Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42440 Brassica napus
A06p37630 Brassica napus
Aa31LG11G9060 Aethionema arabicum
Actinidia08545 Actinidia chinensis
Actinidia19810 Actinidia chinensis
Ah.04g159880 Amaranthus hybridus
Ah.04g159890 Amaranthus hybridus
Ah.04g159900 Amaranthus hybridus
AL3G15330 Arabidopsis lyrata
AL3G15510 Arabidopsis lyrata
AL6G39740 Arabidopsis lyrata
Aqoxy2G03170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea
AT3G05130 Arabidopsis thaliana
AT5G27330 Arabidopsis thaliana
Atru.chr2.532 Acer truncatum
AUR62000899 Chenopodium quinoa
AUR62005075 Chenopodium quinoa
BcaC01g00704 Brassica carinata
BcaC05g29999 Brassica carinata
BcaNung02477 Brassica carinata
BcaNung04359 Brassica carinata
BcaNung04360 Brassica carinata
BolC3t20618H Brassica oleracea
BolC5t34868H Brassica oleracea
BolC7t44596H Brassica oleracea
BraA05t23008Z Brassica rapa
BraA06t26683Z Brassica rapa
C05p62100 Brassica napus
C07p40590 Brassica napus
CAN.G1329.24 Capsicum annuum
CAN.G65.101 Capsicum annuum
CAN.G652.6 Capsicum annuum
CAN.G909.12 Capsicum annuum
CANSAT54G1324 Cannabis sativa
CARHR079450 Cardamine hirsuta
CARHR162300 Cardamine hirsuta
CARHR185930 Cardamine hirsuta
Carub.0003s0437 Capsella rubella
Carub.0006s2521 Capsella rubella
Ca_10079_v3 Cicer arietinum L.
Cc02_g32730 Coffea canephora
Cfa006523 Carpinus fangiana
Ciclev10000602m.g Citrus clementina
CiPaw.07G012700 Carya illinoinensis
CiPaw.08G168100 Carya illinoinensis
ClCG02G016160 Citrullus lanatus
COL.COLO4_13559 Corchorus olitorius
COL.COLO4_23513 Corchorus olitorius
Cpa.g.sc84.119 Carica papaya
CsaV3_2G004820 Cucumis sativus L.
CSS0000935 Camellia sinensis var. sinensis
DCAR_029454 Daucus carota
Dinv40234 Davidia involucrata
Duzib177G0588 Durio zibethinus
ECA233G0604 Erigeron canadensis
ECA246G1289 Erigeron canadensis
Eucgr.B02029 Eucalyptus grandis
FAN02G0211 Fragaria x ananassa
FAN05G2617 Fragaria x ananassa
FAN05G5260 Fragaria x ananassa
FAN09G1938 Fragaria x ananassa
FAN14G0846 Fragaria x ananassa
FvH4_6g04961 Fragaria vesca
Glyma.10G157900 Glycine max
Glyma.19G085166 Glycine max
Glyma.20G230700 Glycine max
Gohir.A08G212800 Gossypium hirsutum
Gohir.A11G260600 Gossypium hirsutum
Gohir.D08G229800 Gossypium hirsutum
Gohir.D11G270900 Gossypium hirsutum
Gorai.004G244000 Gossypium raimondii
Gorai.007G291400 Gossypium raimondii
GSVIVG01022015001 Vitis vinifera
HanXRQChr05g0158391 Helianthus annuus
HanXRQChr15g0493471 Helianthus annuus
Haze_04263 Corylus avellana
Haze_23464 Corylus avellana
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla
Lalb_Chr02g0148481 Lupinus albus
Lalb_Chr18g0045421 Lupinus albus
Lj5g0013750 Lotus japonicus
Lj8C55T14 Lonicera japonica
Lj8C55T15 Lonicera japonica
Lj9P678T27 Lonicera japonica
Lsat_1_v5_gn_4_137721 Lactuca sativa
Lsat_1_v5_gn_5_38100 Lactuca sativa
Manes.08G124600 Manihot esculenta
Manes.09G161700 Manihot esculenta
MBI02_g44920_MAGBIO Magnolia biondii
MBI18_g16961_MAGBIO Magnolia biondii
MD04G1212300 Malus domestica
MD12G1227100 Malus domestica
Medtr1g082215 Medicago truncatula
MELO3C004316.2 Cucumis melo
Migut.A01112 Erythranthe guttata
MSTRG.12109 Avicennia marina
Nitab4.5_0000003g0420 Nicotiana tabacum
Nitab4.5_0008768g0010 Nicotiana tabacum
Nn4g26097 Nelumbo nucifera
Nn4g26098 Nelumbo nucifera
Oeu019603.1 Olea europaea
Oeu020434.1 Olea europaea
Peaxi162Scf00016g10236 Petunia axillaris
Peaxi162Scf00351g00525 Petunia axillaris
Peaxi162Scf00351g00530 Petunia axillaris
Peaxi162Scf00413g00515 Petunia axillaris
Peaxi162Scf00413g00516 Petunia axillaris
PGR083G0910 Punica granatum
PGSC0003DMG400001646 Solanum tuberosum
Phvul.007G183300 Phaseolus vulgaris
Potri.005G040500 Populus trichocarpa
Potri.013G028600 Populus trichocarpa
Prupe.6G332700 Prunus persica
Psat6g148400 Pisum sativum
PSO151G0007 Papaver somniferum
PSO151G0084 Papaver somniferum
PSO151G0141 Papaver somniferum
PSO170G6876 Papaver somniferum
PSO302G0039 Papaver somniferum
PSO384G5055 Papaver somniferum
QL01p001837 Quercus lobata
QL03p002854 Quercus lobata
QL03p003582 Quercus lobata
RcHm_v2.0_Chr3g0453461 Rosa chinensis
Rhsim05G0146200 Rhododendron simsii
Sabra05G0039600 Salix brachista
Sabra13G0028900 Salix brachista
SalBow6G2889 Salvia bowleyana
Sc06g0003440 Simmondsia chinensis
Sed0008414 Sechium edule
SGA_v2.0_scaffold104G30165 Striga asiatica
SHI18226 Sapria himalayana
Solyc01g110960.4 Solanum lycopersicum
Sopen01g053000 Solanum pennellii
Sp2g20550 Schrenkiella parvula
Sp3g03950 Schrenkiella parvula
TAR362G1085 Trochodendron aralioides
THA.LOC104818671 Tarenaya hassleriana
THA.LOC104821702 Tarenaya hassleriana
Thecc.05G297900 Theobroma cacao
Thhalv10003823m.g Eutrema salsugineum
TPR.G2744 Trifolium pratense
TWI56G0946 Tripterygium wilfordii
unitig_22.g6242 Utricularia gibba
unitig_8.g3020 Utricularia gibba
VMungo0720G2495 Vigna mungo

User provided reference genes

Program Settings