Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18560 Brassica napus
A05p12800 Brassica napus
Aa31LG5G4500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.141 Anthoceros agrestis
Actinidia15860 Actinidia chinensis
Actinidia15861 Actinidia chinensis
Actinidia15862 Actinidia chinensis
Actinidia21571 Actinidia chinensis
Ah.13g072190 Amaranthus hybridus
Ah.13g072200 Amaranthus hybridus
AL4G28350 Arabidopsis lyrata
Aqoxy2G00085 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea
AT2G32850 Arabidopsis thaliana
ATR0605G176 Amborella trichopoda
Atru.chr11.2686 Acer truncatum
AUR62008272 Chenopodium quinoa
AUR62031032 Chenopodium quinoa
BcaB01g03940 Brassica carinata
BcaB02g10502 Brassica carinata
BcaB07g32332 Brassica carinata
BcaC01g05864 Brassica carinata
BolC3t14546H Brassica oleracea
BraA03t11115Z Brassica rapa
BraA05t20218Z Brassica rapa
C03p21620 Brassica napus
C04p16700 Brassica napus
CAN.G1393.5 Capsicum annuum
CAN.G3313.1 Capsicum annuum
CANSAT11G0209 Cannabis sativa
CARHR126800 Cardamine hirsuta
Carub.0004s1428 Capsella rubella
Ca_25995_v3 Cicer arietinum L.
CBR_g39313 Chara braunii
Cc02_g27130 Coffea canephora
Cc02_g27140 Coffea canephora
CDE04G0833 Ceratophyllum demersum
CDE04G1629 Ceratophyllum demersum
CDE07G1317 Ceratophyllum demersum
CDE10G0497 Ceratophyllum demersum
CDE10G0581 Ceratophyllum demersum
Cfa010718 Carpinus fangiana
Ciclev10030862m.g Citrus clementina
CiPaw.13G001300 Carya illinoinensis
ClCG10G012610 Citrullus lanatus
Cpa.g.sc189.30 Carica papaya
Cre07.g323100 Chlamydomonas reinhardtii
CsaV3_3G032420 Cucumis sativus L.
CSS0003709 Camellia sinensis var. sinensis
CSS0017046 Camellia sinensis var. sinensis
DCAR_019318 Daucus carota
DCAR_029621 Daucus carota
Dinv43486 Davidia involucrata
Dinv43920 Davidia involucrata
Dinv43921 Davidia involucrata
Duzib133G0042 Durio zibethinus
Duzib138G1711 Durio zibethinus
ECA234G3341 Erigeron canadensis
EL10Ac3g04943 Beta vulgaris
EL10Ac5g10816 Beta vulgaris
Eucgr.I00278 Eucalyptus grandis
FAN01G2199 Fragaria x ananassa
FAN03G1960 Fragaria x ananassa
FAN06G4114 Fragaria x ananassa
FvH4_7g00210 Fragaria vesca
Glyma.08G150000 Glycine max
Glyma.15G269800 Glycine max
Gohir.A08G053200 Gossypium hirsutum
Gohir.D08G062800 Gossypium hirsutum
Gorai.004G065000 Gossypium raimondii
GSVIVG01001400001 Vitis vinifera
GSVIVG01001401001 Vitis vinifera
HanXRQChr01g0018711 Helianthus annuus
HanXRQChr17g0560591 Helianthus annuus
Haze_03260 Corylus avellana
HPP92_023783 Vanilla planifolia
Hund24874 Selenicereus undatus
Lalb_Chr19g0131991 Lupinus albus
Lalb_Chr25g0283481 Lupinus albus
Lalb_Chr25g0283491 Lupinus albus
Lj3g0015556 Lotus japonicus
Lj7A565T27 Lonicera japonica
Lj9C624G5 Lonicera japonica
Manes.07G001200 Manihot esculenta
Mapoly0022s0104 Marchantia polymorpha
MCO08G073 Micromonas commoda
MD14G1085700 Malus domestica
MD14G1085800 Malus domestica
Medtr3g026250 Medicago truncatula
MELO3C023945.2 Cucumis melo
Migut.B01348 Erythranthe guttata
MSTRG.26297 Avicennia marina
Nitab4.5_0000892g0050 Nicotiana tabacum
Nitab4.5_0002332g0050 Nicotiana tabacum
Nitab4.5_0003792g0030 Nicotiana tabacum
Nn2g15647 Nelumbo nucifera
Nn7g36027 Nelumbo nucifera
Oeu013590.1 Olea europaea
Oeu046529.3 Olea europaea
Os02g0591900 Oryza sativa ssp. japonica
Os09g0279100 Oryza sativa ssp. japonica
Peaxi162Scf00058g00820 Petunia axillaris
Peaxi162Scf00081g00024 Petunia axillaris
PGR031G3548 Punica granatum
PGSC0003DMG402006333 Solanum tuberosum
Phvul.005G063700 Phaseolus vulgaris
Potri.001G228100 Populus trichocarpa
Pp3c8_15370 Physcomitrium patens
PRCOL_00004715 Prasinoderma coloniale
Prupe.2G004800 Prunus persica
Psat5g206720 Pisum sativum
PSO339G0402 Papaver somniferum
PSO384G4425 Papaver somniferum
QL04p000390 Quercus lobata
QL04p002433 Quercus lobata
QL04p002463 Quercus lobata
QL04p002518 Quercus lobata
RcHm_v2.0_Chr1g0313561 Rosa chinensis
RcHm_v2.0_Chr1g0313571 Rosa chinensis
RcHm_v2.0_Chr1g0313621 Rosa chinensis
RcHm_v2.0_Chr1g0313631 Rosa chinensis
Rhsim01G0132300 Rhododendron simsii
Sabra16G0136000 Salix brachista
SalBow5G2297 Salvia bowleyana
SalBow6G3292 Salvia bowleyana
Sc01g0010400 Simmondsia chinensis
Sed0010975 Sechium edule
Sed0025822 Sechium edule
SEGI_25422 Sequoiadendron giganteum
SGA_v2.0_scaffold260G45878 Striga asiatica
SGA_v2.0_scaffold5G03115 Striga asiatica
SMO147G0308 Selaginella moellendorffii
Solyc01g074010.4 Solanum lycopersicum
Sopen01g033570 Solanum pennellii
Sp4g15230 Schrenkiella parvula
TAR369G0777 Trochodendron aralioides
TAR633G0624 Trochodendron aralioides
THA.LOC104801018 Tarenaya hassleriana
THA.LOC104816028 Tarenaya hassleriana
Thecc.01G415900 Theobroma cacao
Thhalv10016354m.g Eutrema salsugineum
TPR.G12241 Trifolium pratense
TWI53G1678 Tripterygium wilfordii
TWI73G0181 Tripterygium wilfordii
unitig_26.g9595 Utricularia gibba
unitig_749.g13484 Utricularia gibba
vmacro21161 Vaccinium macrocarpon
VMungo1080G0666 Vigna mungo
Zm00001eb094370 Zea mays
Zm00001eb183460 Zea mays
Zm00001eb245770 Zea mays
Zm00001eb344610 Zea mays

User provided reference genes

Program Settings