Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01440 Brassica napus
A03p05500 Brassica napus
A10p25530 Brassica napus
Aa31LG3G14960 Aethionema arabicum
Actinidia06985 Actinidia chinensis
Actinidia24474 Actinidia chinensis
Ah.06g194850 Amaranthus hybridus
AL6G23070 Arabidopsis lyrata
Aqoxy1G00419 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2WG6GK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4M7FUH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7BKA07 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJF5S0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U80ME1 Arachis hypogaea
AT5G12260 Arabidopsis thaliana
ATR0307G058 Amborella trichopoda
ATR0307G068 Amborella trichopoda
ATR0718G001 Amborella trichopoda
ATR0745G074 Amborella trichopoda
Atru.chr12.1308 Acer truncatum
Atru.chr3.2838 Acer truncatum
AUR62000224 Chenopodium quinoa
AUR62006570 Chenopodium quinoa
BcaB01g05413 Brassica carinata
BcaNung06216 Brassica carinata
BcaNung06730 Brassica carinata
BolC3t13147H Brassica oleracea
BolC3t13148H Brassica oleracea
BolC9t59294H Brassica oleracea
BraA02t05123Z Brassica rapa
BraA03t09888Z Brassica rapa
BraA10t44617Z Brassica rapa
C03p06420 Brassica napus
C09p64610 Brassica napus
CANSAT54G2831 Cannabis sativa
CARHR200840 Cardamine hirsuta
CARHR200850 Cardamine hirsuta
Carub.0006s1077 Capsella rubella
Carub.0006s1078 Capsella rubella
Ca_23430_v3 Cicer arietinum L.
CBR_g21026 Chara braunii
CBR_g22918 Chara braunii
Cc01_g06610 Coffea canephora
CDE08G1453 Ceratophyllum demersum
Cfa009918 Carpinus fangiana
Ciclev10014615m.g Citrus clementina
Ciclev10017537m.g Citrus clementina
CiPaw.13G147500 Carya illinoinensis
CiPaw.14G109800 Carya illinoinensis
ClCG02G022640 Citrullus lanatus
COL.COLO4_06626 Corchorus olitorius
Cpa.g.sc34.192 Carica papaya
CsaV3_6G038760 Cucumis sativus L.
CSS0023910 Camellia sinensis var. sinensis
CSS0032342 Camellia sinensis var. sinensis
DCAR_031616 Daucus carota
Dinv29317 Davidia involucrata
Duzib150G1150 Durio zibethinus
ECA240G2886 Erigeron canadensis
ECA240G3817 Erigeron canadensis
EL10Ac4g10081 Beta vulgaris
Eucgr.J00670 Eucalyptus grandis
FAN01G0016 Fragaria x ananassa
FAN01G2262 Fragaria x ananassa
FAN03G0457 Fragaria x ananassa
FAN06G2810 Fragaria x ananassa
FAN08G1833 Fragaria x ananassa
FAN10G0972 Fragaria x ananassa
FAN13G0138 Fragaria x ananassa
FAN18G3162 Fragaria x ananassa
FvH4_5g29830 Fragaria vesca
FvH4_7g06910 Fragaria vesca
Glyma.07G045400 Glycine max
Glyma.16G013300 Glycine max
Gohir.A05G072500 Gossypium hirsutum
Gohir.D05G075300 Gossypium hirsutum
Gorai.009G076700 Gossypium raimondii
GSVIVG01000077001 Vitis vinifera
HanXRQChr03g0091561 Helianthus annuus
Haze_23276 Corylus avellana
Hma1.2p1_0811F.1_g222140 Hydrangea macrophylla
HPP92_025126 Vanilla planifolia
Hund07413 Selenicereus undatus
Lalb_Chr17g0343281 Lupinus albus
Lj3g0015121 Lotus japonicus
Lj4A832T45 Lonicera japonica
Lj6A106G22 Lonicera japonica
Lj6A106T24 Lonicera japonica
Lj6C105G1 Lonicera japonica
Lsat_1_v5_gn_3_117120 Lactuca sativa
Manes.14G139200 Manihot esculenta
Mapoly0001s0235 Marchantia polymorpha
MBI13_g07374_MAGBIO Magnolia biondii
MCO17G065 Micromonas commoda
MD10G1340300 Malus domestica
MD13G1224500 Malus domestica
MD13G1224600 Malus domestica
Medtr2g041990 Medicago truncatula
Medtr8g023050 Medicago truncatula
MELO3C014538.2 Cucumis melo
Migut.N02384 Erythranthe guttata
Migut.N02385 Erythranthe guttata
MSTRG.12434 Avicennia marina
Nitab4.5_0000492g0170 Nicotiana tabacum
Nitab4.5_0002026g0120 Nicotiana tabacum
Nn5g28862 Nelumbo nucifera
Oeu025917.1 Olea europaea
Oeu061691.1 Olea europaea
Os01g0283000 Oryza sativa ssp. japonica
Peaxi162Scf00029g02411 Petunia axillaris
PGR102G2398 Punica granatum
PGSC0003DMG400032507 Solanum tuberosum
Phvul.010G072800 Phaseolus vulgaris
Potri.001G272400 Populus trichocarpa
Potri.009G066900 Populus trichocarpa
Potri.012G121826 Populus trichocarpa
Pp3c3_19100 Physcomitrium patens
Prupe.1G051200 Prunus persica
Psat4g165720 Pisum sativum
PSO566G0107 Papaver somniferum
PSO782G1935 Papaver somniferum
QL01p016300 Quercus lobata
RcHm_v2.0_Chr1g0336841 Rosa chinensis
RcHm_v2.0_Chr7g0223431 Rosa chinensis
Rhsim13G0204200 Rhododendron simsii
Rhsim13G0204400 Rhododendron simsii
Sabra09G0049800 Salix brachista
Sabra16G0167700 Salix brachista
SalBow6G0163 Salvia bowleyana
Sc09g0001150 Simmondsia chinensis
Sed0008510 Sechium edule
SEGI_13581 Sequoiadendron giganteum
SGA_v2.0_scaffold26G11394 Striga asiatica
SGA_v2.0_scaffold3G01435 Striga asiatica
SHI24959 Sapria himalayana
SMO358G0189 Selaginella moellendorffii
Solyc11g062360.2 Solanum lycopersicum
Sopen11g024360 Solanum pennellii
Sp6g31370 Schrenkiella parvula
Sp6g31380 Schrenkiella parvula
TAR623G1747 Trochodendron aralioides
THA.LOC104811206 Tarenaya hassleriana
Thecc.09G253700 Theobroma cacao
Thhalv10012969m.g Eutrema salsugineum
Thhalv10028084m.g Eutrema salsugineum
TPR.G18167 Trifolium pratense
TWI31G0720 Tripterygium wilfordii
TWI79G0625 Tripterygium wilfordii
unitig_699.g19150 Utricularia gibba
VMungo0540G0727 Vigna mungo
Zm00001eb129370 Zea mays

User provided reference genes

Program Settings