Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01760 Brassica napus
A09p12110 Brassica napus
Aa31LG8G15990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3065 Anthoceros agrestis
Actinidia07346 Actinidia chinensis
Actinidia31528 Actinidia chinensis
Ah.09g231700 Amaranthus hybridus
AL3G53020 Arabidopsis lyrata
AL7G19230 Arabidopsis lyrata
Aqoxy3G03036 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09RZEI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BHNU0I Arachis hypogaea
AT2G18900 Arabidopsis thaliana
AT3G26480 Arabidopsis thaliana
ATR1098G135 Amborella trichopoda
Atru.chr13.1778 Acer truncatum
Atru.chr7.881 Acer truncatum
AUR62033061 Chenopodium quinoa
AUR62042215 Chenopodium quinoa
BcaB03g16682 Brassica carinata
BcaB07g31639 Brassica carinata
BcaC04g22880 Brassica carinata
BcaC06g36488 Brassica carinata
BcaC06g36526 Brassica carinata
BcaC09g52044 Brassica carinata
BolC1t00640H Brassica oleracea
BolC7t40730H Brassica oleracea
BolC7t40765H Brassica oleracea
BolC9t54332H Brassica oleracea
BolC9t54333H Brassica oleracea
BraA07t27976Z Brassica rapa
BraA09t36855Z Brassica rapa
C01p06460 Brassica napus
C07p03290 Brassica napus
C07p03690 Brassica napus
C09p14300 Brassica napus
CANSAT11G1129 Cannabis sativa
CANSAT11G1181 Cannabis sativa
CARHR109460 Cardamine hirsuta
CARHR240490 Cardamine hirsuta
CARHR240500 Cardamine hirsuta
Carub.0003s3314 Capsella rubella
Carub.0007s0802 Capsella rubella
Ca_21236_v3 Cicer arietinum L.
CBR_g49376 Chara braunii
Cc05_g16000 Coffea canephora
CDE08G1653 Ceratophyllum demersum
Cfa010313 Carpinus fangiana
Cfa013310 Carpinus fangiana
Cfa026329 Carpinus fangiana
Ciclev10007405m.g Citrus clementina
CiPaw.08G035400 Carya illinoinensis
ClCG06G013450 Citrullus lanatus
COL.COLO4_37741 Corchorus olitorius
Cpa.g.sc523.1 Carica papaya
Cpa.g.sc95.47 Carica papaya
Cre04.g215350 Chlamydomonas reinhardtii
CsaV3_1G031710 Cucumis sativus L.
CSS0008978 Camellia sinensis var. sinensis
CSS0040034 Camellia sinensis var. sinensis
DCAR_013745 Daucus carota
Dinv42517 Davidia involucrata
Dinv42518 Davidia involucrata
Duzib150G0781 Durio zibethinus
ECA240G4652 Erigeron canadensis
EL10Ac6g14737 Beta vulgaris
EL10Ac6g14738 Beta vulgaris
Eucgr.C02353 Eucalyptus grandis
FAN07G0898 Fragaria x ananassa
FAN12G2097 Fragaria x ananassa
FAN17G0276 Fragaria x ananassa
FAN22G1078 Fragaria x ananassa
FvH4_4g07920 Fragaria vesca
Glyma.11G074200 Glycine max
Glyma.13G097400 Glycine max
Glyma.17G062200 Glycine max
Gohir.A05G004264 Gossypium hirsutum
Gohir.D05G004900 Gossypium hirsutum
Gorai.009G004800 Gossypium raimondii
GSVIVG01030738001 Vitis vinifera
HanXRQChr09g0273501 Helianthus annuus
Haze_03433 Corylus avellana
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla
HPP92_012201 Vanilla planifolia
Hund06466 Selenicereus undatus
Lalb_Chr07g0180551 Lupinus albus
Lj4g0004814 Lotus japonicus
Lj8C187G7 Lonicera japonica
Lsat_1_v5_gn_4_117360 Lactuca sativa
Lsat_1_v5_gn_5_51440 Lactuca sativa
Lsat_1_v5_gn_7_72221 Lactuca sativa
Lsat_1_v5_gn_7_93920 Lactuca sativa
Manes.06G023100 Manihot esculenta
Mapoly0156s0021 Marchantia polymorpha
MBI02_g12652_MAGBIO Magnolia biondii
MBI02_g33733_MAGBIO Magnolia biondii
MBI12_g20565_MAGBIO Magnolia biondii
MCO01G002 Micromonas commoda
MD13G1251600 Malus domestica
MD16G1255900 Malus domestica
MD16G1256100 Malus domestica
Medtr4g127820 Medicago truncatula
MELO3C017452.2 Cucumis melo
Migut.M01562 Erythranthe guttata
MSTRG.16114 Avicennia marina
Nitab4.5_0001749g0080 Nicotiana tabacum
Nitab4.5_0008437g0020 Nicotiana tabacum
Nn7g38118 Nelumbo nucifera
Oeu016137.1 Olea europaea
Os12g0609800 Oryza sativa ssp. japonica
Peaxi162Scf00452g00844 Petunia axillaris
PGR044G2140 Punica granatum
Phvul.003G144100 Phaseolus vulgaris
Potri.006G166500 Populus trichocarpa
Potri.018G091100 Populus trichocarpa
Pp3c7_4120 Physcomitrium patens
PRCOL_00005731 Prasinoderma coloniale
Prupe.1G084200 Prunus persica
Psat4g012800 Pisum sativum
PSO063G4841 Papaver somniferum
PSO782G3725 Papaver somniferum
QL02p098221 Quercus lobata
RcHm_v2.0_Chr4g0401591 Rosa chinensis
RcHm_v2.0_Chr4g0401681 Rosa chinensis
RcHm_v2.0_Chr4g0401691 Rosa chinensis
Rhsim13G0225800 Rhododendron simsii
Sabra06G0128100 Salix brachista
SalBow8G3700 Salvia bowleyana
Sc12g0007760 Simmondsia chinensis
Sed0012025 Sechium edule
Sed0012855 Sechium edule
SEGI_38878 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40224 Striga asiatica
SHI02896 Sapria himalayana
SMO356G0292 Selaginella moellendorffii
Solyc07g066410.4 Solanum lycopersicum
Sopen07g034580 Solanum pennellii
Sp3g32370 Schrenkiella parvula
TAR627G1078 Trochodendron aralioides
THA.LOC104803489 Tarenaya hassleriana
Thecc.09G175700 Theobroma cacao
Thhalv10022562m.g Eutrema salsugineum
Thhalv10024453m.g Eutrema salsugineum
TPR.G5437 Trifolium pratense
TWI34G0813 Tripterygium wilfordii
unitig_748.g7834 Utricularia gibba
vmacro21776 Vaccinium macrocarpon
VMungo1215G1808 Vigna mungo
Zm00001eb031520 Zea mays

User provided reference genes

Program Settings