Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12070 Brassica napus
A08p31410 Brassica napus
A09p61040 Brassica napus
Aa31LG7G620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4109 Anthoceros agrestis
Actinidia08937 Actinidia chinensis
Actinidia18259 Actinidia chinensis
Actinidia25464 Actinidia chinensis
Ah.01g002790 Amaranthus hybridus
AL1G28210 Arabidopsis lyrata
Aqoxy4G02614 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea
AT1G16040 Arabidopsis thaliana
ATR0568G024 Amborella trichopoda
Atru.chr1.2801 Acer truncatum
Atru.chr8.1159 Acer truncatum
AUR62012861 Chenopodium quinoa
AUR62034078 Chenopodium quinoa
BcaB02g06654 Brassica carinata
BcaB03g13048 Brassica carinata
BcaB03g14507 Brassica carinata
BcaC03g14995 Brassica carinata
BcaC05g25622 Brassica carinata
BcaC05g25623 Brassica carinata
BcaC07g38802 Brassica carinata
BolC5t30156H Brassica oleracea
BolC8t49364H Brassica oleracea
BraA06t24376Z Brassica rapa
BraA08t35064Z Brassica rapa
BraA09t41477Z Brassica rapa
C05p14240 Brassica napus
C08p17380 Brassica napus
CAN.G1235.23 Capsicum annuum
CAN.G1986.5 Capsicum annuum
CAN.G276.2 Capsicum annuum
CANSAT35G0550 Cannabis sativa
CARHR016550 Cardamine hirsuta
Carub.0001s1585 Capsella rubella
Ca_15577_v3 Cicer arietinum L.
CBR_g41678 Chara braunii
CBR_g48373 Chara braunii
Cc04_g05280 Coffea canephora
Cc04_g05650 Coffea canephora
CDE02G0643 Ceratophyllum demersum
Cfa001859 Carpinus fangiana
Cfa026120 Carpinus fangiana
Ciclev10026430m.g Citrus clementina
CiPaw.01G073400 Carya illinoinensis
CiPaw.02G163500 Carya illinoinensis
ClCG10G012810 Citrullus lanatus
COL.COLO4_24896 Corchorus olitorius
Cpa.g.sc14.108 Carica papaya
CsaV3_3G032650 Cucumis sativus L.
CSS0004145 Camellia sinensis var. sinensis
CSS0025832 Camellia sinensis var. sinensis
CSS0035645 Camellia sinensis var. sinensis
DCAR_025541 Daucus carota
Dinv23270 Davidia involucrata
Duzib192G0308 Durio zibethinus
ECA232G4560 Erigeron canadensis
EL10Ac4g09605 Beta vulgaris
Eucgr.F03982 Eucalyptus grandis
FAN02G2144 Fragaria x ananassa
FAN09G3573 Fragaria x ananassa
FAN09G4697 Fragaria x ananassa
FAN14G3036 Fragaria x ananassa
FvH4_6g28300 Fragaria vesca
Glyma.09G000800 Glycine max
Glyma.09G000900 Glycine max
Gohir.A05G117500 Gossypium hirsutum
Gohir.D05G118400 Gossypium hirsutum
Gorai.009G122300 Gossypium raimondii
GSVIVG01016107001 Vitis vinifera
HanXRQChr10g0298641 Helianthus annuus
HanXRQChr16g0499441 Helianthus annuus
HanXRQChr17g0561891 Helianthus annuus
Haze_16687 Corylus avellana
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla
HPP92_001544 Vanilla planifolia
Lalb_Chr13g0301111 Lupinus albus
Lj6g0018730 Lotus japonicus
Lsat_1_v5_gn_4_85101 Lactuca sativa
Manes.11G069000 Manihot esculenta
Mapoly0005s0096 Marchantia polymorpha
MBI19_g12142_MAGBIO Magnolia biondii
MCO15G581 Micromonas commoda
MD12G1013200 Malus domestica
MD14G1138800 Malus domestica
Medtr3g110270 Medicago truncatula
MELO3C000966.2 Cucumis melo
MELO3C028676.2 Cucumis melo
MELO3C032630.2 Cucumis melo
Migut.I00673 Erythranthe guttata
MSTRG.22808 Avicennia marina
Nitab4.5_0002700g0180 Nicotiana tabacum
Nitab4.5_0004738g0120 Nicotiana tabacum
Nn2g12451 Nelumbo nucifera
Nn2g14031 Nelumbo nucifera
Oeu004556.1 Olea europaea
Oeu035883.1 Olea europaea
Os03g0129000 Oryza sativa ssp. japonica
Os10g0200800 Oryza sativa ssp. japonica
Peaxi162Scf00314g01045 Petunia axillaris
PGR102G0155 Punica granatum
PGSC0003DMG400014153 Solanum tuberosum
PGSC0003DMG402014462 Solanum tuberosum
Phvul.009G194500 Phaseolus vulgaris
Potri.003G184701 Populus trichocarpa
Pp3c8_15970 Physcomitrium patens
Prupe.3G103300 Prunus persica
Psat5g020280 Pisum sativum
PSO017G2949 Papaver somniferum
PSO063G6564 Papaver somniferum
PSO724G0600 Papaver somniferum
PSO729G0217 Papaver somniferum
QL10p031453 Quercus lobata
RcHm_v2.0_Chr2g0132361 Rosa chinensis
Rhsim08G0203200 Rhododendron simsii
Sabra03G0135200 Salix brachista
SalBow8G2778 Salvia bowleyana
SalBow8G2909 Salvia bowleyana
SalBow8G3296 Salvia bowleyana
Sc05g0005820 Simmondsia chinensis
Sed0005872 Sechium edule
Sed0025979 Sechium edule
SEGI_14369 Sequoiadendron giganteum
SGA_v2.0_scaffold419G51286 Striga asiatica
SHI05687 Sapria himalayana
SMO351G0301 Selaginella moellendorffii
Solyc03g117650.4 Solanum lycopersicum
Solyc12g042530.2 Solanum lycopersicum
Sopen03g036560 Solanum pennellii
Sopen12g021620 Solanum pennellii
Sp1g14360 Schrenkiella parvula
TAR625G0238 Trochodendron aralioides
THA.LOC104808174 Tarenaya hassleriana
THA.LOC104812419 Tarenaya hassleriana
Thecc.06G046100 Theobroma cacao
Thhalv10008658m.g Eutrema salsugineum
TPR.G15094 Trifolium pratense
TPR.G7694 Trifolium pratense
TWI12G0375 Tripterygium wilfordii
unitig_62.g23577 Utricularia gibba
vmacro19072 Vaccinium macrocarpon
VMungo1309G0542 Vigna mungo
Zm00001eb002240 Zea mays
Zm00001eb403520 Zea mays

User provided reference genes

Program Settings