Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15250 Brassica napus
A10p10800 Brassica napus
Aa31LG3G9250 Aethionema arabicum
Actinidia03156 Actinidia chinensis
Actinidia08623 Actinidia chinensis
Actinidia34190 Actinidia chinensis
Actinidia34193 Actinidia chinensis
Ah.07g206050 Amaranthus hybridus
Ah.13g069830 Amaranthus hybridus
AL8G27930 Arabidopsis lyrata
AL8G27980 Arabidopsis lyrata
Aqoxy5G04112 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea
AT5G53280 Arabidopsis thaliana
ATR1093G054 Amborella trichopoda
Atru.chr1.279 Acer truncatum
AUR62021048 Chenopodium quinoa
AUR62031485 Chenopodium quinoa
BcaB01g04239 Brassica carinata
BcaB08g35688 Brassica carinata
BcaC01g06235 Brassica carinata
BcaC04g20477 Brassica carinata
BolC3t14190H Brassica oleracea
BolC9t57178H Brassica oleracea
BraA03t10818Z Brassica rapa
BraA10t43162Z Brassica rapa
C03p17830 Brassica napus
C09p43070 Brassica napus
CAN.G108.22 Capsicum annuum
CANSAT21G1757 Cannabis sativa
CARHR266320 Cardamine hirsuta
Carub.0008s1346 Capsella rubella
CBR_g41289 Chara braunii
Cc02_g01930 Coffea canephora
CDE02G0860 Ceratophyllum demersum
CDE10G0607 Ceratophyllum demersum
CDE10G1089 Ceratophyllum demersum
Cfa016358 Carpinus fangiana
Ciclev10005604m.g Citrus clementina
CiPaw.05G258300 Carya illinoinensis
CiPaw.06G007100 Carya illinoinensis
ClCG05G008660 Citrullus lanatus
COL.COLO4_35665 Corchorus olitorius
Cpa.g.sc3.45 Carica papaya
CsaV3_3G021850 Cucumis sativus L.
CSS0025805 Camellia sinensis var. sinensis
CSS0046287 Camellia sinensis var. sinensis
DCAR_014529 Daucus carota
Dinv28341 Davidia involucrata
Dinv35303 Davidia involucrata
Duzib084G0775 Durio zibethinus
ECA238G3691 Erigeron canadensis
EL10Ac3g05352 Beta vulgaris
Eucgr.K00322 Eucalyptus grandis
FAN01G2480 Fragaria x ananassa
FAN03G3090 Fragaria x ananassa
FAN06G0473 Fragaria x ananassa
FAN06G4508 Fragaria x ananassa
FAN10G2020 Fragaria x ananassa
FAN10G2063 Fragaria x ananassa
FvH4_7g30940 Fragaria vesca
Glyma.13G040300 Glycine max
Glyma.14G123700 Glycine max
Gohir.A12G252100 Gossypium hirsutum
Gohir.D12G253400 Gossypium hirsutum
Gorai.008G271100 Gossypium raimondii
GSVIVG01028731001 Vitis vinifera
HanXRQChr14g0462811 Helianthus annuus
Haze_00106 Corylus avellana
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla
HPP92_024018 Vanilla planifolia
Hund04825 Selenicereus undatus
Hund11687 Selenicereus undatus
Hund11688 Selenicereus undatus
Lalb_Chr01g0014881 Lupinus albus
Lj1C1012T12 Lonicera japonica
Lj1g0012174 Lotus japonicus
Lj3A911G21 Lonicera japonica
Lsat_1_v5_gn_2_134260 Lactuca sativa
Manes.06G156500 Manihot esculenta
Manes.14G018900 Manihot esculenta
MBI06_g22405_MAGBIO Magnolia biondii
MBI06_g22406_MAGBIO Magnolia biondii
MD01G1214600 Malus domestica
MD07G1284300 Malus domestica
Medtr1g028580 Medicago truncatula
MELO3C006974.2 Cucumis melo
Migut.F01055 Erythranthe guttata
MSTRG.23354 Avicennia marina
MSTRG.62 Avicennia marina
MSTRG.8493 Avicennia marina
Nitab4.5_0000472g0010 Nicotiana tabacum
Nitab4.5_0000473g0100 Nicotiana tabacum
Nn7g37380 Nelumbo nucifera
Oeu024464.1 Olea europaea
Oeu036883.1 Olea europaea
Oeu036884.1 Olea europaea
Oeu037109.1 Olea europaea
Os01g0224200 Oryza sativa ssp. japonica
Os06g0506000 Oryza sativa ssp. japonica
Peaxi162Scf00904g00326 Petunia axillaris
PGR142G0227 Punica granatum
PGSC0003DMG400009098 Solanum tuberosum
Phvul.008G159100 Phaseolus vulgaris
Potri.012G032200 Populus trichocarpa
Potri.015G022900 Populus trichocarpa
Prupe.2G306500 Prunus persica
Psat6g039240 Pisum sativum
PSO063G3645 Papaver somniferum
PSO170G4664 Papaver somniferum
QL09p011070 Quercus lobata
RcHm_v2.0_Chr1g0380031 Rosa chinensis
Rhsim03G0198300 Rhododendron simsii
Sabra10G0105200 Salix brachista
Sabra12G0021600 Salix brachista
Sabra12G0063200 Salix brachista
Sabra15G0017200 Salix brachista
Sabra15G0071500 Salix brachista
SalBow2G0402 Salvia bowleyana
Sc19g0001110 Simmondsia chinensis
Sed0007260 Sechium edule
Sed0021890 Sechium edule
SEGI_09179 Sequoiadendron giganteum
SEGI_25677 Sequoiadendron giganteum
SEGI_34742 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05259 Striga asiatica
Solyc03g007440.4 Solanum lycopersicum
Solyc03g007500.4 Solanum lycopersicum
Sopen03g003400 Solanum pennellii
Sopen03g003460 Solanum pennellii
Sp6g15430 Schrenkiella parvula
TAR374G1584 Trochodendron aralioides
TAR375G0232 Trochodendron aralioides
TAR629G2914 Trochodendron aralioides
THA.LOC104825132 Tarenaya hassleriana
Thecc.01G303500 Theobroma cacao
Thecc.03G192100 Theobroma cacao
Thhalv10014380m.g Eutrema salsugineum
TPR.G33305 Trifolium pratense
TWI14G0964 Tripterygium wilfordii
TWI23G0467 Tripterygium wilfordii
unitig_736.g22889 Utricularia gibba
unitig_90.g27528 Utricularia gibba
vmacro06579 Vaccinium macrocarpon
vmacro23247 Vaccinium macrocarpon
VMungo0647G1360 Vigna mungo
Zm00001eb192840 Zea mays
Zm00001eb203870 Zea mays
Zm00001eb237900 Zea mays
Zm00001eb338960 Zea mays

User provided reference genes

Program Settings