Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34570 Brassica napus
A06p42030 Brassica napus
Aa31LG2G6120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis
Actinidia00239 Actinidia chinensis
Ah.04g163010 Amaranthus hybridus
AL5G15180 Arabidopsis lyrata
Aqoxy6G00342 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea
AT3G26410 Arabidopsis thaliana
ATR1136G066 Amborella trichopoda
Atru.chr6.1121 Acer truncatum
AUR62003397 Chenopodium quinoa
AUR62004780 Chenopodium quinoa
BcaB07g30229 Brassica carinata
BcaC03g17340 Brassica carinata
BcaC03g17366 Brassica carinata
BcaNung06886 Brassica carinata
BolC2t11366H Brassica oleracea
BolC2t11379H Brassica oleracea
BolC2t11381H Brassica oleracea
BolC7t44069H Brassica oleracea
BraA02t08465Z Brassica rapa
BraA06t27120Z Brassica rapa
C02p52870 Brassica napus
C02p53050 Brassica napus
C02p53070 Brassica napus
C07p35450 Brassica napus
CAN.G1.65 Capsicum annuum
CANSAT54G0577 Cannabis sativa
CARHR147430 Cardamine hirsuta
Carub.0005s0438 Capsella rubella
Ca_25384_v3 Cicer arietinum L.
Ca_29817_v3 Cicer arietinum L.
Ca_29818_v3 Cicer arietinum L.
Ca_31280_v3 Cicer arietinum L.
CBR_g37214 Chara braunii
Cc02_g18820 Coffea canephora
CDE02G2941 Ceratophyllum demersum
Cfa010153 Carpinus fangiana
Cfa010154 Carpinus fangiana
Cfa021801 Carpinus fangiana
Ciclev10008412m.g Citrus clementina
Ciclev10015108m.g Citrus clementina
CiPaw.13G145700 Carya illinoinensis
ClCG09G014610 Citrullus lanatus
COL.COLO4_33088 Corchorus olitorius
Cpa.g.sc845.1 Carica papaya
Cre08.g359100 Chlamydomonas reinhardtii
CsaV3_7G014950 Cucumis sativus L.
CsaV3_7G014960 Cucumis sativus L.
CsaV3_7G014970 Cucumis sativus L.
CsaV3_7G014980 Cucumis sativus L.
CsaV3_7G015000 Cucumis sativus L.
CsaV3_7G015010 Cucumis sativus L.
CsaV3_7G022230 Cucumis sativus L.
CsaV3_UNG187480 Cucumis sativus L.
CsaV3_UNG189490 Cucumis sativus L.
CsaV3_UNG197500 Cucumis sativus L.
CSS0014529 Camellia sinensis var. sinensis
CSS0027197 Camellia sinensis var. sinensis
DCAR_021834 Daucus carota
Dinv24234 Davidia involucrata
Duzib132G0210 Durio zibethinus
ECA240G2004 Erigeron canadensis
EL10Ac4g08938 Beta vulgaris
Eucgr.G00660 Eucalyptus grandis
FAN02G3155 Fragaria x ananassa
FAN05G4126 Fragaria x ananassa
FAN05G4337 Fragaria x ananassa
FAN09G3019 Fragaria x ananassa
FAN14G4788 Fragaria x ananassa
FAN14G5837 Fragaria x ananassa
FvH4_6g05370 Fragaria vesca
Glyma.05G121000 Glycine max
Glyma.08G075600 Glycine max
Gohir.A01G012300 Gossypium hirsutum
Gohir.A13G061500 Gossypium hirsutum
Gohir.D01G013500 Gossypium hirsutum
Gohir.D13G060400 Gossypium hirsutum
Gorai.002G015300 Gossypium raimondii
Gorai.013G068500 Gossypium raimondii
GSVIVG01029751001 Vitis vinifera
HanXRQChr03g0065771 Helianthus annuus
Haze_23539 Corylus avellana
HPP92_004630 Vanilla planifolia
HPP92_004639 Vanilla planifolia
Hund06875 Selenicereus undatus
Lalb_Chr07g0189371 Lupinus albus
Lj4g0019477 Lotus japonicus
Lj5A244T54 Lonicera japonica
Lj9A317G73 Lonicera japonica
Lsat_1_v5_gn_9_117961 Lactuca sativa
Manes.14G165200 Manihot esculenta
Mapoly0006s0193 Marchantia polymorpha
MBI06_g20970_MAGBIO Magnolia biondii
MCO05G371 Micromonas commoda
MCO05G740 Micromonas commoda
MD12G1223100 Malus domestica
Medtr4g094315 Medicago truncatula
MELO3C012691.2 Cucumis melo
Migut.B00646 Erythranthe guttata
MSTRG.16558 Avicennia marina
Nitab4.5_0000078g0200 Nicotiana tabacum
Nitab4.5_0005079g0020 Nicotiana tabacum
Nn1g06191 Nelumbo nucifera
Oeu000228.1 Olea europaea
Os02g0556400 Oryza sativa ssp. japonica
Peaxi162Scf00003g03739 Petunia axillaris
PGR042G3925 Punica granatum
PGSC0003DMG400017691 Solanum tuberosum
Phvul.002G205600 Phaseolus vulgaris
Potri.001G207000 Populus trichocarpa
Potri.003G022650 Populus trichocarpa
Potri.003G022701 Populus trichocarpa
Pp3c13_18080 Physcomitrium patens
PRCOL_00003583 Prasinoderma coloniale
Prupe.6G329700 Prunus persica
Psat7g096360 Pisum sativum
PSO541G6054 Papaver somniferum
PSO675G5038 Papaver somniferum
QL01p020593 Quercus lobata
RcHm_v2.0_Chr3g0454151 Rosa chinensis
Rhsim11G0133700 Rhododendron simsii
Sabra01G0160300 Salix brachista
SalBow5G3806 Salvia bowleyana
SalBow5G4932 Salvia bowleyana
Sc09g0004450 Simmondsia chinensis
Sed0027136 Sechium edule
SEGI_00112 Sequoiadendron giganteum
SEGI_34202 Sequoiadendron giganteum
SGA_v2.0_scaffold332G48937 Striga asiatica
SHI16537 Sapria himalayana
SMO115G0021 Selaginella moellendorffii
Solyc10g047120.2 Solanum lycopersicum
Sopen10g017280 Solanum pennellii
Sp2g15560 Schrenkiella parvula
TAR116G0002 Trochodendron aralioides
TAR628G0087 Trochodendron aralioides
TAR628G0283 Trochodendron aralioides
THA.LOC104818254 Tarenaya hassleriana
Thecc.02G156500 Theobroma cacao
Thhalv10004120m.g Eutrema salsugineum
TPR.G31479 Trifolium pratense
TWI23G0249 Tripterygium wilfordii
unitig_26.g9584 Utricularia gibba
unitig_26.g9585 Utricularia gibba
unitig_26.g9586 Utricularia gibba
vmacro01803 Vaccinium macrocarpon
VMungo0251G1232 Vigna mungo
Zm00001eb243830 Zea mays

User provided reference genes

Program Settings