Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p29350 Brassica napus
Aa31LG4G16530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3309 Anthoceros agrestis
Actinidia04935 Actinidia chinensis
Actinidia37670 Actinidia chinensis
Actinidia37671 Actinidia chinensis
Ah.09g233410 Amaranthus hybridus
AL8G39620 Arabidopsis lyrata
Aqoxy3G00822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78U3A7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9HIF7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G10CE8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GYQ60G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KJ948Q Arachis hypogaea
AT5G62640 Arabidopsis thaliana
ATR0712G167 Amborella trichopoda
Atru.chr9.2345 Acer truncatum
AUR62027699 Chenopodium quinoa
AUR62031228 Chenopodium quinoa
BcaB02g09666 Brassica carinata
BcaB02g09669 Brassica carinata
BcaB02g09670 Brassica carinata
BcaB04g19993 Brassica carinata
BcaC01g02501 Brassica carinata
BolC3t18668H Brassica oleracea
BraA06t25888Z Brassica rapa
C03p64130 Brassica napus
CAN.G628.53 Capsicum annuum
CANSAT80G0562 Cannabis sativa
CARHR156590 Cardamine hirsuta
CARHR276450 Cardamine hirsuta
Carub.0005s1400 Capsella rubella
Carub.0008s2340 Capsella rubella
Ca_21861_v3 Cicer arietinum L.
CBR_g4762 Chara braunii
Cc04_g15980 Coffea canephora
CDE01G0549 Ceratophyllum demersum
CDE12G0348 Ceratophyllum demersum
Ciclev10019625m.g Citrus clementina
CiPaw.11G036000 Carya illinoinensis
CiPaw.12G005400 Carya illinoinensis
CiPaw.12G005600 Carya illinoinensis
ClCG01G014310 Citrullus lanatus
COL.COLO4_33419 Corchorus olitorius
Cpa.g.sc17.179 Carica papaya
Cre07.g348700 Chlamydomonas reinhardtii
CsaV3_1G008010 Cucumis sativus L.
CSS0046467 Camellia sinensis var. sinensis
DCAR_016527 Daucus carota
Dinv19901 Davidia involucrata
Dinv38643 Davidia involucrata
Duzib068G1437 Durio zibethinus
Duzib084G1322 Durio zibethinus
Duzib205G1395 Durio zibethinus
EL10Ac8g20579 Beta vulgaris
Eucgr.B00394 Eucalyptus grandis
FAN13G0367 Fragaria x ananassa
FvH4_5g15820 Fragaria vesca
Glyma.05G031100 Glycine max
Glyma.17G095700 Glycine max
Gohir.A07G065700 Gossypium hirsutum
Gohir.A11G028540 Gossypium hirsutum
Gohir.D07G070200 Gossypium hirsutum
Gorai.001G074100 Gossypium raimondii
GSVIVG01008085001 Vitis vinifera
HanXRQChr09g0271391 Helianthus annuus
HanXRQChr12g0361591 Helianthus annuus
Haze_07757 Corylus avellana
Hma1.2p1_0104F.1_g050420 Hydrangea macrophylla
Hma1.2p1_0104F.1_g050430 Hydrangea macrophylla
Hma1.2p1_3047F.1_g332100 Hydrangea macrophylla
Hma1.2p1_3047F.1_g332110 Hydrangea macrophylla
HPP92_012530 Vanilla planifolia
HPP92_012535 Vanilla planifolia
Hund21165 Selenicereus undatus
Lalb_Chr07g0182371 Lupinus albus
Lalb_Chr13g0298111 Lupinus albus
Lj4g0007492 Lotus japonicus
Lj5A118T73 Lonicera japonica
Lsat_1_v5_gn_4_105560 Lactuca sativa
Manes.06G097700 Manihot esculenta
Manes.14G073400 Manihot esculenta
Mapoly0075s0020 Marchantia polymorpha
MBI04_g18038_MAGBIO Magnolia biondii
MCO02G371 Micromonas commoda
MD06G1185300 Malus domestica
MD14G1191200 Malus domestica
Medtr0444s0010 Medicago truncatula
Medtr4g107410 Medicago truncatula
Medtr4g107420 Medicago truncatula
MELO3C002218.2 Cucumis melo
Migut.I00111 Erythranthe guttata
MSTRG.23064 Avicennia marina
Nitab4.5_0000003g0080 Nicotiana tabacum
Nitab4.5_0000003g0090 Nicotiana tabacum
Nitab4.5_0000026g0250 Nicotiana tabacum
Nitab4.5_0003595g0020 Nicotiana tabacum
Nitab4.5_0003744g0020 Nicotiana tabacum
Nitab4.5_0003744g0040 Nicotiana tabacum
Nn3g17093 Nelumbo nucifera
Nn4g22998 Nelumbo nucifera
Oeu005056.1 Olea europaea
Oeu022609.1 Olea europaea
Oeu022615.1 Olea europaea
Os07g0192900 Oryza sativa ssp. japonica
Peaxi162Scf00496g00012 Petunia axillaris
PGR083G1434 Punica granatum
PGSC0003DMG400033066 Solanum tuberosum
Phvul.003G194500 Phaseolus vulgaris
Potri.012G093000 Populus trichocarpa
Potri.015G090200 Populus trichocarpa
Pp3c4_160 Physcomitrium patens
PRCOL_00003170 Prasinoderma coloniale
Prupe.5G184200 Prunus persica
Psat4g054400 Pisum sativum
PSO161G0045 Papaver somniferum
PSO478G3716 Papaver somniferum
QL03p038490 Quercus lobata
RcHm_v2.0_Chr7g0180311 Rosa chinensis
Rhsim12G0159900 Rhododendron simsii
Sabra12G0067700 Salix brachista
Sabra15G0112400 Salix brachista
SalBow5G2608 Salvia bowleyana
Sc12g0006090 Simmondsia chinensis
Sed0005054 Sechium edule
Sed0007285 Sechium edule
SEGI_10816 Sequoiadendron giganteum
SEGI_11308 Sequoiadendron giganteum
SEGI_15692 Sequoiadendron giganteum
SEGI_30438 Sequoiadendron giganteum
SGA_v2.0_scaffold56G20073 Striga asiatica
SMO351G0326 Selaginella moellendorffii
Solyc06g071140.3 Solanum lycopersicum
Sopen06g027440 Solanum pennellii
Sp2g25820 Schrenkiella parvula
TAR039G0004 Trochodendron aralioides
TAR622G0909 Trochodendron aralioides
TAR629G1437 Trochodendron aralioides
TAR640G0002 Trochodendron aralioides
THA.LOC104818246 Tarenaya hassleriana
Thecc.03G076300 Theobroma cacao
Thhalv10003972m.g Eutrema salsugineum
TPR.G38450 Trifolium pratense
TWI60G0433 Tripterygium wilfordii
TWI81G0893 Tripterygium wilfordii
unitig_0.g784 Utricularia gibba
unitig_0.g785 Utricularia gibba
vmacro16573 Vaccinium macrocarpon
VMungo1215G2590 Vigna mungo
Zm00001eb116440 Zea mays
Zm00001eb302650 Zea mays

User provided reference genes

Program Settings