Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p09210 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis
Actinidia16409 Actinidia chinensis
Ah.03g140710 Amaranthus hybridus
AL8G43550 Arabidopsis lyrata
Aqoxy1G00260 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea
AT5G65840 Arabidopsis thaliana
ATR0739G073 Amborella trichopoda
ATR0739G130 Amborella trichopoda
ATR0739G160 Amborella trichopoda
Atru.chr3.1060 Acer truncatum
AUR62004032 Chenopodium quinoa
AUR62007540 Chenopodium quinoa
BcaB04g20033 Brassica carinata
BcaB04g20036 Brassica carinata
BcaC04g23243 Brassica carinata
BolC9t53970H Brassica oleracea
BraA09t36573Z Brassica rapa
C09p10750 Brassica napus
CAN.G775.1 Capsicum annuum
CANSAT01G2436 Cannabis sativa
CARHR279840 Cardamine hirsuta
Carub.0008s2673 Capsella rubella
Ca_22095_v3 Cicer arietinum L.
Cc07_g07360 Coffea canephora
CDE02G4371 Ceratophyllum demersum
Cfa004388 Carpinus fangiana
Ciclev10026314m.g Citrus clementina
CiPaw.01G001900 Carya illinoinensis
ClCG02G012210 Citrullus lanatus
COL.COLO4_11615 Corchorus olitorius
COL.COLO4_11616 Corchorus olitorius
Cpa.g.sc673.2 Carica papaya
Cre06.g278096 Chlamydomonas reinhardtii
Cre16.g649250 Chlamydomonas reinhardtii
Cre17.g697050 Chlamydomonas reinhardtii
CsaV3_2G016370 Cucumis sativus L.
CSS0005558 Camellia sinensis var. sinensis
DCAR_000455 Daucus carota
DCAR_014953 Daucus carota
Dinv26959 Davidia involucrata
Duzib147G0189 Durio zibethinus
ECA232G4556 Erigeron canadensis
EL10Ac6g15593 Beta vulgaris
Eucgr.H02332 Eucalyptus grandis
Eucgr.H02333 Eucalyptus grandis
FAN19G0182 Fragaria x ananassa
FAN19G2004 Fragaria x ananassa
FAN23G1748 Fragaria x ananassa
FAN23G2689 Fragaria x ananassa
FAN26G0787 Fragaria x ananassa
FAN26G1896 Fragaria x ananassa
FAN26G2723 Fragaria x ananassa
FAN28G0406 Fragaria x ananassa
FAN28G2407 Fragaria x ananassa
FvH4_1g18230 Fragaria vesca
FvH4_1g18250 Fragaria vesca
FvH4_1g18251 Fragaria vesca
Glyma.17G158400 Glycine max
Glyma.17G158500 Glycine max
Gohir.A10G089200 Gossypium hirsutum
Gohir.A12G080465 Gossypium hirsutum
Gohir.D10G098900 Gossypium hirsutum
Gohir.D12G076900 Gossypium hirsutum
Gorai.008G085700 Gossypium raimondii
Gorai.011G108500 Gossypium raimondii
GSVIVG01004399001 Vitis vinifera
GSVIVG01004400001 Vitis vinifera
GSVIVG01007167001 Vitis vinifera
GSVIVG01007168001 Vitis vinifera
GSVIVG01007444001 Vitis vinifera
GSVIVG01007445001 Vitis vinifera
HanXRQChr09g0262071 Helianthus annuus
Haze_02356 Corylus avellana
Haze_15025 Corylus avellana
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla
Hund16417 Selenicereus undatus
Lalb_Chr11g0075991 Lupinus albus
Lj4A165T49 Lonicera japonica
Lj4g0024725 Lotus japonicus
Lsat_1_v5_gn_4_160020 Lactuca sativa
Lsat_1_v5_gn_5_19140 Lactuca sativa
Manes.13G109000 Manihot esculenta
MBI16_g06077_MAGBIO Magnolia biondii
MCO06G061 Micromonas commoda
MCO07G374 Micromonas commoda
MCO14G127 Micromonas commoda
MD02G1189600 Malus domestica
Medtr4g097500 Medicago truncatula
MELO3C020846.2 Cucumis melo
Migut.L00430 Erythranthe guttata
Migut.L00432 Erythranthe guttata
Nitab4.5_0000036g0150 Nicotiana tabacum
Nitab4.5_0007379g0030 Nicotiana tabacum
Nn5g30667 Nelumbo nucifera
Oeu013340.1 Olea europaea
Oeu013341.1 Olea europaea
Os03g0729200 Oryza sativa ssp. japonica
Os03g0729300 Oryza sativa ssp. japonica
Peaxi162Scf00449g00417 Petunia axillaris
PGR102G2131 Punica granatum
PGSC0003DMG400003322 Solanum tuberosum
Phvul.003G232800 Phaseolus vulgaris
Phvul.003G232900 Phaseolus vulgaris
Potri.007G007201 Populus trichocarpa
Potri.014G012100 Populus trichocarpa
Pp3c27_7100 Physcomitrium patens
PRCOL_00004664 Prasinoderma coloniale
Prupe.6G216800 Prunus persica
Psat4g080360 Pisum sativum
PSO017G2694 Papaver somniferum
PSO017G2968 Papaver somniferum
PSO017G4293 Papaver somniferum
PSO170G3322 Papaver somniferum
PSO170G3850 Papaver somniferum
PSO170G4503 Papaver somniferum
QL02p069743 Quercus lobata
QL06p038908 Quercus lobata
QL06p038910 Quercus lobata
QL06p038930 Quercus lobata
RcHm_v2.0_Chr2g0108751 Rosa chinensis
RcHm_v2.0_Chr2g0108761 Rosa chinensis
RcHm_v2.0_Chr2g0108771 Rosa chinensis
Rhsim08G0090300 Rhododendron simsii
Sabra07G0005500 Salix brachista
Sabra14G0006700 Salix brachista
SalBow5G1886 Salvia bowleyana
Sc07g0000430 Simmondsia chinensis
Sed0017274 Sechium edule
SEGI_14750 Sequoiadendron giganteum
SGA_v2.0_scaffold79G25603 Striga asiatica
Sopen02g014680 Solanum pennellii
Sopen08g016900 Solanum pennellii
Sp2g28930 Schrenkiella parvula
TAR628G1580 Trochodendron aralioides
THA.LOC104827747 Tarenaya hassleriana
Thecc.01G076300 Theobroma cacao
Thecc.01G076400 Theobroma cacao
Thhalv10004770m.g Eutrema salsugineum
TWI74G1062 Tripterygium wilfordii
unitig_37.g11996 Utricularia gibba
vmacro18012 Vaccinium macrocarpon
VMungo0251G1412 Vigna mungo
VMungo0251G2665 Vigna mungo
Zm00001eb008210 Zea mays
Zm00001eb030360 Zea mays
Zm00001eb056030 Zea mays
Zm00001eb215580 Zea mays

User provided reference genes

Program Settings