Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44030 Brassica napus
A03p44050 Brassica napus
A07p07260 Brassica napus
Aa31LG8G11930 Aethionema arabicum
Aa31LG9G4920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis
Actinidia09471 Actinidia chinensis
Actinidia23713 Actinidia chinensis
Ah.03g146210 Amaranthus hybridus
Ah.15g093470 Amaranthus hybridus
AL3G40790 Arabidopsis lyrata
AL706U10010 Arabidopsis lyrata
Aqoxy1G00113 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea
AT3G25100 Arabidopsis thaliana
ATR0068G062 Amborella trichopoda
ATR0498G001 Amborella trichopoda
Atru.chr6.1420 Acer truncatum
AUR62016553 Chenopodium quinoa
AUR62016554 Chenopodium quinoa
AUR62038821 Chenopodium quinoa
AUR62043704 Chenopodium quinoa
BcaB06g26724 Brassica carinata
BcaB08g34434 Brassica carinata
BcaC01g03244 Brassica carinata
BcaC06g35779 Brassica carinata
BolC3t17728H Brassica oleracea
BolC7t41562H Brassica oleracea
BraA03t13534Z Brassica rapa
BraA03t13535Z Brassica rapa
BraA07t28514Z Brassica rapa
C03p54420 Brassica napus
C07p10970 Brassica napus
CAN.G128.1 Capsicum annuum
CAN.G186.61 Capsicum annuum
CAN.G186.62 Capsicum annuum
CAN.G186.63 Capsicum annuum
CAN.G257.5 Capsicum annuum
CANSAT01G2121 Cannabis sativa
CARHR101430 Cardamine hirsuta
Carub.0003s2543 Capsella rubella
Ca_06554_v3 Cicer arietinum L.
CBR_g23402 Chara braunii
CBR_g23403 Chara braunii
CBR_g40148 Chara braunii
Cc01_g16780 Coffea canephora
CDE02G4608 Ceratophyllum demersum
CDE04G0889 Ceratophyllum demersum
CDE07G1728 Ceratophyllum demersum
Cfa004377 Carpinus fangiana
Ciclev10019411m.g Citrus clementina
CiPaw.01G049500 Carya illinoinensis
CiPaw.02G023000 Carya illinoinensis
ClCG09G008800 Citrullus lanatus
COL.COLO4_15628 Corchorus olitorius
Cpa.g.sc43.113 Carica papaya
Cre06.g270250 Chlamydomonas reinhardtii
CsaV3_7G026150 Cucumis sativus L.
CSS0009877 Camellia sinensis var. sinensis
CSS0030898 Camellia sinensis var. sinensis
CSS0034871 Camellia sinensis var. sinensis
CSS0045377 Camellia sinensis var. sinensis
DCAR_004725 Daucus carota
DCAR_004733 Daucus carota
Dinv12655 Davidia involucrata
Dinv19180 Davidia involucrata
Duzib133G1132 Durio zibethinus
Duzib138G1868 Durio zibethinus
ECA233G3738 Erigeron canadensis
ECA236G0997 Erigeron canadensis
EL10Ac7g17891 Beta vulgaris
Eucgr.H00778 Eucalyptus grandis
FAN15G3437 Fragaria x ananassa
FAN24G1506 Fragaria x ananassa
FAN27G1226 Fragaria x ananassa
FvH4_2g18640 Fragaria vesca
Glyma.08G349400 Glycine max
Glyma.18G167000 Glycine max
Gohir.A07G199500 Gossypium hirsutum
Gohir.A07G199600 Gossypium hirsutum
Gohir.A11G139300 Gossypium hirsutum
Gohir.D07G205900 Gossypium hirsutum
Gohir.D07G206000 Gossypium hirsutum
Gohir.D11G145500 Gossypium hirsutum
Gorai.001G232100 Gossypium raimondii
Gorai.001G232300 Gossypium raimondii
Gorai.007G156000 Gossypium raimondii
GSVIVG01000797001 Vitis vinifera
HanXRQChr10g0288791 Helianthus annuus
HanXRQChr14g0439971 Helianthus annuus
Haze_15035 Corylus avellana
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla
HPP92_007506 Vanilla planifolia
Lalb_Chr03g0041521 Lupinus albus
Lj1g0018468 Lotus japonicus
Lj3C839T9 Lonicera japonica
Lsat_1_v5_gn_8_89600 Lactuca sativa
Manes.13G048900 Manihot esculenta
Mapoly0045s0042 Marchantia polymorpha
MBI19_g34091_MAGBIO Magnolia biondii
MCO03G169 Micromonas commoda
MD05G1172300 Malus domestica
MD10G1160500 Malus domestica
Medtr7g056153 Medicago truncatula
MELO3C021058.2 Cucumis melo
Migut.D02501 Erythranthe guttata
MSTRG.18839 Avicennia marina
Nitab4.5_0000045g0440 Nicotiana tabacum
Nitab4.5_0007437g0010 Nicotiana tabacum
Nn7g37081 Nelumbo nucifera
Oeu037767.1 Olea europaea
Os11g0128400 Oryza sativa ssp. japonica
Os12g0124700 Oryza sativa ssp. japonica
Peaxi162Scf00238g00032 Petunia axillaris
PGSC0003DMG400027946 Solanum tuberosum
Phvul.008G130700 Phaseolus vulgaris
Potri.015G090600 Populus trichocarpa
Pp3c23_19980 Physcomitrium patens
PRCOL_00002078 Prasinoderma coloniale
Prupe.8G199700 Prunus persica
Psat3g148200 Pisum sativum
PSO384G4190 Papaver somniferum
QL09p051756 Quercus lobata
QL09p052469 Quercus lobata
RcHm_v2.0_Chr6g0284201 Rosa chinensis
Rhsim09G0044900 Rhododendron simsii
Sabra02G0118100 Salix brachista
Sabra10G0126900 Salix brachista
Sabra15G0112700 Salix brachista
SalBow6G4054 Salvia bowleyana
Sc17g0002190 Simmondsia chinensis
Sed0013559 Sechium edule
SEGI_13565 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08333 Striga asiatica
SMO307G0064 Selaginella moellendorffii
Solyc09g059440.1 Solanum lycopersicum
Sopen09g022590 Solanum pennellii
Sp3g22680 Schrenkiella parvula
TAR376G0972 Trochodendron aralioides
TAR623G1093 Trochodendron aralioides
THA.LOC104808789 Tarenaya hassleriana
Thecc.01G221500 Theobroma cacao
Thhalv10002454m.g Eutrema salsugineum
TPR.G6418 Trifolium pratense
TWI36G0697 Tripterygium wilfordii
unitig_736.g22343 Utricularia gibba
unitig_899.g15017 Utricularia gibba
VMungo1383G0658 Vigna mungo
Zm00001eb163660 Zea mays
Zm00001eb163670 Zea mays
Zm00001eb405460 Zea mays

User provided reference genes

Program Settings