Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31160 Brassica napus
Aa31LG3G1350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis
Actinidia13638 Actinidia chinensis
Actinidia31636 Actinidia chinensis
Ah.11g051130 Amaranthus hybridus
AL3G50970 Arabidopsis lyrata
AL4G14440 Arabidopsis lyrata
AL4G34450 Arabidopsis lyrata
AL4G38670 Arabidopsis lyrata
Aqoxy2G01672 Aquilegia oxysepala
Aqoxy5G02193 Aquilegia oxysepala
Aqoxy6G02064 Aquilegia oxysepala
Aqoxy6G02070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea
AT2G40780 Arabidopsis thaliana
ATR0733G227 Amborella trichopoda
ATR1127G058 Amborella trichopoda
ATR1127G178 Amborella trichopoda
Atru.chr12.194 Acer truncatum
AUR62008150 Chenopodium quinoa
AUR62028732 Chenopodium quinoa
BcaB01g03515 Brassica carinata
BcaB05g22749 Brassica carinata
BcaB06g29175 Brassica carinata
BcaC02g12879 Brassica carinata
BolC3t20430H Brassica oleracea
BolC4t28355H Brassica oleracea
BraA04t18571Z Brassica rapa
C01p26050 Brassica napus
C03p81600 Brassica napus
C04p68560 Brassica napus
CAN.G1229.8 Capsicum annuum
CANSAT64G1352 Cannabis sativa
CANSAT64G2122 Cannabis sativa
CARHR135880 Cardamine hirsuta
Carub.0004s2308 Capsella rubella
Ca_16858_v3 Cicer arietinum L.
Ca_29506_v3 Cicer arietinum L.
Cc02_g05210 Coffea canephora
CDE07G1038 Ceratophyllum demersum
Ciclev10032334m.g Citrus clementina
CiPaw.02G093900 Carya illinoinensis
CiPaw.04G175300 Carya illinoinensis
CiPaw.04G175400 Carya illinoinensis
ClCG07G004830 Citrullus lanatus
COL.COLO4_19475 Corchorus olitorius
Cpa.g.sc128.23 Carica papaya
Cre03.g155800 Chlamydomonas reinhardtii
CsaV3_5G010740 Cucumis sativus L.
CSS0007534 Camellia sinensis var. sinensis
Dinv21858 Davidia involucrata
Dinv37250 Davidia involucrata
Duzib106G1237 Durio zibethinus
Duzib114G0677 Durio zibethinus
ECA247G1702 Erigeron canadensis
EL10Ac5g10661 Beta vulgaris
Eucgr.G03147 Eucalyptus grandis
FAN03G2458 Fragaria x ananassa
FAN06G0183 Fragaria x ananassa
FAN10G2920 Fragaria x ananassa
FAN12G2601 Fragaria x ananassa
FAN17G0734 Fragaria x ananassa
FvH4_4g04970 Fragaria vesca
FvH4_7g26120 Fragaria vesca
Glyma.06G141500 Glycine max
Gohir.A10G177600 Gossypium hirsutum
Gohir.D10G184200 Gossypium hirsutum
Gorai.011G206400 Gossypium raimondii
GSVIVG01038577001 Vitis vinifera
HanXRQChr07g0204961 Helianthus annuus
HanXRQChr14g0460541 Helianthus annuus
Haze_17370 Corylus avellana
HPP92_015433 Vanilla planifolia
Lalb_Chr11g0067701 Lupinus albus
Lj1g0004349 Lotus japonicus
Lj6g0009237 Lotus japonicus
Lj8A52T23 Lonicera japonica
Lsat_1_v5_gn_2_126741 Lactuca sativa
Lsat_1_v5_gn_5_104800 Lactuca sativa
Manes.10G044800 Manihot esculenta
Mapoly0014s0200 Marchantia polymorpha
MBI15_g39395_MAGBIO Magnolia biondii
MCO11G196 Micromonas commoda
MD01G1169400 Malus domestica
Medtr3g093790 Medicago truncatula
MELO3C020110.2 Cucumis melo
Migut.A00831 Erythranthe guttata
Migut.F01232 Erythranthe guttata
MSTRG.8381 Avicennia marina
Nitab4.5_0000171g0270 Nicotiana tabacum
Nitab4.5_0001671g0020 Nicotiana tabacum
Nitab4.5_0006356g0050 Nicotiana tabacum
Nitab4.5_0008902g0030 Nicotiana tabacum
Nn1g06656 Nelumbo nucifera
Nn2g10267 Nelumbo nucifera
Oeu006067.1 Olea europaea
Oeu022421.1 Olea europaea
Oeu023361.1 Olea europaea
Oeu030320.1 Olea europaea
Oeu030971.1 Olea europaea
Oeu032829.1 Olea europaea
Oeu036804.1 Olea europaea
Oeu040434.1 Olea europaea
Oeu061582.1 Olea europaea
Oeu063069.1 Olea europaea
Os03g0114200 Oryza sativa ssp. japonica
Peaxi162Scf00073g02225 Petunia axillaris
Peaxi162Scf00167g01129 Petunia axillaris
PGR142G0395 Punica granatum
PGR142G2846 Punica granatum
PGSC0003DMG400011645 Solanum tuberosum
PGSC0003DMG400020604 Solanum tuberosum
Phvul.005G185900 Phaseolus vulgaris
Phvul.009G042700 Phaseolus vulgaris
Potri.019G061200 Populus trichocarpa
Pp3c16_8280 Physcomitrium patens
Prupe.2G265600 Prunus persica
Psat5g069360 Pisum sativum
PSO170G6098 Papaver somniferum
PSO675G4155 Papaver somniferum
QL08p065087 Quercus lobata
RcHm_v2.0_Chr1g0372561 Rosa chinensis
Rhsim03G0153600 Rhododendron simsii
Rhsim04G0113200 Rhododendron simsii
Sabra19G0074800 Salix brachista
SalBow7G3110 Salvia bowleyana
Sc10g0003050 Simmondsia chinensis
Sed0020097 Sechium edule
SEGI_18121 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00887 Striga asiatica
SMO347G0178 Selaginella moellendorffii
Solyc05g052180.3 Solanum lycopersicum
Sopen03g025590 Solanum pennellii
Sopen05g030710 Solanum pennellii
Sp4g23100 Schrenkiella parvula
TAR636G2293 Trochodendron aralioides
THA.LOC104803220 Tarenaya hassleriana
THA.LOC104808402 Tarenaya hassleriana
THA.LOC104824370 Tarenaya hassleriana
Thecc.10G185000 Theobroma cacao
Thhalv10017311m.g Eutrema salsugineum
TPR.G13975 Trifolium pratense
TPR.G24790 Trifolium pratense
TPR.G28952 Trifolium pratense
TWI09G0651 Tripterygium wilfordii
TWI53G0120 Tripterygium wilfordii
unitig_736.g22953 Utricularia gibba
vmacro06902 Vaccinium macrocarpon
VMungo1309G0380 Vigna mungo
Zm00001eb000910 Zea mays
Zm00001eb290470 Zea mays

User provided reference genes

Program Settings