Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01810 Brassica napus
A05p04680 Brassica napus
A05p04700 Brassica napus
Aa31LG10G14300 Aethionema arabicum
Aa31LG1G26120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1568 Anthoceros agrestis
Actinidia05803 Actinidia chinensis
Actinidia30969 Actinidia chinensis
Ah.09g232340 Amaranthus hybridus
AL4G43550 Arabidopsis lyrata
Aqoxy3G02476 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FT2T1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U68WY7 Arachis hypogaea
AT2G44525 Arabidopsis thaliana
AT3G60150 Arabidopsis thaliana
ATR0049G020 Amborella trichopoda
Atru.chr5.18 Acer truncatum
AUR62034033 Chenopodium quinoa
AUR62038597 Chenopodium quinoa
BcaB02g08189 Brassica carinata
BcaB02g08829 Brassica carinata
BcaC02g10116 Brassica carinata
BcaC02g12300 Brassica carinata
BolC4t22182H Brassica oleracea
BolC4t24818H Brassica oleracea
BraA04t15905Z Brassica rapa
BraA05t19444Z Brassica rapa
BraA05t19447Z Brassica rapa
BraA05t19448Z Brassica rapa
C04p05420 Brassica napus
C04p32550 Brassica napus
CAN.G1480.6 Capsicum annuum
CAN.G74.36 Capsicum annuum
CANSAT21G0345 Cannabis sativa
CARHR139740 Cardamine hirsuta
CARHR170460 Cardamine hirsuta
Carub.0004s2709 Capsella rubella
Carub.0005s2688 Capsella rubella
Cc02_g25880 Coffea canephora
Cc04_g01570 Coffea canephora
CDE11G0764 Ceratophyllum demersum
Ciclev10022551m.g Citrus clementina
CiPaw.13G020500 Carya illinoinensis
CiPaw.14G014400 Carya illinoinensis
ClCG06G000740 Citrullus lanatus
COL.COLO4_20817 Corchorus olitorius
Cpa.g.c35192.2 Carica papaya
Cpa.g.sc587.3 Carica papaya
Cre12.g496800 Chlamydomonas reinhardtii
CsaV3_3G022410 Cucumis sativus L.
CsaV3_5G024660 Cucumis sativus L.
CsaV3_6G004620 Cucumis sativus L.
CsaV3_6G006530 Cucumis sativus L.
CsaV3_6G021750 Cucumis sativus L.
CsaV3_6G037000 Cucumis sativus L.
CsaV3_UNG176370 Cucumis sativus L.
CSS0044670 Camellia sinensis var. sinensis
DCAR_015764 Daucus carota
Dinv43568 Davidia involucrata
Dinv44001 Davidia involucrata
Duzib128G0726 Durio zibethinus
ECA246G0884 Erigeron canadensis
EL10Ac8g19580 Beta vulgaris
Eucgr.D01136 Eucalyptus grandis
FAN10G0867 Fragaria x ananassa
FAN19G1058 Fragaria x ananassa
FAN23G1419 Fragaria x ananassa
FAN26G2919 Fragaria x ananassa
FAN28G1372 Fragaria x ananassa
FvH4_1g27010 Fragaria vesca
Glyma.03G100700 Glycine max
Gohir.A05G333500 Gossypium hirsutum
Gohir.D04G073000 Gossypium hirsutum
Gorai.012G082000 Gossypium raimondii
GSVIVG01018384001 Vitis vinifera
HanXRQChr05g0162431 Helianthus annuus
Haze_02935 Corylus avellana
Hma1.2p1_0021F.1_g014430 Hydrangea macrophylla
HPP92_003510 Vanilla planifolia
HPP92_003514 Vanilla planifolia
Hund26556 Selenicereus undatus
Lalb_Chr07g0194931 Lupinus albus
Lj3g0025670 Lotus japonicus
Lj9C547T8 Lonicera japonica
Lsat_1_v5_gn_6_101400 Lactuca sativa
Manes.05G060800 Manihot esculenta
Mapoly0033s0133 Marchantia polymorpha
MBI04_g13864_MAGBIO Magnolia biondii
MCO06G183 Micromonas commoda
MD04G1140000 Malus domestica
MD07G1082600 Malus domestica
MD09G1285000 Malus domestica
Medtr8g009670 Medicago truncatula
MELO3C022467.2 Cucumis melo
Migut.N01703 Erythranthe guttata
MSTRG.28124 Avicennia marina
Nitab4.5_0001476g0110 Nicotiana tabacum
Nitab4.5_0004264g0010 Nicotiana tabacum
Nn1g07674 Nelumbo nucifera
Nn1g07676 Nelumbo nucifera
Nn1g07677 Nelumbo nucifera
Oeu002885.1 Olea europaea
Os03g0590700 Oryza sativa ssp. japonica
Os10g0571100 Oryza sativa ssp. japonica
Peaxi162Scf01124g00012 Petunia axillaris
PGR044G2350 Punica granatum
Phvul.001G073900 Phaseolus vulgaris
Phvul.010G040200 Phaseolus vulgaris
Potri.014G179500 Populus trichocarpa
Pp3c12_4990 Physcomitrium patens
PRCOL_00001209 Prasinoderma coloniale
Prupe.2G110500 Prunus persica
Prupe.3G009000 Prunus persica
Psat4g216480 Pisum sativum
PSO063G1771 Papaver somniferum
PSO782G3769 Papaver somniferum
QL04p024857 Quercus lobata
QL04p024921 Quercus lobata
RcHm_v2.0_Chr3g0487321 Rosa chinensis
Rhsim07G0040800 Rhododendron simsii
Rhsim07G0041300 Rhododendron simsii
RhsimUnG0113600 Rhododendron simsii
Sabra14G0137800 Salix brachista
Sabra14G0139700 Salix brachista
Sabra14G0139800 Salix brachista
SalBow4G2359 Salvia bowleyana
Sc23g0004110 Simmondsia chinensis
Sed0007303 Sechium edule
Sed0018381 Sechium edule
SEGI_24442 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28731 Striga asiatica
SHI13674 Sapria himalayana
SMO364G0857 Selaginella moellendorffii
Solyc01g088350.4 Solanum lycopersicum
Sopen01g035180 Solanum pennellii
Sp4g26620 Schrenkiella parvula
Sp5g03060 Schrenkiella parvula
TAR375G0952 Trochodendron aralioides
THA.LOC104817165 Tarenaya hassleriana
Thecc.10G000600 Theobroma cacao
Thhalv10001659m.g Eutrema salsugineum
Thhalv10006276m.g Eutrema salsugineum
TPR.G17348 Trifolium pratense
TWI14G0309 Tripterygium wilfordii
TWI59G0909 Tripterygium wilfordii
unitig_85.g27219 Utricularia gibba
vmacro13553 Vaccinium macrocarpon
vmacro21096 Vaccinium macrocarpon
VMungo0331G0020 Vigna mungo
Zm00001eb024270 Zea mays
Zm00001eb390620 Zea mays

User provided reference genes

Program Settings