Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20310 Brassica napus
A08p12810 Brassica napus
Aa31LG2G13080 Aethionema arabicum
Actinidia00336 Actinidia chinensis
Actinidia02424 Actinidia chinensis
Ah.01g024370 Amaranthus hybridus
AL7G37720 Arabidopsis lyrata
Aqoxy5G00818 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.189H81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6ERH6H Arachis hypogaea
AT4G17000 Arabidopsis thaliana
ATR0739G125 Amborella trichopoda
Atru.chr5.2156 Acer truncatum
AUR62027054 Chenopodium quinoa
AUR62030897 Chenopodium quinoa
BcaB04g18391 Brassica carinata
BcaC07g38031 Brassica carinata
BcaC09g50433 Brassica carinata
BcaNung00136 Brassica carinata
BcaNung00137 Brassica carinata
BolC1t02498H Brassica oleracea
BolC8t48423H Brassica oleracea
BraA01t01961Z Brassica rapa
C01p25470 Brassica napus
CANSAT25G1117 Cannabis sativa
CARHR223560 Cardamine hirsuta
Carub.0007s2442 Capsella rubella
Ca_00196_v3 Cicer arietinum L.
Cc02_g20370 Coffea canephora
CDE01G0159 Ceratophyllum demersum
Cfa004757 Carpinus fangiana
Ciclev10030341m.g Citrus clementina
CiPaw.05G024800 Carya illinoinensis
ClCG02G007390 Citrullus lanatus
COL.COLO4_17832 Corchorus olitorius
Cpa.g.sc20.70 Carica papaya
CsaV3_7G007510 Cucumis sativus L.
CSS0001570 Camellia sinensis var. sinensis
CSS0002606 Camellia sinensis var. sinensis
CSS0009679 Camellia sinensis var. sinensis
CSS0014319 Camellia sinensis var. sinensis
CSS0027559 Camellia sinensis var. sinensis
CSS0049071 Camellia sinensis var. sinensis
DCAR_021925 Daucus carota
Dinv16049 Davidia involucrata
Duzib052G0961 Durio zibethinus
Duzib132G0818 Durio zibethinus
Duzib248G0647 Durio zibethinus
ECA234G1559 Erigeron canadensis
EL10Ac9g22153 Beta vulgaris
Eucgr.I02514 Eucalyptus grandis
FAN15G2336 Fragaria x ananassa
FAN20G2896 Fragaria x ananassa
FAN24G2723 Fragaria x ananassa
FAN27G0728 Fragaria x ananassa
FvH4_2g02560 Fragaria vesca
Glyma.13G253200 Glycine max
Glyma.15G061700 Glycine max
Gohir.A03G212800 Gossypium hirsutum
Gohir.D02G234300 Gossypium hirsutum
Gorai.005G262300 Gossypium raimondii
GSVIVG01036969001 Vitis vinifera
HanXRQChr05g0136851 Helianthus annuus
HanXRQChr10g0297671 Helianthus annuus
Haze_10351 Corylus avellana
Haze_10355 Corylus avellana
Hma1.2p1_2001F.1_g310650 Hydrangea macrophylla
HPP92_019572 Vanilla planifolia
HPP92_019573 Vanilla planifolia
Hund06491 Selenicereus undatus
Lalb_Chr18g0060201 Lupinus albus
Lj5C223T12 Lonicera japonica
Lj6g0001174 Lotus japonicus
Lj9A340T57 Lonicera japonica
Lsat_1_v5_gn_5_110520 Lactuca sativa
Manes.07G049500 Manihot esculenta
Manes.10G090200 Manihot esculenta
MBI16_g35720_MAGBIO Magnolia biondii
MD05G1112300 Malus domestica
MD10G1114900 Malus domestica
Medtr2g010490 Medicago truncatula
MELO3C018551.2 Cucumis melo
Migut.B00500 Erythranthe guttata
MSTRG.16657 Avicennia marina
Nitab4.5_0001477g0110 Nicotiana tabacum
Nitab4.5_0005609g0020 Nicotiana tabacum
Nn5g30227 Nelumbo nucifera
Nn6g34538 Nelumbo nucifera
Nn8g41058 Nelumbo nucifera
Oeu008559.3 Olea europaea
Oeu025237.1 Olea europaea
Os03g0770900 Oryza sativa ssp. japonica
Peaxi162Scf00016g03342 Petunia axillaris
PGR142G0772 Punica granatum
PGSC0003DMG400005123 Solanum tuberosum
Phvul.006G198000 Phaseolus vulgaris
Potri.001G287800 Populus trichocarpa
Potri.009G081900 Populus trichocarpa
Prupe.8G156900 Prunus persica
Prupe.8G157000 Prunus persica
Psat1g212160 Pisum sativum
PSO017G3844 Papaver somniferum
PSO170G1497 Papaver somniferum
QL11p027705 Quercus lobata
RcHm_v2.0_Chr6g0246371 Rosa chinensis
RcHm_v2.0_Chr6g0246451 Rosa chinensis
RcHm_v2.0_Chr6g0246631 Rosa chinensis
RcHm_v2.0_Chr6g0246641 Rosa chinensis
Rhsim11G0146400 Rhododendron simsii
Rhsim11G0146600 Rhododendron simsii
Sabra09G0063500 Salix brachista
Sabra16G0180100 Salix brachista
SalBow6G6879 Salvia bowleyana
Sc08g0004240 Simmondsia chinensis
Sed0010536 Sechium edule
SEGI_06913 Sequoiadendron giganteum
SEGI_28562 Sequoiadendron giganteum
SHI04902 Sapria himalayana
SHI04903 Sapria himalayana
Solyc01g106540.4 Solanum lycopersicum
Sopen01g048900 Solanum pennellii
Sp7g17190 Schrenkiella parvula
TAR376G0385 Trochodendron aralioides
TAR381G0477 Trochodendron aralioides
TAR381G1068 Trochodendron aralioides
TAR628G0407 Trochodendron aralioides
THA.LOC104807193 Tarenaya hassleriana
THA.LOC104819516 Tarenaya hassleriana
Thecc.02G034500 Theobroma cacao
Thhalv10024666m.g Eutrema salsugineum
TPR.G32640 Trifolium pratense
TWI59G1177 Tripterygium wilfordii
unitig_21.g20709 Utricularia gibba
vmacro01916 Vaccinium macrocarpon
vmacro01917 Vaccinium macrocarpon
VMungo0540G0411 Vigna mungo
VMungo0540G0872 Vigna mungo
VMungo0647G2224 Vigna mungo
Zm00001eb053000 Zea mays
Zm00001eb058870 Zea mays
Zm00001eb090710 Zea mays
Zm00001eb117330 Zea mays
Zm00001eb128270 Zea mays
Zm00001eb145000 Zea mays
Zm00001eb205120 Zea mays
Zm00001eb213820 Zea mays
Zm00001eb224580 Zea mays
Zm00001eb224590 Zea mays
Zm00001eb251570 Zea mays
Zm00001eb319340 Zea mays
Zm00001eb415140 Zea mays

User provided reference genes

Program Settings