Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p24150 Brassica napus
Aa31LG10G13060 Aethionema arabicum
Aa31LG1G24310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.985 Anthoceros agrestis
Actinidia22070 Actinidia chinensis
Actinidia38600 Actinidia chinensis
Ah.04g153030 Amaranthus hybridus
Ah.13g075550 Amaranthus hybridus
AL5G40260 Arabidopsis lyrata
Aqoxy2G00483 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4QW8I5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LHW1VF Arachis hypogaea
AT3G58490 Arabidopsis thaliana
ATR0001G036 Amborella trichopoda
Atru.chr8.1200 Acer truncatum
AUR62015294 Chenopodium quinoa
AUR62032743 Chenopodium quinoa
BcaB02g07520 Brassica carinata
BcaC08g44920 Brassica carinata
BolC6t37708H Brassica oleracea
BraA07t30059Z Brassica rapa
C06p25460 Brassica napus
CAN.G8.1 Capsicum annuum
CANSAT64G2835 Cannabis sativa
CARHR168890 Cardamine hirsuta
Carub.0005s2524 Capsella rubella
Ca_09100_v3 Cicer arietinum L.
CBR_g27899 Chara braunii
Cc06_g23350 Coffea canephora
CDE10G0990 Ceratophyllum demersum
Cfa020124 Carpinus fangiana
Cfa025525 Carpinus fangiana
Ciclev10011869m.g Citrus clementina
CiPaw.09G027000 Carya illinoinensis
CiPaw.10G024300 Carya illinoinensis
ClCG04G001360 Citrullus lanatus
COL.COLO4_29395 Corchorus olitorius
Cpa.g.sc85.30 Carica papaya
CsaV3_4G031170 Cucumis sativus L.
CSS0025313 Camellia sinensis var. sinensis
CSS0031126 Camellia sinensis var. sinensis
DCAR_013674 Daucus carota
DCAR_017041 Daucus carota
Dinv16340 Davidia involucrata
Dinv16341 Davidia involucrata
Dinv24034 Davidia involucrata
Duzib093G1906 Durio zibethinus
Duzib128G0581 Durio zibethinus
ECA238G1506 Erigeron canadensis
ECA248G1283 Erigeron canadensis
EL10Ac3g06851 Beta vulgaris
Eucgr.K01870 Eucalyptus grandis
FAN02G2738 Fragaria x ananassa
FAN05G5497 Fragaria x ananassa
FAN09G2092 Fragaria x ananassa
FAN14G3637 Fragaria x ananassa
FvH4_1g29340 Fragaria vesca
FvH4_6g21550 Fragaria vesca
Glyma.03G207000 Glycine max
Glyma.19G204500 Glycine max
Gohir.A09G129600 Gossypium hirsutum
Gohir.D09G125600 Gossypium hirsutum
Gorai.006G144600 Gossypium raimondii
GSVIVG01033434001 Vitis vinifera
HanXRQChr01g0024571 Helianthus annuus
HanXRQChr14g0438921 Helianthus annuus
Haze_20052 Corylus avellana
Haze_20059 Corylus avellana
Hma1.2p1_0124F.1_g058410 Hydrangea macrophylla
HPP92_007945 Vanilla planifolia
HPP92_020366 Vanilla planifolia
HPP92_020367 Vanilla planifolia
HPP92_023567 Vanilla planifolia
Hund19219 Selenicereus undatus
Lalb_Chr01g0017621 Lupinus albus
Lalb_Chr20g0111071 Lupinus albus
Lalb_Chr20g0111081 Lupinus albus
Lalb_Chr25g0287641 Lupinus albus
Lj1A1134T63 Lonicera japonica
Lj1g0004925 Lotus japonicus
Lj2A362T41 Lonicera japonica
Lsat_1_v5_gn_1_60360 Lactuca sativa
Lsat_1_v5_gn_2_57080 Lactuca sativa
Manes.08G040500 Manihot esculenta
Manes.09G040000 Manihot esculenta
Mapoly0023s0042 Marchantia polymorpha
MBI04_g09734_MAGBIO Magnolia biondii
MD12G1052800 Malus domestica
MD14G1051200 Malus domestica
Medtr7g107270 Medicago truncatula
MELO3C008990.2 Cucumis melo
Migut.J01865 Erythranthe guttata
Migut.J01871 Erythranthe guttata
MSTRG.26074 Avicennia marina
Nitab4.5_0002532g0010 Nicotiana tabacum
Nitab4.5_0005082g0030 Nicotiana tabacum
Nn7g35913 Nelumbo nucifera
Oeu057591.1 Olea europaea
Oeu063855.2 Olea europaea
Os03g0805400 Oryza sativa ssp. japonica
Peaxi162Scf00463g00322 Petunia axillaris
PGR142G4320 Punica granatum
PGSC0003DMG400001105 Solanum tuberosum
Phvul.001G200400 Phaseolus vulgaris
Potri.006G196200 Populus trichocarpa
Potri.016G062100 Populus trichocarpa
Pp3c11_15430 Physcomitrium patens
Pp3c2_26340 Physcomitrium patens
Prupe.7G084800 Prunus persica
Psat3g026000 Pisum sativum
PSO339G2581 Papaver somniferum
PSO339G4595 Papaver somniferum
PSO384G1868 Papaver somniferum
PSO384G4146 Papaver somniferum
QL07p025081 Quercus lobata
QL07p025096 Quercus lobata
QL10p026397 Quercus lobata
RcHm_v2.0_Chr2g0108291 Rosa chinensis
RcHm_v2.0_Chr2g0108301 Rosa chinensis
RcHm_v2.0_Chr3g0478791 Rosa chinensis
Rhsim03G0002700 Rhododendron simsii
Rhsim03G0002900 Rhododendron simsii
RhsimUnG0013900 Rhododendron simsii
RhsimUnG0014100 Rhododendron simsii
Sabra06G0150800 Salix brachista
Sabra16G0064000 Salix brachista
SalBow1G7250 Salvia bowleyana
SalBow6G2644 Salvia bowleyana
Sc13g0002510 Simmondsia chinensis
Sed0002439 Sechium edule
SEGI_41601 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46503 Striga asiatica
SHI30063 Sapria himalayana
SMO356G0032 Selaginella moellendorffii
Solyc03g051970.3 Solanum lycopersicum
Sopen03g011420 Solanum pennellii
Sp5g04380 Schrenkiella parvula
TAR623G0618 Trochodendron aralioides
TAR633G2404 Trochodendron aralioides
TAR636G0255 Trochodendron aralioides
THA.LOC104802772 Tarenaya hassleriana
Thecc.05G178700 Theobroma cacao
Thhalv10006516m.g Eutrema salsugineum
TPR.G32306 Trifolium pratense
TWI74G0273 Tripterygium wilfordii
TWI77G0767 Tripterygium wilfordii
vmacro12554 Vaccinium macrocarpon
VMungo1383G0203 Vigna mungo
Zm00001eb061460 Zea mays
Zm00001eb212610 Zea mays
Zm00001eb272460 Zea mays
Zm00001eb359710 Zea mays

User provided reference genes

Program Settings