Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33990 Brassica napus
A05p42480 Brassica napus
A06p37760 Brassica napus
Aa31LG11G8840 Aethionema arabicum
Aa31LG5G15350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis
Actinidia33836 Actinidia chinensis
Ah.04g160130 Amaranthus hybridus
Ah.06g192760 Amaranthus hybridus
AL3G15480 Arabidopsis lyrata
Aqoxy5G00612 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea
AT3G05100 Arabidopsis thaliana
ATR0618G246 Amborella trichopoda
Atru.chr2.656 Acer truncatum
AUR62000953 Chenopodium quinoa
AUR62005015 Chenopodium quinoa
BcaB04g19280 Brassica carinata
BcaB04g21374 Brassica carinata
BcaC01g04334 Brassica carinata
BcaC05g29994 Brassica carinata
BcaNung04260 Brassica carinata
BcaNung04261 Brassica carinata
BcaNung04262 Brassica carinata
BolC1t05715H Brassica oleracea
BolC3t16420H Brassica oleracea
BolC5t34872H Brassica oleracea
BolC7t44582H Brassica oleracea
BraA03t12574Z Brassica rapa
BraA05t23004Z Brassica rapa
BraA06t26695Z Brassica rapa
C03p41370 Brassica napus
C05p62140 Brassica napus
C07p40470 Brassica napus
CAN.G134.187 Capsicum annuum
CANSAT54G1013 Cannabis sativa
CARHR079420 Cardamine hirsuta
CARHR185710 Cardamine hirsuta
Carub.0003s0434 Capsella rubella
Carub.0006s2543 Capsella rubella
Ca_13816_v3 Cicer arietinum L.
Cc02_g31280 Coffea canephora
CDE08G0242 Ceratophyllum demersum
Cfa006482 Carpinus fangiana
Ciclev10001724m.g Citrus clementina
CiPaw.07G009000 Carya illinoinensis
CiPaw.08G177900 Carya illinoinensis
ClCG03G010920 Citrullus lanatus
COL.COLO4_13636 Corchorus olitorius
Cpa.g.c47757 Carica papaya
Cpa.g.sc117.39 Carica papaya
CsaV3_1G044760 Cucumis sativus L.
CSS0000773 Camellia sinensis var. sinensis
CSS0010529 Camellia sinensis var. sinensis
CSS0028974 Camellia sinensis var. sinensis
CSS0039857 Camellia sinensis var. sinensis
DCAR_022833 Daucus carota
Dinv02602 Davidia involucrata
Dinv02605 Davidia involucrata
Dinv17742 Davidia involucrata
Duzib177G0825 Durio zibethinus
ECA246G2619 Erigeron canadensis
EL10Ac4g09208 Beta vulgaris
Eucgr.H04401 Eucalyptus grandis
FAN02G0279 Fragaria x ananassa
FAN05G2179 Fragaria x ananassa
FAN05G5662 Fragaria x ananassa
FAN09G4706 Fragaria x ananassa
FAN14G3773 Fragaria x ananassa
FvH4_6g03940 Fragaria vesca
Glyma.01G139000 Glycine max
Glyma.03G028300 Glycine max
Gohir.A11G257000 Gossypium hirsutum
Gohir.D11G266800 Gossypium hirsutum
Gorai.007G286600 Gossypium raimondii
GSVIVG01021894001 Vitis vinifera
HanXRQChr05g0161431 Helianthus annuus
HanXRQChr14g0447091 Helianthus annuus
Haze_04309 Corylus avellana
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla
HPP92_011336 Vanilla planifolia
HPP92_016882 Vanilla planifolia
HPP92_028573 Vanilla planifolia
Hund07000 Selenicereus undatus
Lalb_Chr12g0208121 Lupinus albus
Lalb_Chr13g0291821 Lupinus albus
Lj3g0018370 Lotus japonicus
Lj7C479T1 Lonicera japonica
Lj7C479T9 Lonicera japonica
Lj9A672G84 Lonicera japonica
Lsat_1_v5_gn_5_121600 Lactuca sativa
Lsat_1_v5_gn_9_40320 Lactuca sativa
Manes.09G157900 Manihot esculenta
MBI18_g14729_MAGBIO Magnolia biondii
MD04G1217100 Malus domestica
MD12G1234100 Malus domestica
Medtr4g025410 Medicago truncatula
MELO3C010076.2 Cucumis melo
Migut.B00327 Erythranthe guttata
MSTRG.12666 Avicennia marina
MSTRG.13789 Avicennia marina
Nitab4.5_0002361g0200 Nicotiana tabacum
Nitab4.5_0002840g0160 Nicotiana tabacum
Nn3g21303 Nelumbo nucifera
Nn4g26018 Nelumbo nucifera
Oeu012475.1 Olea europaea
Oeu027042.1 Olea europaea
Os07g0667400 Oryza sativa ssp. japonica
Peaxi162Scf00225g00143 Petunia axillaris
PGR004G1913 Punica granatum
PGSC0003DMG400022466 Solanum tuberosum
Phvul.010G080900 Phaseolus vulgaris
Potri.005G046300 Populus trichocarpa
Potri.013G034000 Populus trichocarpa
Pp3c9_1110 Physcomitrium patens
Prupe.6G337200 Prunus persica
Psat7g231080 Pisum sativum
PSO170G6220 Papaver somniferum
PSO210G5882 Papaver somniferum
QL03p000170 Quercus lobata
QL03p000506 Quercus lobata
RcHm_v2.0_Chr3g0452511 Rosa chinensis
Rhsim05G0148800 Rhododendron simsii
Sabra05G0042300 Salix brachista
Sabra13G0033200 Salix brachista
SalBow2G0736 Salvia bowleyana
Sc09g0003690 Simmondsia chinensis
Sed0014615 Sechium edule
Sed0017257 Sechium edule
SEGI_16580 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36132 Striga asiatica
SHI18307 Sapria himalayana
SHI18309 Sapria himalayana
SMO203G0024 Selaginella moellendorffii
Solyc01g098040.3 Solanum lycopersicum
Sopen01g041620 Solanum pennellii
Sp2g20350 Schrenkiella parvula
Sp3g03920 Schrenkiella parvula
TAR365G1069 Trochodendron aralioides
TAR636G1948 Trochodendron aralioides
Thecc.05G291500 Theobroma cacao
Thhalv10004543m.g Eutrema salsugineum
Thhalv10021106m.g Eutrema salsugineum
TPR.G39359 Trifolium pratense
TPR.G7590 Trifolium pratense
TWI12G1223 Tripterygium wilfordii
TWI36G0026 Tripterygium wilfordii
unitig_8.g3689 Utricularia gibba
vmacro05392 Vaccinium macrocarpon
VMungo0331G1201 Vigna mungo
Zm00001eb110980 Zea mays

User provided reference genes

Program Settings