Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12400 Brassica napus
A06p40200 Brassica napus
Aa31LG2G4180 Aethionema arabicum
Aa31LG9G16420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis
Actinidia26226 Actinidia chinensis
Actinidia38763 Actinidia chinensis
Actinidia38781 Actinidia chinensis
Ah.04g150570 Amaranthus hybridus
Ah.04g150580 Amaranthus hybridus
AL5G18870 Arabidopsis lyrata
Aqoxy3G03429 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea
AT3G29010 Arabidopsis thaliana
ATR0626G227 Amborella trichopoda
ATR0642G001 Amborella trichopoda
Atru.chr8.192 Acer truncatum
AUR62018412 Chenopodium quinoa
AUR62021031 Chenopodium quinoa
BcaB06g27359 Brassica carinata
BcaC06g33662 Brassica carinata
BolC4t26193H Brassica oleracea
BolC7t44312H Brassica oleracea
BraA04t16903Z Brassica rapa
BraA06t26934Z Brassica rapa
C04p46080 Brassica napus
C07p37910 Brassica napus
CAN.G199.5 Capsicum annuum
CANSAT56G1541 Cannabis sativa
CARHR152100 Cardamine hirsuta
CARHR262560 Cardamine hirsuta
Carub.0005s0760 Capsella rubella
Carub.0007s3626 Capsella rubella
Ca_02901_v3 Cicer arietinum L.
CBR_g58409 Chara braunii
Cc04_g16470 Coffea canephora
Cfa018930 Carpinus fangiana
Cfa022485 Carpinus fangiana
Ciclev10012474m.g Citrus clementina
CiPaw.11G045800 Carya illinoinensis
ClCG04G012190 Citrullus lanatus
COL.COLO4_22946 Corchorus olitorius
Cpa.g.sc179.53 Carica papaya
Cre01.g053750 Chlamydomonas reinhardtii
CsaV3_1G005570 Cucumis sativus L.
CSS0012692 Camellia sinensis var. sinensis
CSS0012742 Camellia sinensis var. sinensis
CSS0019190 Camellia sinensis var. sinensis
DCAR_015957 Daucus carota
DCAR_015961 Daucus carota
DCAR_026059 Daucus carota
Dinv37673 Davidia involucrata
Duzib205G1074 Durio zibethinus
ECA246G2050 Erigeron canadensis
EL10Ac3g07299 Beta vulgaris
Eucgr.B00520 Eucalyptus grandis
FAN03G1016 Fragaria x ananassa
FAN04G1144 Fragaria x ananassa
FAN06G0706 Fragaria x ananassa
FAN08G1694 Fragaria x ananassa
FAN10G0297 Fragaria x ananassa
FAN13G2234 Fragaria x ananassa
FAN18G3490 Fragaria x ananassa
FvH4_5g14790 Fragaria vesca
FvH4_7g07490 Fragaria vesca
Glyma.09G236600 Glycine max
Gohir.A07G066000 Gossypium hirsutum
Gohir.D07G070500 Gossypium hirsutum
Gorai.001G074400 Gossypium raimondii
GSVIVG01007990001 Vitis vinifera
HanXRQChr08g0236601 Helianthus annuus
HanXRQChr09g0247201 Helianthus annuus
HanXRQChr13g0408591 Helianthus annuus
HanXRQChr14g0437411 Helianthus annuus
Haze_07314 Corylus avellana
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla
HPP92_002574 Vanilla planifolia
HPP92_002576 Vanilla planifolia
Hund02640 Selenicereus undatus
Lalb_Chr23g0265041 Lupinus albus
Lj1g0024391 Lotus japonicus
Lj4A111T68 Lonicera japonica
Lj5C110T19 Lonicera japonica
Lsat_1_v5_gn_9_27040 Lactuca sativa
Manes.01G092400 Manihot esculenta
Mapoly0106s0015 Marchantia polymorpha
MBI05_g33757_MAGBIO Magnolia biondii
MBI05_g35466_MAGBIO Magnolia biondii
MCO14G534 Micromonas commoda
MD06G1194800 Malus domestica
MD14G1201800 Malus domestica
Medtr1g111380 Medicago truncatula
Medtr7g011040 Medicago truncatula
MELO3C001989.2 Cucumis melo
Migut.L00264 Erythranthe guttata
MSTRG.15680 Avicennia marina
Nitab4.5_0000121g0120 Nicotiana tabacum
Nitab4.5_0004528g0010 Nicotiana tabacum
Nitab4.5_0005170g0010 Nicotiana tabacum
Nitab4.5_0005170g0060 Nicotiana tabacum
Nn4g23203 Nelumbo nucifera
Oeu037787.1 Olea europaea
Oeu058311.1 Olea europaea
Os08g0435800 Oryza sativa ssp. japonica
Peaxi162Scf00106g00016 Petunia axillaris
Peaxi162Scf00241g00416 Petunia axillaris
PGR031G1409 Punica granatum
PGR083G1377 Punica granatum
PGSC0003DMG400026111 Solanum tuberosum
Phvul.008G037200 Phaseolus vulgaris
Potri.017G085100 Populus trichocarpa
Pp3c1_38790 Physcomitrium patens
Pp3c2_33530 Physcomitrium patens
Pp3s30_306 Physcomitrium patens
PRCOL_00000090 Prasinoderma coloniale
Prupe.5G195000 Prunus persica
Psat3g200280 Pisum sativum
PSO478G3309 Papaver somniferum
QL06p014871 Quercus lobata
QL06p014899 Quercus lobata
QL10p017218 Quercus lobata
RcHm_v2.0_Chr7g0181591 Rosa chinensis
Rhsim08G0070400 Rhododendron simsii
Sabra17G0075000 Salix brachista
Sc04g0002730 Simmondsia chinensis
Sc10g0007080 Simmondsia chinensis
Sed0011950 Sechium edule
SEGI_18610 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08101 Striga asiatica
SMO119G0486 Selaginella moellendorffii
SMO164G0178 Selaginella moellendorffii
Solyc06g065310.3 Solanum lycopersicum
Sopen06g023800 Solanum pennellii
Sp2g17640 Schrenkiella parvula
Sp7g02320 Schrenkiella parvula
TAR374G0666 Trochodendron aralioides
TAR622G0868 Trochodendron aralioides
THA.LOC104825807 Tarenaya hassleriana
Thecc.03G090400 Theobroma cacao
Thhalv10005292m.g Eutrema salsugineum
Thhalv10027886m.g Eutrema salsugineum
TPR.G33578 Trifolium pratense
TPR.G39201 Trifolium pratense
TWI34G1631 Tripterygium wilfordii
unitig_60.g25520 Utricularia gibba
vmacro05688 Vaccinium macrocarpon
vmacro18186 Vaccinium macrocarpon
VMungo1383G0755 Vigna mungo
Zm00001eb211140 Zea mays

User provided reference genes

Program Settings