Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11400 Brassica napus
A09p61460 Brassica napus
Aa31LG4G430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis
Actinidia18100 Actinidia chinensis
Actinidia36285 Actinidia chinensis
AL1G27470 Arabidopsis lyrata
Aqoxy1G02408 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea
AT1G15370 Arabidopsis thaliana
ATR1120G077 Amborella trichopoda
Atru.chr1.2995 Acer truncatum
AUR62012381 Chenopodium quinoa
AUR62012868 Chenopodium quinoa
AUR62031521 Chenopodium quinoa
BcaB03g14545 Brassica carinata
BcaC05g25475 Brassica carinata
BcaC05g25490 Brassica carinata
BcaC07g41506 Brassica carinata
BcaC07g41508 Brassica carinata
BolC5t30088H Brassica oleracea
BolC8t52049H Brassica oleracea
BraA06t24317Z Brassica rapa
BraA09t41517Z Brassica rapa
C05p13510 Brassica napus
C08p45030 Brassica napus
CAN.G185.10 Capsicum annuum
CAN.G321.60 Capsicum annuum
CAN.G407.94 Capsicum annuum
CARHR015900 Cardamine hirsuta
Carub.0001s1514 Capsella rubella
CBR_g8585 Chara braunii
Cc04_g04240 Coffea canephora
CDE04G3015 Ceratophyllum demersum
CDE06G1547 Ceratophyllum demersum
Cfa013154 Carpinus fangiana
Ciclev10026708m.g Citrus clementina
CiPaw.08G011500 Carya illinoinensis
ClCG05G016940 Citrullus lanatus
COL.COLO4_12946 Corchorus olitorius
Cre12.g561200 Chlamydomonas reinhardtii
CsaV3_3G046450 Cucumis sativus L.
CSS0003587 Camellia sinensis var. sinensis
CSS0011163 Camellia sinensis var. sinensis
DCAR_015322 Daucus carota
Dinv30589 Davidia involucrata
Duzib235G0621 Durio zibethinus
ECA240G3509 Erigeron canadensis
EL10Ac2g04219 Beta vulgaris
EL10Ac9g22900 Beta vulgaris
Eucgr.F02527 Eucalyptus grandis
FAN02G1988 Fragaria x ananassa
FAN05G0038 Fragaria x ananassa
FAN09G2574 Fragaria x ananassa
FAN14G1538 Fragaria x ananassa
FvH4_6g29940 Fragaria vesca
Glyma.07G031300 Glycine max
Glyma.08G211500 Glycine max
Glyma.15G008700 Glycine max
Gohir.A06G098210 Gossypium hirsutum
Gohir.A10G074700 Gossypium hirsutum
Gohir.A13G076901 Gossypium hirsutum
Gohir.D01G156500 Gossypium hirsutum
Gohir.D06G099800 Gossypium hirsutum
Gohir.D07G161600 Gossypium hirsutum
Gohir.D10G076700 Gossypium hirsutum
Gohir.D13G076450 Gossypium hirsutum
Gorai.001G184900 Gossypium raimondii
Gorai.002G194200 Gossypium raimondii
Gorai.010G114700 Gossypium raimondii
Gorai.011G082800 Gossypium raimondii
Gorai.013G087100 Gossypium raimondii
GSVIVG01017313001 Vitis vinifera
HanXRQChr02g0046821 Helianthus annuus
Haze_21525 Corylus avellana
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla
Hund04518 Selenicereus undatus
Lalb_Chr04g0262431 Lupinus albus
Lalb_Chr22g0350881 Lupinus albus
Lj3g0000080 Lotus japonicus
Lsat_1_v5_gn_1_2440 Lactuca sativa
Manes.04G114100 Manihot esculenta
Mapoly0005s0226 Marchantia polymorpha
MBI04_g07835_MAGBIO Magnolia biondii
MCO11G456 Micromonas commoda
MD17G1208900 Malus domestica
Medtr2g103690 Medicago truncatula
MELO3C003694.2 Cucumis melo
Migut.D01065 Erythranthe guttata
MSTRG.9432 Avicennia marina
Nitab4.5_0000620g0040 Nicotiana tabacum
Nitab4.5_0001450g0150 Nicotiana tabacum
Nitab4.5_0001764g0110 Nicotiana tabacum
Nitab4.5_0005235g0010 Nicotiana tabacum
Nitab4.5_0006187g0010 Nicotiana tabacum
Nitab4.5_0013106g0010 Nicotiana tabacum
Nn2g12037 Nelumbo nucifera
Nn8g39461 Nelumbo nucifera
Oeu024660.1 Olea europaea
Oeu045160.1 Olea europaea
Oeu052257.1 Olea europaea
Peaxi162Scf00145g01210 Petunia axillaris
Peaxi162Scf00207g00728 Petunia axillaris
Peaxi162Scf00332g00767 Petunia axillaris
PGR031G3479 Punica granatum
PGSC0003DMG400000635 Solanum tuberosum
PGSC0003DMG400028511 Solanum tuberosum
Phvul.010G154800 Phaseolus vulgaris
Potri.001G193100 Populus trichocarpa
Potri.006G253700 Populus trichocarpa
Pp3c18_11860 Physcomitrium patens
PRCOL_00001860 Prasinoderma coloniale
Prupe.3G084300 Prunus persica
Psat5g301920 Pisum sativum
PSO170G2441 Papaver somniferum
PSO455G0277 Papaver somniferum
QL02p021869 Quercus lobata
QL05p029040 Quercus lobata
QL05p029075 Quercus lobata
RcHm_v2.0_Chr2g0135941 Rosa chinensis
Rhsim10G0061400 Rhododendron simsii
Sabra01G0135700 Salix brachista
Sabra06G0198100 Salix brachista
SalBow3G1656 Salvia bowleyana
SalBow6G6988 Salvia bowleyana
Sc23g0006790 Simmondsia chinensis
Sed0022166 Sechium edule
Sed0027624 Sechium edule
SGA_v2.0_scaffold117G32369 Striga asiatica
SMO143G0054 Selaginella moellendorffii
Solyc03g116600.3 Solanum lycopersicum
Solyc06g068080.4 Solanum lycopersicum
Solyc11g008330.3 Solanum lycopersicum
Sopen03g035510 Solanum pennellii
Sopen06g025360 Solanum pennellii
Sopen11g004140 Solanum pennellii
Sp1g13700 Schrenkiella parvula
TAR636G0424 Trochodendron aralioides
THA.LOC104808231 Tarenaya hassleriana
THA.LOC104812503 Tarenaya hassleriana
Thecc.06G021400 Theobroma cacao
Thhalv10009024m.g Eutrema salsugineum
Thhalv10019295m.g Eutrema salsugineum
TPR.G29435 Trifolium pratense
TWI34G0752 Tripterygium wilfordii
TWI75G0638 Tripterygium wilfordii
unitig_747.g21296 Utricularia gibba
vmacro20098 Vaccinium macrocarpon
VMungo0331G0880 Vigna mungo
Zm00001eb064920 Zea mays

User provided reference genes

Program Settings