Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32170 Brassica napus
A06p04510 Brassica napus
A08p04740 Brassica napus
Aa31LG10G5370 Aethionema arabicum
Aa31LG8G4550 Aethionema arabicum
Actinidia34660 Actinidia chinensis
AL1G55008 Arabidopsis lyrata
AL1G55030 Arabidopsis lyrata
AL3G30800 Arabidopsis lyrata
Aqoxy3G04241 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03EXEF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C1QDUR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SE8RA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UCE8LX Arachis hypogaea
AT1G48405 Arabidopsis thaliana
AT3G17680 Arabidopsis thaliana
ATR0618G253 Amborella trichopoda
Atru.chr9.355 Acer truncatum
AUR62033077 Chenopodium quinoa
AUR62034040 Chenopodium quinoa
BcaB04g17430 Brassica carinata
BcaB04g17431 Brassica carinata
BcaB04g17432 Brassica carinata
BcaB04g17433 Brassica carinata
BcaB04g18959 Brassica carinata
BcaB06g25821 Brassica carinata
BcaB06g25823 Brassica carinata
BcaB07g33762 Brassica carinata
BcaC01g03740 Brassica carinata
BcaC07g37137 Brassica carinata
BcaC08g43034 Brassica carinata
BolC3t17188H Brassica oleracea
BolC5t33607H Brassica oleracea
BolC6t35415H Brassica oleracea
BolC6t35416H Brassica oleracea
BolC8t47321H Brassica oleracea
BraA05t22046Z Brassica rapa
BraA06t23655Z Brassica rapa
BraA08t32503Z Brassica rapa
C03p49080 Brassica napus
C05p48710 Brassica napus
C06p02850 Brassica napus
C06p02890 Brassica napus
C06p02940 Brassica napus
C08p05110 Brassica napus
CAN.G1909.1 Capsicum annuum
CAN.G65.77 Capsicum annuum
CANSAT01G3029 Cannabis sativa
CARHR038020 Cardamine hirsuta
CARHR093030 Cardamine hirsuta
Carub.0001s3752 Capsella rubella
Carub.0003s1741 Capsella rubella
Ca_00018_v3 Cicer arietinum L.
Cc00_g18770 Coffea canephora
CDE02G0066 Ceratophyllum demersum
CDE04G0293 Ceratophyllum demersum
CDE05G0351 Ceratophyllum demersum
CDE05G3589 Ceratophyllum demersum
Cfa017790 Carpinus fangiana
Ciclev10020883m.g Citrus clementina
CiPaw.16G072100 Carya illinoinensis
ClCG04G012590 Citrullus lanatus
Cpa.g.sc111.44 Carica papaya
CsaV3_1G005110 Cucumis sativus L.
DCAR_010223 Daucus carota
DCAR_013999 Daucus carota
DCAR_023254 Daucus carota
Dinv06632 Davidia involucrata
ECA233G1753 Erigeron canadensis
EL10Ac8g19437 Beta vulgaris
Eucgr.K02309 Eucalyptus grandis
FAN04G2831 Fragaria x ananassa
FAN08G0951 Fragaria x ananassa
FAN13G3100 Fragaria x ananassa
FAN18G2684 Fragaria x ananassa
FvH4_5g18280 Fragaria vesca
Glyma.09G166300 Glycine max
Glyma.16G216300 Glycine max
GSVIVG01029368001 Vitis vinifera
HanXRQChr12g0367661 Helianthus annuus
HanXRQChr13g0387291 Helianthus annuus
Haze_18425 Corylus avellana
Hma1.2p1_0983F.1_g244060 Hydrangea macrophylla
HPP92_008286 Vanilla planifolia
Hund22396 Selenicereus undatus
Lalb_Chr22g0353851 Lupinus albus
Lalb_Chr22g0353861 Lupinus albus
Lalb_Chr24g0398491 Lupinus albus
Lj1g0019516 Lotus japonicus
Lj2g0012075 Lotus japonicus
Lj5P166T67 Lonicera japonica
Lj9A350G57 Lonicera japonica
Lj9C413T11 Lonicera japonica
Lsat_1_v5_gn_8_31480 Lactuca sativa
Manes.02G214000 Manihot esculenta
MBI03_g05108_MAGBIO Magnolia biondii
MD06G1238400 Malus domestica
MD14G1244700 Malus domestica
Medtr6g081040 Medicago truncatula
MELO3C001949.2 Cucumis melo
Migut.D02060 Erythranthe guttata
MSTRG.4322 Avicennia marina
MSTRG.9710 Avicennia marina
Nitab4.5_0000782g0200 Nicotiana tabacum
Nitab4.5_0002049g0020 Nicotiana tabacum
Nitab4.5_0004612g0040 Nicotiana tabacum
Nn4g24904 Nelumbo nucifera
Oeu023547.1 Olea europaea
Oeu038486.1 Olea europaea
Oeu061193.1 Olea europaea
Os03g0110500 Oryza sativa ssp. japonica
Peaxi162Scf00171g00315 Petunia axillaris
Peaxi162Scf00643g00061 Petunia axillaris
PGR044G0656 Punica granatum
PGR083G2189 Punica granatum
PGSC0003DMG400010158 Solanum tuberosum
PGSC0003DMG400021951 Solanum tuberosum
PGSC0003DMG400027049 Solanum tuberosum
Phvul.004G141900 Phaseolus vulgaris
Potri.012G038000 Populus trichocarpa
Potri.015G030100 Populus trichocarpa
Prupe.5G242300 Prunus persica
Psat1g120680 Pisum sativum
PSO063G6227 Papaver somniferum
PSO782G5234 Papaver somniferum
QL03p069496 Quercus lobata
RcHm_v2.0_Chr7g0177301 Rosa chinensis
Sabra12G0026400 Salix brachista
Sabra15G0025100 Salix brachista
SalBow8G2727 Salvia bowleyana
Sed0023393 Sechium edule
SGA_v2.0_scaffold164G38115 Striga asiatica
SGA_v2.0_scaffold335G49119 Striga asiatica
Solyc03g098450.3 Solanum lycopersicum
Solyc06g072290.3 Solanum lycopersicum
Solyc09g018970.1 Solanum lycopersicum
Solyc10g037850.1 Solanum lycopersicum
Sopen03g029190 Solanum pennellii
Sopen06g028660 Solanum pennellii
Sp1g35340 Schrenkiella parvula
Sp3g15820 Schrenkiella parvula
TAR622G0944 Trochodendron aralioides
Thhalv10012064m.g Eutrema salsugineum
Thhalv10021085m.g Eutrema salsugineum
TPR.G24055 Trifolium pratense
TWI60G1404 Tripterygium wilfordii
TWI81G0707 Tripterygium wilfordii
unitig_0.g27 Utricularia gibba
unitig_37.g12835 Utricularia gibba
VMungo0464G0748 Vigna mungo
Zm00001eb404190 Zea mays

User provided reference genes

Program Settings