Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31430 Brassica napus
A06p44970 Brassica napus
A09p23110 Brassica napus
Aa31LG9G5480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis
Actinidia34018 Actinidia chinensis
Actinidia39792 Actinidia chinensis
AL8G10410 Arabidopsis lyrata
Aqoxy4G02191 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea
AT5G47560 Arabidopsis thaliana
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum
AUR62012806 Chenopodium quinoa
AUR62021848 Chenopodium quinoa
BcaB05g22957 Brassica carinata
BcaC03g16972 Brassica carinata
BcaC04g21615 Brassica carinata
BcaC06g31368 Brassica carinata
BcaC06g31369 Brassica carinata
BcaC06g31373 Brassica carinata
BcaC06g34240 Brassica carinata
BolC2t10970H Brassica oleracea
BolC7t43662H Brassica oleracea
BolC9t55848H Brassica oleracea
BraA02t08145Z Brassica rapa
BraA06t27368Z Brassica rapa
BraA09t37914Z Brassica rapa
C02p48760 Brassica napus
C07p31210 Brassica napus
C09p29850 Brassica napus
CAN.G1186.45 Capsicum annuum
CANSAT56G0760 Cannabis sativa
CARHR173790 Cardamine hirsuta
Carub.0008s0022 Capsella rubella
Ca_00729_v3 Cicer arietinum L.
Ca_21041_v3 Cicer arietinum L.
Cc09_g00800 Coffea canephora
Cfa000089 Carpinus fangiana
Cfa000090 Carpinus fangiana
Cfa025410 Carpinus fangiana
Ciclev10014770m.g Citrus clementina
CiPaw.02G047500 Carya illinoinensis
CiPaw.09G103400 Carya illinoinensis
ClCG01G010280 Citrullus lanatus
COL.COLO4_31899 Corchorus olitorius
Cre06.g251650 Chlamydomonas reinhardtii
CsaV3_1G017190 Cucumis sativus L.
CSS0031856 Camellia sinensis var. sinensis
CSS0039577 Camellia sinensis var. sinensis
CSS0045138 Camellia sinensis var. sinensis
DCAR_030865 Daucus carota
Dinv07411 Davidia involucrata
Duzib160G0749 Durio zibethinus
ECA240G2526 Erigeron canadensis
EL10Ac8g20211 Beta vulgaris
Eucgr.E03924 Eucalyptus grandis
Eucgr.L01902 Eucalyptus grandis
FAN21G0575 Fragaria x ananassa
FAN21G2703 Fragaria x ananassa
FAN22G1464 Fragaria x ananassa
FAN25G1838 Fragaria x ananassa
FvH4_3g00890 Fragaria vesca
FvH4_3g00891 Fragaria vesca
Glyma.07G265900 Glycine max
Glyma.09G010700 Glycine max
Glyma.09G010800 Glycine max
Glyma.15G115200 Glycine max
Gohir.A06G153700 Gossypium hirsutum
Gohir.A10G008900 Gossypium hirsutum
Gohir.D06G160500 Gossypium hirsutum
Gohir.D10G008600 Gossypium hirsutum
Gorai.010G187200 Gossypium raimondii
Gorai.011G009400 Gossypium raimondii
GSVIVG01003326001 Vitis vinifera
GSVIVG01006080001 Vitis vinifera
HanXRQChr05g0129101 Helianthus annuus
Haze_06951 Corylus avellana
HPP92_022800 Vanilla planifolia
Hund23404 Selenicereus undatus
Lalb_Chr18g0057021 Lupinus albus
Lj1A1241T64 Lonicera japonica
Lj4g0027564 Lotus japonicus
Lj6g0016962 Lotus japonicus
Lsat_1_v5_gn_7_13740 Lactuca sativa
Manes.08G069675 Manihot esculenta
Mapoly0082s0008 Marchantia polymorpha
MBI19_g06154_MAGBIO Magnolia biondii
MD05G1358600 Malus domestica
MD10G1332700 Malus domestica
MD10G1332900 Malus domestica
MD10G1333000 Malus domestica
MD10G1333600 Malus domestica
Medtr2g026030 Medicago truncatula
Medtr4g133230 Medicago truncatula
MELO3C025563.2 Cucumis melo
Migut.M01405 Erythranthe guttata
Nitab4.5_0000143g0160 Nicotiana tabacum
Nitab4.5_0003626g0040 Nicotiana tabacum
Nn1g03284 Nelumbo nucifera
Oeu026504.1 Olea europaea
Oeu052872.1 Olea europaea
Os08g0503700 Oryza sativa ssp. japonica
Os09g0484900 Oryza sativa ssp. japonica
Peaxi162Scf00352g00047 Petunia axillaris
PGR042G1052 Punica granatum
PGSC0003DMG400013282 Solanum tuberosum
Phvul.006G142700 Phaseolus vulgaris
Potri.006G013900 Populus trichocarpa
Pp3c15_15560 Physcomitrium patens
Prupe.4G009400 Prunus persica
Prupe.4G009500 Prunus persica
Psat1g175640 Pisum sativum
Psat4g004680 Pisum sativum
PSO541G1832 Papaver somniferum
PSO675G0622 Papaver somniferum
QL05p069311 Quercus lobata
RcHm_v2.0_Chr5g0001361 Rosa chinensis
RcHm_v2.0_Chr5g0001371 Rosa chinensis
Rhsim13G0144800 Rhododendron simsii
Sabra06G0009800 Salix brachista
SalBow8G1501 Salvia bowleyana
Sc05g0009650 Simmondsia chinensis
Sed0020280 Sechium edule
SEGI_04913 Sequoiadendron giganteum
SEGI_30483 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03752 Striga asiatica
SMO118G0209 Selaginella moellendorffii
SMO270G0136 Selaginella moellendorffii
Solyc11g012360.2 Solanum lycopersicum
Sopen11g007110 Solanum pennellii
Sp2g12290 Schrenkiella parvula
THA.LOC104806731 Tarenaya hassleriana
Thecc.06G234600 Theobroma cacao
Thhalv10000848m.g Eutrema salsugineum
TPR.G14633 Trifolium pratense
TPR.G16605 Trifolium pratense
TPR.G30452 Trifolium pratense
TPR.G30453 Trifolium pratense
TPR.G39985 Trifolium pratense
TPR.G5945 Trifolium pratense
TWI38G1092 Tripterygium wilfordii
unitig_748.g7600 Utricularia gibba
vmacro03635 Vaccinium macrocarpon
vmacro03636 Vaccinium macrocarpon
VMungo0540G0197 Vigna mungo
VMungo0540G1349 Vigna mungo
Zm00001eb158920 Zea mays
Zm00001eb316570 Zea mays

User provided reference genes

Program Settings