Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26140 Brassica napus
A05p11610 Brassica napus
Aa31LG9G13860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2942 Anthoceros agrestis
Actinidia07625 Actinidia chinensis
Ah.05g178940 Amaranthus hybridus
AL4G29930 Arabidopsis lyrata
Aqoxy1G02218 Aquilegia oxysepala
AT2G34050 Arabidopsis thaliana
ATR0712G057 Amborella trichopoda
Atru.chr10.1743 Acer truncatum
AUR62014920 Chenopodium quinoa
AUR62031127 Chenopodium quinoa
BcaB01g03906 Brassica carinata
BcaB02g10610 Brassica carinata
BcaB06g28727 Brassica carinata
BcaB06g28732 Brassica carinata
BcaC01g03531 Brassica carinata
BcaC01g04260 Brassica carinata
BcaC01g05809 Brassica carinata
BcaC02g07783 Brassica carinata
BolC3t14602H Brassica oleracea
BolC4t23082H Brassica oleracea
BolC4t27823H Brassica oleracea
BraA04t18117Z Brassica rapa
BraA05t20108Z Brassica rapa
C03p13910 Brassica napus
C03p43360 Brassica napus
C04p15060 Brassica napus
C04p63520 Brassica napus
CAN.G160.23 Capsicum annuum
CAN.G1961.2 Capsicum annuum
CANSAT35G1037 Cannabis sativa
CARHR128130 Cardamine hirsuta
Carub.0004s1568 Capsella rubella
Ca_10660_v3 Cicer arietinum L.
Ca_26043_v3 Cicer arietinum L.
CBR_g54210 Chara braunii
Cc02_g14330 Coffea canephora
CDE02G3849 Ceratophyllum demersum
Cfa000557 Carpinus fangiana
Cfa026726 Carpinus fangiana
Ciclev10016425m.g Citrus clementina
CiPaw.09G066500 Carya illinoinensis
ClCG01G023480 Citrullus lanatus
COL.COLO4_31383 Corchorus olitorius
Cpa.g.sc12.156 Carica papaya
Cpa.g.sc80.22 Carica papaya
Cpa.g.sc80.25 Carica papaya
Cre10.g437050 Chlamydomonas reinhardtii
CsaV3_6G050600 Cucumis sativus L.
DCAR_004027 Daucus carota
DCAR_007975 Daucus carota
DCAR_032321 Daucus carota
Dinv36435 Davidia involucrata
Dinv40630 Davidia involucrata
Duzib192G0917 Durio zibethinus
Duzib235G1063 Durio zibethinus
ECA236G4389 Erigeron canadensis
EL10Ac1g01008 Beta vulgaris
Eucgr.D00572 Eucalyptus grandis
FAN03G1929 Fragaria x ananassa
FAN06G4868 Fragaria x ananassa
FAN11G1044 Fragaria x ananassa
FAN16G1146 Fragaria x ananassa
FAN21G0445 Fragaria x ananassa
FAN25G0865 Fragaria x ananassa
FvH4_3g08250 Fragaria vesca
FvH4_7g02080 Fragaria vesca
Glyma.04G173800 Glycine max
Glyma.06G291400 Glycine max
Glyma.12G114600 Glycine max
Gohir.A05G157100 Gossypium hirsutum
Gohir.D01G045600 Gossypium hirsutum
Gohir.D05G160000 Gossypium hirsutum
Gorai.002G065200 Gossypium raimondii
Gorai.009G165000 Gossypium raimondii
GSVIVG01021153001 Vitis vinifera
HanXRQChr15g0481321 Helianthus annuus
Haze_06318 Corylus avellana
Hma1.2p1_0155F.1_g068520 Hydrangea macrophylla
HPP92_018237 Vanilla planifolia
Hund21192 Selenicereus undatus
Lalb_Chr07g0189681 Lupinus albus
Lj4g0024893 Lotus japonicus
Lj7P478G59 Lonicera japonica
Lsat_1_v5_gn_7_23761 Lactuca sativa
Manes.17G051900 Manihot esculenta
Mapoly0023s0159 Marchantia polymorpha
MBI07_g06434_MAGBIO Magnolia biondii
MCO09G652 Micromonas commoda
MD05G1306300 Malus domestica
MD10G1285300 Malus domestica
Medtr1g097870 Medicago truncatula
Medtr1g097880 Medicago truncatula
Medtr4g087955 Medicago truncatula
MELO3C007238.2 Cucumis melo
Migut.M01075 Erythranthe guttata
MSTRG.14155 Avicennia marina
Nitab4.5_0000138g0010 Nicotiana tabacum
Nitab4.5_0008952g0010 Nicotiana tabacum
Nn2g14559 Nelumbo nucifera
Oeu019523.1 Olea europaea
Oeu025561.1 Olea europaea
Oeu043091.1 Olea europaea
Oeu062327.1 Olea europaea
Os02g0312700 Oryza sativa ssp. japonica
Peaxi162Scf00016g00346 Petunia axillaris
Peaxi162Scf00367g00049 Petunia axillaris
PGR004G0415 Punica granatum
PGR046G0004 Punica granatum
Phvul.001G005700 Phaseolus vulgaris
Potri.004G052200 Populus trichocarpa
Pp3c14_19140 Physcomitrium patens
PRCOL_00005737 Prasinoderma coloniale
Prupe.4G056300 Prunus persica
Psat4g001400 Pisum sativum
PSO063G1259 Papaver somniferum
PSO541G3866 Papaver somniferum
PSO675G0526 Papaver somniferum
QL04p069154 Quercus lobata
QL04p069158 Quercus lobata
RcHm_v2.0_Chr5g0009901 Rosa chinensis
Rhsim02G0138400 Rhododendron simsii
Rhsim06G0035100 Rhododendron simsii
Sabra04G0033000 Salix brachista
Sc17g0005830 Simmondsia chinensis
Sed0013972 Sechium edule
Sed0019770 Sechium edule
SEGI_14350 Sequoiadendron giganteum
SEGI_15656 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07660 Striga asiatica
SGA_v2.0_scaffold341G49353 Striga asiatica
SHI18442 Sapria himalayana
SMO196G0025 Selaginella moellendorffii
Solyc02g031770.4 Solanum lycopersicum
Sopen02g010080 Solanum pennellii
Sp4g16400 Schrenkiella parvula
TAR624G0520 Trochodendron aralioides
TAR626G0293 Trochodendron aralioides
THA.LOC104812631 Tarenaya hassleriana
THA.LOC104814688 Tarenaya hassleriana
Thecc.06G177000 Theobroma cacao
Thhalv10017133m.g Eutrema salsugineum
TPR.G16259 Trifolium pratense
TPR.G17014 Trifolium pratense
TWI38G1999 Tripterygium wilfordii
unitig_60.g25415 Utricularia gibba
vmacro15953 Vaccinium macrocarpon
VMungo1127G0753 Vigna mungo
Zm00001eb237640 Zea mays

User provided reference genes

Program Settings