Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p14680 Brassica napus
Aa31LG7G3360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis
Actinidia04812 Actinidia chinensis
Actinidia13428 Actinidia chinensis
Ah.11g047620 Amaranthus hybridus
AL1G31040 Arabidopsis lyrata
AL2G34040 Arabidopsis lyrata
Aqoxy3G03654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea
AT1G18600 Arabidopsis thaliana
AT1G74130 Arabidopsis thaliana
AT1G74140 Arabidopsis thaliana
ATR0827G189 Amborella trichopoda
Atru.chr9.517 Acer truncatum
AUR62021531 Chenopodium quinoa
AUR62039652 Chenopodium quinoa
BcaB07g31879 Brassica carinata
BcaC02g11039 Brassica carinata
BcaC05g25755 Brassica carinata
BcaC07g37986 Brassica carinata
BcaC08g46813 Brassica carinata
BcaC08g46817 Brassica carinata
BcaC08g46819 Brassica carinata
BolC4t23709H Brassica oleracea
BolC5t30387H Brassica oleracea
BolC6t39860H Brassica oleracea
BolC6t39861H Brassica oleracea
BolC6t39863H Brassica oleracea
BraA06t24593Z Brassica rapa
BraA07t28215Z Brassica rapa
C05p16860 Brassica napus
C06p48280 Brassica napus
CANSAT80G1354 Cannabis sativa
CARHR019220 Cardamine hirsuta
CARHR067290 Cardamine hirsuta
Carub.0001s1823 Capsella rubella
Carub.0002s2094 Capsella rubella
Carub.0002s2095 Capsella rubella
Cc00_g03370 Coffea canephora
CDE07G0469 Ceratophyllum demersum
Cfa019355 Carpinus fangiana
Ciclev10021158m.g Citrus clementina
CiPaw.12G009100 Carya illinoinensis
ClCG04G011680 Citrullus lanatus
Cpa.g.sc94.75 Carica papaya
CsaV3_1G006120 Cucumis sativus L.
CSS0022679 Camellia sinensis var. sinensis
DCAR_011562 Daucus carota
Dinv17434 Davidia involucrata
Dinv17436 Davidia involucrata
Duzib068G0428 Durio zibethinus
Duzib205G0531 Durio zibethinus
ECA246G3883 Erigeron canadensis
EL10Ac5g11159 Beta vulgaris
Eucgr.B00624 Eucalyptus grandis
FAN08G0411 Fragaria x ananassa
FAN08G1663 Fragaria x ananassa
FAN13G1644 Fragaria x ananassa
FAN13G1921 Fragaria x ananassa
FAN13G3071 Fragaria x ananassa
FAN18G1888 Fragaria x ananassa
FvH4_5g13610 Fragaria vesca
FvH4_5g13620 Fragaria vesca
FvH4_5g13640 Fragaria vesca
Glyma.05G019500 Glycine max
Glyma.17G080300 Glycine max
Gohir.A06G087200 Gossypium hirsutum
Gohir.A07G149500 Gossypium hirsutum
Gohir.A12G276800 Gossypium hirsutum
Gohir.D10G255500 Gossypium hirsutum
Gohir.D12G277800 Gossypium hirsutum
Gorai.008G298500 Gossypium raimondii
GSVIVG01008119001 Vitis vinifera
HanXRQChr05g0153521 Helianthus annuus
Haze_07746 Corylus avellana
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla
HPP92_019191 Vanilla planifolia
HPP92_019201 Vanilla planifolia
Hund02570 Selenicereus undatus
Lalb_Chr07g0178341 Lupinus albus
Lj4g0028183 Lotus japonicus
Lj9C439G11 Lonicera japonica
Lsat_1_v5_gn_5_22901 Lactuca sativa
Manes.14G087101 Manihot esculenta
Manes.14G087300 Manihot esculenta
Mapoly0086s0048 Marchantia polymorpha
MBI16_g10851_MAGBIO Magnolia biondii
MCO07G692 Micromonas commoda
MD14G1214000 Malus domestica
Medtr4g109700 Medicago truncatula
MELO3C002041.2 Cucumis melo
MELO3C034996.2 Cucumis melo
Migut.D01626 Erythranthe guttata
MSTRG.9592 Avicennia marina
Nitab4.5_0001797g0080 Nicotiana tabacum
Nitab4.5_0006506g0020 Nicotiana tabacum
Nn4g23471 Nelumbo nucifera
Oeu032097.2 Olea europaea
Os01g0763100 Oryza sativa ssp. japonica
Peaxi162Scf01223g00009 Petunia axillaris
PGR083G2541 Punica granatum
Phvul.003G183300 Phaseolus vulgaris
Potri.006G227300 Populus trichocarpa
Pp3c22_7870 Physcomitrium patens
Prupe.3G124800 Prunus persica
Prupe.5G207200 Prunus persica
Prupe.5G207300 Prunus persica
Psat0s3566g0040 Pisum sativum
PSO017G2617 Papaver somniferum
PSO017G5063 Papaver somniferum
PSO017G6704 Papaver somniferum
PSO478G4625 Papaver somniferum
QL10p019966 Quercus lobata
RcHm_v2.0_Chr1g0346931 Rosa chinensis
RcHm_v2.0_Chr1g0346941 Rosa chinensis
RcHm_v2.0_Chr4g0411161 Rosa chinensis
RcHm_v2.0_Chr6g0258631 Rosa chinensis
RcHm_v2.0_Chr6g0258651 Rosa chinensis
RcHm_v2.0_Chr6g0263661 Rosa chinensis
RcHm_v2.0_Chr7g0183321 Rosa chinensis
RcHm_v2.0_Chr7g0183341 Rosa chinensis
RcHm_v2.0_Chr7g0198541 Rosa chinensis
Rhsim08G0143800 Rhododendron simsii
Sabra06G0175900 Salix brachista
SalBow7G0217 Salvia bowleyana
SalBow7G1843 Salvia bowleyana
SalBow7G4422 Salvia bowleyana
SalBow7G4769 Salvia bowleyana
Sc04g0004310 Simmondsia chinensis
Sed0013495 Sechium edule
SEGI_05482 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18774 Striga asiatica
SHI17490 Sapria himalayana
Solyc12g038590.2 Solanum lycopersicum
Solyc12g038600.2 Solanum lycopersicum
Sopen12g018880 Solanum pennellii
Sp1g16570 Schrenkiella parvula
TAR371G0785 Trochodendron aralioides
THA.LOC104808039 Tarenaya hassleriana
Thecc.03G001900 Theobroma cacao
Thhalv10008142m.g Eutrema salsugineum
Thhalv10019561m.g Eutrema salsugineum
TPR.G1983 Trifolium pratense
TWI81G0201 Tripterygium wilfordii
unitig_699.g19027 Utricularia gibba
vmacro17622 Vaccinium macrocarpon
vmacro17623 Vaccinium macrocarpon
VMungo1215G2693 Vigna mungo
Zm00001eb370410 Zea mays

User provided reference genes

Program Settings