Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35440 Brassica napus
A03p11380 Brassica napus
A10p17180 Brassica napus
Aa31LG1G12090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis
Actinidia07046 Actinidia chinensis
Actinidia37217 Actinidia chinensis
AL781U10010 Arabidopsis lyrata
AL8G36530 Arabidopsis lyrata
Aqoxy4G02983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea
AT5G59960 Arabidopsis thaliana
ATR0559G318 Amborella trichopoda
Atru.chr3.3838 Acer truncatum
AUR62001822 Chenopodium quinoa
AUR62009609 Chenopodium quinoa
BcaB08g36206 Brassica carinata
BcaC04g19652 Brassica carinata
BcaC08g43193 Brassica carinata
BolC3t13778H Brassica oleracea
BolC6t35622H Brassica oleracea
BolC9t58114H Brassica oleracea
BraA02t08545Z Brassica rapa
BraA03t10452Z Brassica rapa
BraA10t43799Z Brassica rapa
C03p13130 Brassica napus
C03p13170 Brassica napus
C06p04980 Brassica napus
C09p52470 Brassica napus
CAN.G661.4 Capsicum annuum
CANSAT54G1644 Cannabis sativa
CARHR273590 Cardamine hirsuta
CARHR273600 Cardamine hirsuta
Carub.0008s2049 Capsella rubella
Carub.0008s2068 Capsella rubella
Ca_19183_v3 Cicer arietinum L.
CBR_g46654 Chara braunii
Cc01_g12500 Coffea canephora
CDE07G1169 Ceratophyllum demersum
Cfa011464 Carpinus fangiana
Ciclev10028710m.g Citrus clementina
CiPaw.13G097700 Carya illinoinensis
ClCG03G001950 Citrullus lanatus
COL.COLO4_18471 Corchorus olitorius
Cpa.g.sc190.13 Carica papaya
Cre09.g412850 Chlamydomonas reinhardtii
CsaV3_1G033620 Cucumis sativus L.
CSS0023093 Camellia sinensis var. sinensis
CSS0048955 Camellia sinensis var. sinensis
DCAR_018895 Daucus carota
Dinv03548 Davidia involucrata
Dinv11067 Davidia involucrata
Dinv32870 Davidia involucrata
Duzib150G1309 Durio zibethinus
Duzib168G0637 Durio zibethinus
Duzib170G0837 Durio zibethinus
Duzib205G1865 Durio zibethinus
ECA247G3571 Erigeron canadensis
EL10Ac7g15978 Beta vulgaris
Eucgr.B02388 Eucalyptus grandis
FAN11G2539 Fragaria x ananassa
FAN21G1310 Fragaria x ananassa
FAN25G2556 Fragaria x ananassa
FvH4_3g35470 Fragaria vesca
Glyma.11G141400 Glycine max
Glyma.12G064800 Glycine max
Gohir.A03G039700 Gossypium hirsutum
Gohir.A08G000181 Gossypium hirsutum
Gohir.D03G128400 Gossypium hirsutum
Gohir.D08G010900 Gossypium hirsutum
Gorai.003G135100 Gossypium raimondii
Gorai.004G004400 Gossypium raimondii
GSVIVG01025008001 Vitis vinifera
HanXRQChr04g0107001 Helianthus annuus
HanXRQChr05g0134321 Helianthus annuus
HanXRQChr06g0175771 Helianthus annuus
HanXRQChr07g0192801 Helianthus annuus
Haze_24049 Corylus avellana
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla
HPP92_015526 Vanilla planifolia
Hund18927 Selenicereus undatus
Lalb_Chr01g0003761 Lupinus albus
Lj1A157T41 Lonicera japonica
Lj1A771T11 Lonicera japonica
Lj2C1057T15 Lonicera japonica
Lj2C1057T16 Lonicera japonica
Lj3g0008400 Lotus japonicus
Lsat_1_v5_gn_8_77921 Lactuca sativa
Lsat_1_v5_gn_9_22360 Lactuca sativa
Manes.04G032300 Manihot esculenta
Manes.11G133000 Manihot esculenta
Mapoly0001s0555 Marchantia polymorpha
MBI14_g18541_MAGBIO Magnolia biondii
MD03G1097100 Malus domestica
MD11G1143700 Malus domestica
Medtr4g063570 Medicago truncatula
MELO3C020709.2 Cucumis melo
Migut.D02114 Erythranthe guttata
Migut.G01105 Erythranthe guttata
Migut.G01142 Erythranthe guttata
Migut.N02667 Erythranthe guttata
MSTRG.17840 Avicennia marina
Nitab4.5_0000610g0050 Nicotiana tabacum
Nitab4.5_0000610g0150 Nicotiana tabacum
Nitab4.5_0003782g0060 Nicotiana tabacum
Nn2g10420 Nelumbo nucifera
Nn2g12934 Nelumbo nucifera
Oeu041027.1 Olea europaea
Os01g0151600 Oryza sativa ssp. japonica
Peaxi162Scf00406g00137 Petunia axillaris
PGR102G2111 Punica granatum
Phvul.011G065900 Phaseolus vulgaris
Potri.001G237000 Populus trichocarpa
Potri.009G028500 Populus trichocarpa
Pp3c24_20310 Physcomitrium patens
Pp3c8_24390 Physcomitrium patens
Prupe.6G081500 Prunus persica
Psat7g217880 Pisum sativum
Psat7g218000 Pisum sativum
Psat7g218040 Pisum sativum
PSO339G5095 Papaver somniferum
PSO384G0451 Papaver somniferum
PSO384G2944 Papaver somniferum
QL01p032955 Quercus lobata
RcHm_v2.0_Chr5g0063631 Rosa chinensis
Sabra09G0019700 Salix brachista
SalBow2G3032 Salvia bowleyana
SalBow3G3342 Salvia bowleyana
Sc21g0005570 Simmondsia chinensis
Sed0009981 Sechium edule
SGA_v2.0_scaffold61G21266 Striga asiatica
SMO118G0033 Selaginella moellendorffii
Solyc11g073300.2 Solanum lycopersicum
Sopen11g030920 Solanum pennellii
Sp6g21640 Schrenkiella parvula
TAR369G0226 Trochodendron aralioides
TAR623G0510 Trochodendron aralioides
THA.LOC104799466 Tarenaya hassleriana
THA.LOC104810819 Tarenaya hassleriana
Thecc.09G325700 Theobroma cacao
Thhalv10013947m.g Eutrema salsugineum
TPR.G10217 Trifolium pratense
TWI31G1179 Tripterygium wilfordii
TWI79G0894 Tripterygium wilfordii
unitig_899.g14894 Utricularia gibba
vmacro03096 Vaccinium macrocarpon
VMungo1127G0043 Vigna mungo
Zm00001eb124290 Zea mays

User provided reference genes

Program Settings