Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14910 Brassica napus
Aa31LG7G5930 Aethionema arabicum
Actinidia07011 Actinidia chinensis
Actinidia37185 Actinidia chinensis
AL1G35040 Arabidopsis lyrata
Aqoxy1G01328 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GE5DD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4Q1DLP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V07RCD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WGUK12 Arachis hypogaea
AT1G21840 Arabidopsis thaliana
ATR0745G056 Amborella trichopoda
ATR0782G197 Amborella trichopoda
Atru.chr3.2942 Acer truncatum
AUR62000245 Chenopodium quinoa
BcaB08g37376 Brassica carinata
BcaB08g37377 Brassica carinata
BcaC06g34908 Brassica carinata
BcaC06g34909 Brassica carinata
BolC7t42723H Brassica oleracea
BraA07t29233Z Brassica rapa
C07p21890 Brassica napus
C07p21910 Brassica napus
CAN.G1097.5 Capsicum annuum
CANSAT54G0046 Cannabis sativa
CARHR022120 Cardamine hirsuta
Carub.0001s2129 Capsella rubella
Ca_06172_v3 Cicer arietinum L.
CBR_g27954 Chara braunii
CBR_g70735 Chara braunii
Cc00_g20630 Coffea canephora
CDE10G1192 Ceratophyllum demersum
Cfa007603 Carpinus fangiana
Ciclev10002295m.g Citrus clementina
CiPaw.13G145200 Carya illinoinensis
ClCG02G014970 Citrullus lanatus
COL.COLO4_35490 Corchorus olitorius
Cpa.g.sc36.59 Carica papaya
CsaV3_2G007030 Cucumis sativus L.
CSS0042269 Camellia sinensis var. sinensis
DCAR_018145 Daucus carota
Dinv15026 Davidia involucrata
Duzib041G0713 Durio zibethinus
ECA240G2819 Erigeron canadensis
EL10Ac4g10052 Beta vulgaris
Eucgr.B03769 Eucalyptus grandis
FAN02G1701 Fragaria x ananassa
FAN03G0677 Fragaria x ananassa
FAN06G1870 Fragaria x ananassa
FAN06G1945 Fragaria x ananassa
FAN14G4396 Fragaria x ananassa
FAN14G5331 Fragaria x ananassa
FAN15G0098 Fragaria x ananassa
FAN15G0420 Fragaria x ananassa
FAN15G2865 Fragaria x ananassa
FAN20G1197 Fragaria x ananassa
FAN20G2036 Fragaria x ananassa
FAN20G2051 Fragaria x ananassa
FAN20G2147 Fragaria x ananassa
FAN20G2315 Fragaria x ananassa
FAN21G0376 Fragaria x ananassa
FAN24G0871 Fragaria x ananassa
FAN24G0888 Fragaria x ananassa
FAN24G2371 Fragaria x ananassa
FAN24G3181 Fragaria x ananassa
FAN25G0846 Fragaria x ananassa
FAN25G1068 Fragaria x ananassa
FAN27G0319 Fragaria x ananassa
FAN27G1110 Fragaria x ananassa
FAN27G2021 Fragaria x ananassa
FvH4_2g00301 Fragaria vesca
FvH4_2g00490 Fragaria vesca
FvH4_2g00500 Fragaria vesca
FvH4_2g00510 Fragaria vesca
FvH4_2g01040 Fragaria vesca
FvH4_2g01511 Fragaria vesca
FvH4_2g01521 Fragaria vesca
FvH4_3g37402 Fragaria vesca
Glyma.02G276400 Glycine max
Glyma.14G039400 Glycine max
Gohir.A02G109100 Gossypium hirsutum
Gohir.D03G062100 Gossypium hirsutum
Gorai.013G107000 Gossypium raimondii
GSVIVG01037361001 Vitis vinifera
Haze_14485 Corylus avellana
Hma1.2p1_1843F.1_g305050 Hydrangea macrophylla
HPP92_011765 Vanilla planifolia
HPP92_011772 Vanilla planifolia
Lalb_Chr04g0249461 Lupinus albus
Lj1P989T20 Lonicera japonica
LjContig00564g0012926 Lotus japonicus
Manes.01G175400 Manihot esculenta
Mapoly0075s0047 Marchantia polymorpha
MBI13_g10954_MAGBIO Magnolia biondii
MCO04G443 Micromonas commoda
MD10G1003100 Malus domestica
MD12G1125400 Malus domestica
Medtr5g088570 Medicago truncatula
Medtr5g088615 Medicago truncatula
MELO3C004190.2 Cucumis melo
Migut.F00393 Erythranthe guttata
MSTRG.8775 Avicennia marina
Nitab4.5_0000832g0030 Nicotiana tabacum
Nitab4.5_0005379g0030 Nicotiana tabacum
Nn7g37079 Nelumbo nucifera
Oeu030259.1 Olea europaea
Os02g0168000 Oryza sativa ssp. japonica
Peaxi162Scf00192g00042 Petunia axillaris
PGR102G1558 Punica granatum
PGSC0003DMG400024255 Solanum tuberosum
Phvul.008G205100 Phaseolus vulgaris
Potri.001G224400 Populus trichocarpa
Pp3c21_1390 Physcomitrium patens
Prupe.8G030900 Prunus persica
Psat0s2829g0160 Pisum sativum
Psat0s4349g0080 Pisum sativum
PSO339G6668 Papaver somniferum
PSO384G4586 Papaver somniferum
QL01p020549 Quercus lobata
RcHm_v2.0_Chr1g0322261 Rosa chinensis
RcHm_v2.0_Chr1g0322271 Rosa chinensis
RcHm_v2.0_Chr1g0322441 Rosa chinensis
RcHm_v2.0_Chr1g0322461 Rosa chinensis
RcHm_v2.0_Chr1g0322541 Rosa chinensis
RcHm_v2.0_Chr1g0322581 Rosa chinensis
RcHm_v2.0_Chr1g0322591 Rosa chinensis
RcHm_v2.0_Chr1g0323071 Rosa chinensis
RcHm_v2.0_Chr6g0250481 Rosa chinensis
RcHm_v2.0_Chr6g0250811 Rosa chinensis
Rhsim13G0203600 Rhododendron simsii
Sabra16G0133100 Salix brachista
SalBow1G2364 Salvia bowleyana
SalBow4G0907 Salvia bowleyana
Sc06g0004840 Simmondsia chinensis
Sed0013542 Sechium edule
SEGI_07822 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01091 Striga asiatica
SHI10553 Sapria himalayana
SMO137G0182 Selaginella moellendorffii
Solyc03g031430.1 Solanum lycopersicum
Sopen03g005320 Solanum pennellii
Sp1g19390 Schrenkiella parvula
Thecc.08G138700 Theobroma cacao
Thhalv10009605m.g Eutrema salsugineum
TPR.G14628 Trifolium pratense
TWI31G0278 Tripterygium wilfordii
TWI79G1014 Tripterygium wilfordii
unitig_37.g12512 Utricularia gibba
unitig_46.g18777 Utricularia gibba
VMungo0647G0171 Vigna mungo
Zm00001eb232950 Zea mays

User provided reference genes

Program Settings