Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p14480 Brassica napus
Aa31LG2G1700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5009 Anthoceros agrestis
Ah.07g197980 Amaranthus hybridus
Ah.12g053210 Amaranthus hybridus
AL1G56680 Arabidopsis lyrata
Aqoxy7G03851 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FPN7V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AA870A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9A8GQ Arachis hypogaea
AT1G64660 Arabidopsis thaliana
ATR0955G010 Amborella trichopoda
Atru.chr9.1882 Acer truncatum
AUR62007054 Chenopodium quinoa
AUR62019918 Chenopodium quinoa
BcaB07g31489 Brassica carinata
BcaC04g22597 Brassica carinata
BolC9t54645H Brassica oleracea
BraA09t37096Z Brassica rapa
C09p17470 Brassica napus
CAN.G567.88 Capsicum annuum
CAN.G792.25 Capsicum annuum
CANSAT21G1008 Cannabis sativa
CARHR046230 Cardamine hirsuta
Carub.0002s0007 Capsella rubella
Ca_09950_v3 Cicer arietinum L.
Ca_16297_v3 Cicer arietinum L.
Cc08_g16750 Coffea canephora
CDE04G3418 Ceratophyllum demersum
Cfa011922 Carpinus fangiana
Ciclev10020136m.g Citrus clementina
CiPaw.11G112200 Carya illinoinensis
CiPaw.12G077300 Carya illinoinensis
ClCG00G001140 Citrullus lanatus
ClCG01G001510 Citrullus lanatus
COL.COLO4_10796 Corchorus olitorius
Cpa.g.sc948.1 Carica papaya
Cre10.g426152 Chlamydomonas reinhardtii
CsaV3_3G000880 Cucumis sativus L.
CsaV3_5G001660 Cucumis sativus L.
CSS0012078 Camellia sinensis var. sinensis
CSS0044312 Camellia sinensis var. sinensis
DCAR_006545 Daucus carota
Dinv12930 Davidia involucrata
Duzib068G1057 Durio zibethinus
Duzib084G0098 Durio zibethinus
Duzib084G0235 Durio zibethinus
Duzib084G0863 Durio zibethinus
Duzib205G1585 Durio zibethinus
ECA246G1551 Erigeron canadensis
EL10Ac5g12428 Beta vulgaris
Eucgr.D01681 Eucalyptus grandis
FAN04G1760 Fragaria x ananassa
FAN08G1665 Fragaria x ananassa
FAN18G2505 Fragaria x ananassa
FvH4_5g10890 Fragaria vesca
Glyma.02G087900 Glycine max
Glyma.10G172700 Glycine max
Glyma.13G001200 Glycine max
Gohir.A09G188366 Gossypium hirsutum
Gohir.A09G188500 Gossypium hirsutum
Gohir.A09G188550 Gossypium hirsutum
Gohir.A12G240000 Gossypium hirsutum
Gohir.D09G183400 Gossypium hirsutum
Gohir.D12G241300 Gossypium hirsutum
Gorai.006G205700 Gossypium raimondii
Gorai.006G205800 Gossypium raimondii
Gorai.008G258500 Gossypium raimondii
HanXRQChr06g0166781 Helianthus annuus
HanXRQChr17g0534241 Helianthus annuus
Hma1.2p1_0303F.1_g118880 Hydrangea macrophylla
Hma1.2p1_0436F.1_g152760 Hydrangea macrophylla
Hma1.2p1_3123F.1_g332873 Hydrangea macrophylla
Hma1.2p1_3123F.1_g332876 Hydrangea macrophylla
HPP92_003298 Vanilla planifolia
HPP92_014941 Vanilla planifolia
HPP92_014987 Vanilla planifolia
Hund11347 Selenicereus undatus
Hund20460 Selenicereus undatus
Lalb_Chr02g0149571 Lupinus albus
Lalb_Chr14g0362651 Lupinus albus
Lalb_Chr24g0402781 Lupinus albus
Lj5g0005738 Lotus japonicus
Lsat_1_v5_gn_3_14320 Lactuca sativa
Lsat_1_v5_gn_3_14340 Lactuca sativa
Lsat_1_v5_gn_3_14400 Lactuca sativa
Manes.01G056204 Manihot esculenta
Manes.02G002900 Manihot esculenta
MD06G1118700 Malus domestica
MD10G1269200 Malus domestica
MD11G1108600 Malus domestica
MD14G1126800 Malus domestica
Medtr1g077890 Medicago truncatula
Medtr3g080850 Medicago truncatula
MELO3C005786.2 Cucumis melo
MELO3C013774.2 Cucumis melo
Migut.E00627 Erythranthe guttata
Migut.E00629 Erythranthe guttata
MSTRG.13714 Avicennia marina
Nitab4.5_0007001g0050 Nicotiana tabacum
Nn3g18808 Nelumbo nucifera
Oeu013384.1 Olea europaea
Oeu031496.1 Olea europaea
Oeu041373.1 Olea europaea
Os10g0517500 Oryza sativa ssp. japonica
PGR031G0198 Punica granatum
PGR031G2034 Punica granatum
PGR031G3120 Punica granatum
PGSC0003DMG400005863 Solanum tuberosum
PGSC0003DMG400012239 Solanum tuberosum
Phvul.006G012501 Phaseolus vulgaris
Phvul.L005001 Phaseolus vulgaris
Potri.001G084000 Populus trichocarpa
Potri.003G146600 Populus trichocarpa
Potri.003G187032 Populus trichocarpa
Pp3c13_23730 Physcomitrium patens
Pp3c3_14200 Physcomitrium patens
Pp3c7_23100 Physcomitrium patens
Prupe.5G129800 Prunus persica
Psat5g108800 Pisum sativum
Psat5g110080 Pisum sativum
Psat6g052400 Pisum sativum
PSO566G0075 Papaver somniferum
PSO782G2573 Papaver somniferum
PSO782G5046 Papaver somniferum
QL02p028086 Quercus lobata
RcHm_v2.0_Chr7g0186971 Rosa chinensis
Rhsim02G0252200 Rhododendron simsii
Sabra01G0060900 Salix brachista
Sabra03G0137000 Salix brachista
Sc01g0010700 Simmondsia chinensis
Sed0003804 Sechium edule
SEGI_17386 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30263 Striga asiatica
SGA_v2.0_scaffold57G20248 Striga asiatica
SMO364G0385 Selaginella moellendorffii
Solyc08g008580.3 Solanum lycopersicum
Solyc08g083110.4 Solanum lycopersicum
Sopen08g004400 Solanum pennellii
Sopen08g031330 Solanum pennellii
Sp2g00050 Schrenkiella parvula
TAR374G0899 Trochodendron aralioides
TAR374G1712 Trochodendron aralioides
TAR375G0147 Trochodendron aralioides
THA.LOC104817406 Tarenaya hassleriana
Thecc.03G221100 Theobroma cacao
TPR.G21324 Trifolium pratense
TPR.G22093 Trifolium pratense
TPR.G34814 Trifolium pratense
TWI15G0468 Tripterygium wilfordii
Zm00001eb220180 Zea mays

User provided reference genes

Program Settings