Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01210 Brassica napus
A08p22870 Brassica napus
Aa31LG6G14730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis
Actinidia36402 Actinidia chinensis
Ah.03g139600 Amaranthus hybridus
AL7G12840 Arabidopsis lyrata
Aqoxy6G01531 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0N5P6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HTA6FY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea
AT4G37830 Arabidopsis thaliana
ATR0767G115 Amborella trichopoda
Atru.chr3.1087 Acer truncatum
AUR62003145 Chenopodium quinoa
AUR62007965 Chenopodium quinoa
BcaC01g00373 Brassica carinata
BolC1t00134H Brassica oleracea
BolC3t20143H Brassica oleracea
BraA01t00120Z Brassica rapa
BraA08t34250Z Brassica rapa
C01p01370 Brassica napus
C03p79020 Brassica napus
CAN.G1061.6 Capsicum annuum
CANSAT01G1371 Cannabis sativa
CARHR246220 Cardamine hirsuta
Carub.0007s0239 Capsella rubella
Ca_22084_v3 Cicer arietinum L.
CBR_g50891 Chara braunii
Cc07_g07610 Coffea canephora
CDE01G0584 Ceratophyllum demersum
CDE02G3413 Ceratophyllum demersum
Cfa006798 Carpinus fangiana
Ciclev10026828m.g Citrus clementina
CiPaw.07G039500 Carya illinoinensis
CiPaw.08G148200 Carya illinoinensis
CiPaw.10G150100 Carya illinoinensis
ClCG10G008050 Citrullus lanatus
COL.COLO4_11647 Corchorus olitorius
Cpa.g.sc129.47 Carica papaya
CsaV3_3G007040 Cucumis sativus L.
CSS0003752 Camellia sinensis var. sinensis
CSS0011371 Camellia sinensis var. sinensis
CSS0041224 Camellia sinensis var. sinensis
CSS0047057 Camellia sinensis var. sinensis
DCAR_021459 Daucus carota
DCAR_025838 Daucus carota
Dinv23069 Davidia involucrata
Dinv26980 Davidia involucrata
Duzib147G0425 Durio zibethinus
Duzib187G0061 Durio zibethinus
Duzib264G0490 Durio zibethinus
ECA232G2479 Erigeron canadensis
ECA238G2402 Erigeron canadensis
EL10Ac6g14949 Beta vulgaris
Eucgr.I00649 Eucalyptus grandis
FAN19G1409 Fragaria x ananassa
FAN23G1848 Fragaria x ananassa
FAN26G1754 Fragaria x ananassa
FAN28G0049 Fragaria x ananassa
FvH4_1g18620 Fragaria vesca
Glyma.05G110100 Glycine max
Glyma.17G157000 Glycine max
Gohir.A02G148000 Gossypium hirsutum
Gohir.A11G210700 Gossypium hirsutum
Gohir.D03G032400 Gossypium hirsutum
Gohir.D11G212400 Gossypium hirsutum
Gorai.003G034000 Gossypium raimondii
Gorai.007G228300 Gossypium raimondii
GSVIVG01006593001 Vitis vinifera
HanXRQChr07g0203771 Helianthus annuus
HanXRQChr09g0263081 Helianthus annuus
HanXRQChr14g0447621 Helianthus annuus
Haze_03960 Corylus avellana
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla
HPP92_024955 Vanilla planifolia
Hund16598 Selenicereus undatus
Lalb_Chr05g0220461 Lupinus albus
Lalb_Chr09g0329381 Lupinus albus
Lalb_Chr16g0385901 Lupinus albus
Lj4g0010254 Lotus japonicus
Lsat_1_v5_gn_2_81581 Lactuca sativa
Lsat_1_v5_gn_4_159121 Lactuca sativa
Manes.12G119200 Manihot esculenta
Manes.13G106700 Manihot esculenta
Mapoly0043s0104 Marchantia polymorpha
MBI16_g05028_MAGBIO Magnolia biondii
MBI16_g31809_MAGBIO Magnolia biondii
MCO08G099 Micromonas commoda
MD02G1193900 Malus domestica
MD15G1304000 Malus domestica
Medtr4g097800 Medicago truncatula
MELO3C014946.2 Cucumis melo
Migut.L00438 Erythranthe guttata
MSTRG.23644 Avicennia marina
Nitab4.5_0000396g0060 Nicotiana tabacum
Nitab4.5_0002639g0030 Nicotiana tabacum
Nitab4.5_0007790g0010 Nicotiana tabacum
Nitab4.5_0026287g0010 Nicotiana tabacum
Nn5g30705 Nelumbo nucifera
Nn6g34570 Nelumbo nucifera
Oeu014311.1 Olea europaea
Oeu061526.2 Olea europaea
Os03g0772800 Oryza sativa ssp. japonica
Peaxi162Scf00096g01525 Petunia axillaris
Peaxi162Scf00118g01314 Petunia axillaris
PGR102G0524 Punica granatum
PGSC0003DMG400017913 Solanum tuberosum
PGSC0003DMG400030258 Solanum tuberosum
PGSC0003DMG400030628 Solanum tuberosum
Phvul.003G231600 Phaseolus vulgaris
Potri.007G008800 Populus trichocarpa
Pp3c13_15160 Physcomitrium patens
Pp3c5_3360 Physcomitrium patens
Pp3c6_25050 Physcomitrium patens
PRCOL_00006369 Prasinoderma coloniale
Prupe.6G213100 Prunus persica
Psat4g088320 Pisum sativum
PSO675G0895 Papaver somniferum
QL06p038187 Quercus lobata
RcHm_v2.0_Chr2g0109411 Rosa chinensis
Rhsim08G0089100 Rhododendron simsii
Sabra07G0006800 Salix brachista
SalBow3G1594 Salvia bowleyana
SalBow3G4557 Salvia bowleyana
Sc03g0000690 Simmondsia chinensis
Sc16g0000840 Simmondsia chinensis
Sed0006730 Sechium edule
SEGI_12659 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33088 Striga asiatica
SHI12046 Sapria himalayana
Solyc02g091880.4 Solanum lycopersicum
Solyc03g043850.3 Solanum lycopersicum
Sopen02g036450 Solanum pennellii
Sp7g35470 Schrenkiella parvula
TAR381G0631 Trochodendron aralioides
TAR628G1120 Trochodendron aralioides
THA.LOC104804193 Tarenaya hassleriana
THA.LOC104807646 Tarenaya hassleriana
THA.LOC104824932 Tarenaya hassleriana
Thecc.01G079800 Theobroma cacao
Thhalv10026651m.g Eutrema salsugineum
TPR.G22417 Trifolium pratense
TWI74G1540 Tripterygium wilfordii
TWI77G0309 Tripterygium wilfordii
unitig_37.g12385 Utricularia gibba
unitig_46.g18678 Utricularia gibba
vmacro18001 Vaccinium macrocarpon
vmacro22430 Vaccinium macrocarpon
VMungo0251G0206 Vigna mungo
Zm00001eb058950 Zea mays

User provided reference genes

Program Settings