH4_1g27730 Fragaria vesca
FvH4_1g30100 Fragaria vesca
Glyma.11G214900 Glycine max
Glyma.11G215100 Glycine max
Glyma.18G041500 Glycine max
Glyma.18G041600 Glycine max
Gohir.A04G085566 Gossypium hirsutum
Gohir.A06G089850 Gossypium hirsutum
Gohir.A08G229800 Gossypium hirsutum
Gohir.A08G229900 Gossypium hirsutum
Gohir.A10G199166 Gossypium hirsutum
Gohir.D06G065233 Gossypium hirsutum
Gohir.D08G250200 Gossypium hirsutum
Gohir.D08G250250 Gossypium hirsutum
Gohir.D08G250300 Gossypium hirsutum
Gorai.004G266800 Gossypium raimondii
Gorai.004G266900 Gossypium raimondii
Gorai.004G267000 Gossypium raimondii
GSVIVG01021786001 Vitis vinifera
HanXRQChr14g0444631 Helianthus annuus
HanXRQChr15g0482911 Helianthus annuus
Haze_14284 Corylus avellana
Hma1.2p1_0158F.1_g070040 Hydrangea macrophylla
Lalb_Chr15g0085011 Lupinus albus
Lj1P958T70 Lonicera japonica
Lj2C517G6 Lonicera japonica
Lj2C517T7 Lonicera japonica
Lj6g0022987 Lotus japonicus
Lsat_1_v5_gn_2_68260 Lactuca sativa
Lsat_1_v5_gn_3_63921 Lactuca sativa
Manes.01G120100 Manihot esculenta
Mapoly0175s0005 Marchantia polymorpha
MBI19_g44856_MAGBIO Magnolia biondii
MD09G1269100 Malus domestica
MD09G1269600 Malus domestica
MD09G1269800 Malus domestica
MD17G1267500 Malus domestica
MD17G1267700 Malus domestica
Medtr3g065140 Medicago truncatula
MELO3C022822.2 Cucumis melo
MELO3C026504.2 Cucumis melo
Migut.H02231 Erythranthe guttata
MSTRG.11286 Avicennia marina
MSTRG.11290 Avicennia marina
Nitab4.5_0001650g0010 Nicotiana tabacum
Nitab4.5_0006562g0060 Nicotiana tabacum
Nn3g18375 Nelumbo nucifera
Oeu062709.1 Olea europaea
Oeu062710.1 Olea europaea
Os09g0397700 Oryza sativa ssp. japonica
Peaxi162Scf00464g00013 Petunia axillaris
Peaxi162Scf00464g00014 Petunia axillaris
PGR004G0557 Punica granatum
PGSC0003DMG400013239 Solanum tuberosum
Phvul.001G229100 Phaseolus vulgaris
Potri.017G131900 Populus trichocarpa
Potri.017G132000 Populus trichocarpa
Potri.017G132500 Populus trichocarpa
Pp3c3_1640 Physcomitrium patens
PRCOL_00006023 Prasinoderma coloniale
Prupe.3G165600 Prunus persica
Psat5g119920 Pisum sativum
Psat5g119960 Pisum sativum
Psat5g120000 Pisum sativum
PSO017G6719 Papaver somniferum
QL02p059388 Quercus lobata
QL02p059397 Quercus lobata
RcHm_v2.0_Chr3g0491661 Rosa chinensis
RcHm_v2.0_Chr3g0491691 Rosa chinensis
RcHm_v2.0_Chr3g0491731 Rosa chinensis
RcHm_v2.0_Chr3g0491901 Rosa chinensis
Sabra17G0109800 Salix brachista
Sabra17G0109900 Salix brachista
SalBow3G4470 Salvia bowleyana
Sc11g0004600 Simmondsia chinensis
Sed0017700 Sechium edule
SEGI_33705 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30967 Striga asiatica
SMO134G0172 Selaginella moellendorffii
SMO134G0286 Selaginella moellendorffii
SMO182G0004 Selaginella moellendorffii
Solyc11g011450.2 Solanum lycopersicum
Sopen11g006240 Solanum pennellii
TAR622G1008 Trochodendron aralioides
THA.LOC104820884 Tarenaya hassleriana
Thecc.04G063500 Theobroma cacao
Thecc.K0008300 Theobroma cacao
Thhalv10016053m.g Eutrema salsugineum
TPR.G23209 Trifolium pratense
TWI53G1907 Tripterygium wilfordii
unitig_699.g19298 Utricularia gibba
vmacro18525 Vaccinium macrocarpon
VMungo1383G1490 Vigna mungo
Zm00001eb099170 Zea mays
Zm00001eb099180 Zea mays
Zm00001eb099190 Zea mays
Zm00001eb099200 Zea mays
Zm00001eb099210 Zea mays

User provided reference genes

Program Settings