Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p63980 Brassica napus
Aa31LG6G12880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3169 Anthoceros agrestis
Actinidia27235 Actinidia chinensis
Actinidia28721 Actinidia chinensis
Ah.03g149180 Amaranthus hybridus
AL1G51100 Arabidopsis lyrata
AL7G15110 Arabidopsis lyrata
Aqoxy5G01828 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.67ZU0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCQ68S Arachis hypogaea
AT4G35930 Arabidopsis thaliana
Atru.chr3.870 Acer truncatum
Atru.chr3.873 Acer truncatum
AUR62003332 Chenopodium quinoa
AUR62029512 Chenopodium quinoa
BcaNung05052 Brassica carinata
BolC7t46569H Brassica oleracea
BraA03t15465Z Brassica rapa
C07p61440 Brassica napus
CAN.G126.19 Capsicum annuum
CAN.G2331.2 Capsicum annuum
CAN.G289.46 Capsicum annuum
CAN.G354.49 Capsicum annuum
CANSAT01G1088 Cannabis sativa
CARHR244330 Cardamine hirsuta
Carub.0007s0429 Capsella rubella
Ca_03631_v3 Cicer arietinum L.
CBR_g66688 Chara braunii
Cc00_g15560 Coffea canephora
Cc07_g11120 Coffea canephora
CDE02G1334 Ceratophyllum demersum
CDE05G1953 Ceratophyllum demersum
Cfa007007 Carpinus fangiana
Cfa007008 Carpinus fangiana
Cfa012064 Carpinus fangiana
Ciclev10026280m.g Citrus clementina
CiPaw.07G061400 Carya illinoinensis
ClCG10G000560 Citrullus lanatus
COL.COLO4_22468 Corchorus olitorius
Cpa.g.sc6.293 Carica papaya
CsaV3_3G000640 Cucumis sativus L.
CSS0021454 Camellia sinensis var. sinensis
DCAR_010139 Daucus carota
DCAR_014039 Daucus carota
Dinv08570 Davidia involucrata
Dinv33667 Davidia involucrata
Dinv40122 Davidia involucrata
Duzib147G1106 Durio zibethinus
Duzib264G0687 Durio zibethinus
ECA232G4489 Erigeron canadensis
ECA234G4600 Erigeron canadensis
ECA238G3415 Erigeron canadensis
EL10Ac6g15516 Beta vulgaris
Eucgr.J02473 Eucalyptus grandis
FAN19G1263 Fragaria x ananassa
FAN26G1727 Fragaria x ananassa
FAN28G0434 Fragaria x ananassa
FvH4_1g11320 Fragaria vesca
Glyma.02G045900 Glycine max
Glyma.16G123900 Glycine max
Gohir.A02G172700 Gossypium hirsutum
Gohir.A11G173200 Gossypium hirsutum
Gohir.D03G007200 Gossypium hirsutum
Gohir.D11G180200 Gossypium hirsutum
Gorai.003G007500 Gossypium raimondii
Gorai.007G192100 Gossypium raimondii
GSVIVG01006513001 Vitis vinifera
HanXRQChr04g0112761 Helianthus annuus
HanXRQChr13g0414571 Helianthus annuus
HanXRQChr14g0441771 Helianthus annuus
HanXRQChr15g0487221 Helianthus annuus
Haze_03721 Corylus avellana
Haze_03726 Corylus avellana
Haze_03744 Corylus avellana
Hma1.2p1_0315F.1_g122370 Hydrangea macrophylla
Hma1.2p1_0869F.1_g230670 Hydrangea macrophylla
Hma1.2p1_2620F.1_g325560 Hydrangea macrophylla
HPP92_020724 Vanilla planifolia
Hund14064 Selenicereus undatus
Lalb_Chr09g0334231 Lupinus albus
Lj4A223T35 Lonicera japonica
Lj4g0003896 Lotus japonicus
Lsat_1_v5_gn_2_75700 Lactuca sativa
Manes.01G149100 Manihot esculenta
MBI04_g35562_MAGBIO Magnolia biondii
MBI05_g33209_MAGBIO Magnolia biondii
MBI08_g41172_MAGBIO Magnolia biondii
MD02G1127300 Malus domestica
MD15G1241500 Malus domestica
Medtr8g075190 Medicago truncatula
MELO3C013752.2 Cucumis melo
Migut.H02183 Erythranthe guttata
MSTRG.2733 Avicennia marina
Nitab4.5_0001685g0060 Nicotiana tabacum
Nitab4.5_0001789g0090 Nicotiana tabacum
Nitab4.5_0004653g0010 Nicotiana tabacum
Nitab4.5_0007831g0010 Nicotiana tabacum
Nn5g30794 Nelumbo nucifera
Oeu041083.1 Olea europaea
Os10g0438500 Oryza sativa ssp. japonica
Peaxi162Scf00328g00051 Petunia axillaris
Peaxi162Scf00635g00084 Petunia axillaris
PGR102G1053 Punica granatum
PGSC0003DMG400003650 Solanum tuberosum
PGSC0003DMG400022527 Solanum tuberosum
Phvul.003G265700 Phaseolus vulgaris
Potri.005G110200 Populus trichocarpa
Pp3c20_19230 Physcomitrium patens
Pp3c23_12690 Physcomitrium patens
Pp3c24_3500 Physcomitrium patens
Pp3c9_8080 Physcomitrium patens
Prupe.6G141800 Prunus persica
Prupe.7G172500 Prunus persica
Psat4g101760 Pisum sativum
PSO170G2109 Papaver somniferum
QL06p051243 Quercus lobata
RcHm_v2.0_Chr2g0098831 Rosa chinensis
Rhsim08G0031700 Rhododendron simsii
Sabra05G0090400 Salix brachista
SalBow3G1445 Salvia bowleyana
SalBow3G4058 Salvia bowleyana
Sc03g0003720 Simmondsia chinensis
Sc16g0001960 Simmondsia chinensis
Sed0009244 Sechium edule
Sed0012496 Sechium edule
SEGI_02906 Sequoiadendron giganteum
SEGI_03921 Sequoiadendron giganteum
SEGI_18984 Sequoiadendron giganteum
SEGI_23955 Sequoiadendron giganteum
SEGI_39032 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00975 Striga asiatica
SMO339G0067 Selaginella moellendorffii
SMO367G0386 Selaginella moellendorffii
Solyc03g033390.3 Solanum lycopersicum
Sopen03g006160 Solanum pennellii
Sp7g33710 Schrenkiella parvula
TAR376G0516 Trochodendron aralioides
TAR628G0932 Trochodendron aralioides
TAR628G0994 Trochodendron aralioides
THA.LOC104819741 Tarenaya hassleriana
Thecc.01G013900 Theobroma cacao
Thhalv10025800m.g Eutrema salsugineum
TPR.G19498 Trifolium pratense
TWI09G1074 Tripterygium wilfordii
TWI53G0158 Tripterygium wilfordii
unitig_736.g22723 Utricularia gibba
vmacro18429 Vaccinium macrocarpon
VMungo0251G3709 Vigna mungo
VMungo1215G1794 Vigna mungo
Zm00001eb047460 Zea mays
Zm00001eb222730 Zea mays

User provided reference genes

Program Settings