Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p13700 Brassica napus
A05p15620 Brassica napus
Aa31LG9G960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis
Actinidia16947 Actinidia chinensis
Actinidia18427 Actinidia chinensis
Actinidia35788 Actinidia chinensis
Ah.07g205180 Amaranthus hybridus
Ah.12g059440 Amaranthus hybridus
AL7G49080 Arabidopsis lyrata
Aqoxy1G02023 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea
AT5G40660 Arabidopsis thaliana
ATR0099G063 Amborella trichopoda
Atru.chr1.2050 Acer truncatum
Atru.chr1.36 Acer truncatum
Atru.chr11.190 Acer truncatum
Atru.chr2.3725 Acer truncatum
Atru.chr3.2666 Acer truncatum
Atru.chr4.450 Acer truncatum
Atru.chr6.2473 Acer truncatum
AUR62030692 Chenopodium quinoa
AUR62030697 Chenopodium quinoa
AUR62036338 Chenopodium quinoa
BcaB01g05885 Brassica carinata
BcaB06g27542 Brassica carinata
BcaC01g04583 Brassica carinata
BcaC04g20647 Brassica carinata
BolC4t26350H Brassica oleracea
BolC7t42010H Brassica oleracea
BolC9t56987H Brassica oleracea
BraA04t17030Z Brassica rapa
BraA05t20477Z Brassica rapa
C04p47490 Brassica napus
C05p11390 Brassica napus
C09p41080 Brassica napus
CAN.G473.48 Capsicum annuum
CANSAT64G0177 Cannabis sativa
CARHR261290 Cardamine hirsuta
Carub.0007s3482 Capsella rubella
Ca_01399_v3 Cicer arietinum L.
Ca_03861_v3 Cicer arietinum L.
CBR_g4059 Chara braunii
Cc06_g20980 Coffea canephora
Cc07_g00300 Coffea canephora
CDE07G0249 Ceratophyllum demersum
CDE12G0511 Ceratophyllum demersum
Cfa007299 Carpinus fangiana
Ciclev10015882m.g Citrus clementina
CiPaw.03G049000 Carya illinoinensis
CiPaw.04G032200 Carya illinoinensis
ClCG05G013000 Citrullus lanatus
COL.COLO4_29242 Corchorus olitorius
Cpa.g.sc130.54 Carica papaya
Cre17.g726250 Chlamydomonas reinhardtii
CsaV3_3G027540 Cucumis sativus L.
CSS0017957 Camellia sinensis var. sinensis
CSS0036459 Camellia sinensis var. sinensis
DCAR_021752 Daucus carota
Dinv33394 Davidia involucrata
Duzib147G0160 Durio zibethinus
Duzib264G0232 Durio zibethinus
ECA246G3787 Erigeron canadensis
EL10Ac5g10496 Beta vulgaris
EL10Ac5g11826 Beta vulgaris
EL10Ac9g21007 Beta vulgaris
Eucgr.I01701 Eucalyptus grandis
FAN02G3298 Fragaria x ananassa
FAN05G4015 Fragaria x ananassa
FAN09G1675 Fragaria x ananassa
FAN14G0298 Fragaria x ananassa
FAN14G4168 Fragaria x ananassa
FvH4_6g52290 Fragaria vesca
FvH4_6g52310 Fragaria vesca
Glyma.16G066000 Glycine max
Glyma.19G080702 Glycine max
Gohir.A05G342400 Gossypium hirsutum
Gohir.D04G080440 Gossypium hirsutum
Gorai.012G091200 Gossypium raimondii
GSVIVG01003974001 Vitis vinifera
HanXRQChr17g0549471 Helianthus annuus
Haze_14796 Corylus avellana
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla
HPP92_020467 Vanilla planifolia
HPP92_026167 Vanilla planifolia
Hund14985 Selenicereus undatus
Lalb_Chr14g0362991 Lupinus albus
Lj1g0027814 Lotus japonicus
Lj7A604T65 Lonicera japonica
Lsat_1_v5_gn_0_30781 Lactuca sativa
Manes.15G155100 Manihot esculenta
Mapoly0004s0068 Marchantia polymorpha
MBI19_g02443_MAGBIO Magnolia biondii
MBI19_g04325_MAGBIO Magnolia biondii
MCO13G572 Micromonas commoda
MD09G1019000 Malus domestica
MD17G1019500 Malus domestica
MD17G1019600 Malus domestica
Medtr0018s0290 Medicago truncatula
MELO3C014823.2 Cucumis melo
Migut.H00045 Erythranthe guttata
MSTRG.3120 Avicennia marina
Nitab4.5_0001031g0180 Nicotiana tabacum
Nitab4.5_0002158g0160 Nicotiana tabacum
Nn5g27187 Nelumbo nucifera
Oeu064389.1 Olea europaea
Os07g0644000 Oryza sativa ssp. japonica
Peaxi162Scf00420g00251 Petunia axillaris
PGR142G1575 Punica granatum
PGSC0003DMG400012644 Solanum tuberosum
Phvul.008G145713 Phaseolus vulgaris
Potri.001G338200 Populus trichocarpa
Pp3c2_19250 Physcomitrium patens
PRCOL_00001693 Prasinoderma coloniale
Prupe.3G298100 Prunus persica
Psat3g168560 Pisum sativum
PSO541G0959 Papaver somniferum
PSO675G8471 Papaver somniferum
QL02p073334 Quercus lobata
RcHm_v2.0_Chr2g0173821 Rosa chinensis
RcHm_v2.0_Chr2g0174241 Rosa chinensis
Rhsim08G0046600 Rhododendron simsii
Sabra16G0218900 Salix brachista
Sc03g0007130 Simmondsia chinensis
Sed0012039 Sechium edule
Sed0025595 Sechium edule
SEGI_10618 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34930 Striga asiatica
SGA_v2.0_scaffold18G08247 Striga asiatica
SHI03827 Sapria himalayana
SMO200G0187 Selaginella moellendorffii
Solyc02g093690.3 Solanum lycopersicum
Sopen02g038330 Solanum pennellii
Sp7g01200 Schrenkiella parvula
TAR628G1566 Trochodendron aralioides
TAR629G1306 Trochodendron aralioides
THA.LOC104825307 Tarenaya hassleriana
Thecc.04G026600 Theobroma cacao
Thhalv10027828m.g Eutrema salsugineum
TPR.G1112 Trifolium pratense
TWI56G0223 Tripterygium wilfordii
unitig_0.g536 Utricularia gibba
vmacro18309 Vaccinium macrocarpon
VMungo1080G0372 Vigna mungo
Zm00001eb329190 Zea mays

User provided reference genes

Program Settings