Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23990 Brassica napus
Aa31LG2G2120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.993 Anthoceros agrestis
Actinidia08788 Actinidia chinensis
Actinidia20814 Actinidia chinensis
Actinidia20815 Actinidia chinensis
Actinidia24517 Actinidia chinensis
Actinidia27036 Actinidia chinensis
Ah.02g111010 Amaranthus hybridus
AL2G19340 Arabidopsis lyrata
Aqoxy2G03682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BXG275 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NF9HU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UCI1EL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VYGS4N Arachis hypogaea
AT1G64880 Arabidopsis thaliana
ATR0787G085 Amborella trichopoda
ATR0994G019 Amborella trichopoda
Atru.chr11.646 Acer truncatum
AUR62008058 Chenopodium quinoa
AUR62028634 Chenopodium quinoa
BcaB05g23595 Brassica carinata
BcaC03g16030 Brassica carinata
BolC2t09800H Brassica oleracea
BraA02t07394Z Brassica rapa
C02p37840 Brassica napus
CAN.G691.8 Capsicum annuum
CANSAT01G3202 Cannabis sativa
CARHR056280 Cardamine hirsuta
Carub.0002s0996 Capsella rubella
Ca_17637_v3 Cicer arietinum L.
CBR_g50476 Chara braunii
Cc09_g04170 Coffea canephora
CDE02G1790 Ceratophyllum demersum
CDE06G0392 Ceratophyllum demersum
Cfa016106 Carpinus fangiana
Cfa025590 Carpinus fangiana
Ciclev10031158m.g Citrus clementina
CiPaw.06G036900 Carya illinoinensis
ClCG02G007790 Citrullus lanatus
ClCG02G007800 Citrullus lanatus
COL.COLO4_12970 Corchorus olitorius
Cpa.g.sc34.168 Carica papaya
Cre09.g407100 Chlamydomonas reinhardtii
CsaV3_2G035950 Cucumis sativus L.
CSS0035891 Camellia sinensis var. sinensis
DCAR_008779 Daucus carota
Dinv29371 Davidia involucrata
Duzib106G1281 Durio zibethinus
Duzib128G1329 Durio zibethinus
ECA246G2460 Erigeron canadensis
ECA246G3904 Erigeron canadensis
EL10Ac5g10580 Beta vulgaris
Eucgr.A00913 Eucalyptus grandis
FAN01G0391 Fragaria x ananassa
FAN03G1643 Fragaria x ananassa
FAN10G2942 Fragaria x ananassa
FvH4_7g34290 Fragaria vesca
Glyma.04G079800 Glycine max
Glyma.06G081400 Glycine max
Gohir.A13G158200 Gossypium hirsutum
Gohir.D13G162900 Gossypium hirsutum
Gorai.013G185100 Gossypium raimondii
GSVIVG01020716001 Vitis vinifera
HanXRQChr08g0228141 Helianthus annuus
HanXRQChr17g0540681 Helianthus annuus
Haze_00351 Corylus avellana
Haze_00352 Corylus avellana
Hma1.2p1_2196F.1_g316850 Hydrangea macrophylla
Hma1.2p1_2196F.1_g316860 Hydrangea macrophylla
Hma1.2p1_2196F.1_g316870 Hydrangea macrophylla
Hma1.2p1_3283F.1_g334850 Hydrangea macrophylla
HPP92_005346 Vanilla planifolia
Hund19699 Selenicereus undatus
Lalb_Chr01g0022101 Lupinus albus
Lj3A883T54 Lonicera japonica
Lj3g0009966 Lotus japonicus
LjContig00389g0015553 Lotus japonicus
Lsat_1_v5_gn_3_23200 Lactuca sativa
Manes.08G159500 Manihot esculenta
Mapoly0098s0036 Marchantia polymorpha
MBI07_g19429_MAGBIO Magnolia biondii
MBI09_g39943_MAGBIO Magnolia biondii
MBI09_g43839_MAGBIO Magnolia biondii
MBI10_g03402_MAGBIO Magnolia biondii
MBI10_g06902_MAGBIO Magnolia biondii
MBI11_g24763_MAGBIO Magnolia biondii
MBI12_g31452_MAGBIO Magnolia biondii
MBI12_g39868_MAGBIO Magnolia biondii
MBI14_g09475_MAGBIO Magnolia biondii
MCO11G545 Micromonas commoda
MD06G1015700 Malus domestica
MD07G1311200 Malus domestica
MD09G1008200 Malus domestica
MD14G1141700 Malus domestica
Medtr8g093680 Medicago truncatula
MELO3C024747.2 Cucumis melo
MSTRG.27417 Avicennia marina
Nitab4.5_0001003g0170 Nicotiana tabacum
Nitab4.5_0005243g0030 Nicotiana tabacum
Nn1g05840 Nelumbo nucifera
Nn4g24557 Nelumbo nucifera
Oeu010173.1 Olea europaea
Oeu036566.1 Olea europaea
Os02g0102400 Oryza sativa ssp. japonica
Peaxi162Scf00254g00512 Petunia axillaris
PGR031G1011 Punica granatum
PGSC0003DMG402016246 Solanum tuberosum
Phvul.009G105500 Phaseolus vulgaris
Potri.013G076200 Populus trichocarpa
Pp3c8_16260 Physcomitrium patens
PRCOL_00002029 Prasinoderma coloniale
Prupe.2G329900 Prunus persica
Psat7g046360 Pisum sativum
PSO017G3120 Papaver somniferum
PSO170G2140 Papaver somniferum
PSO339G3159 Papaver somniferum
PSO764G0174 Papaver somniferum
RcHm_v2.0_Chr1g0384661 Rosa chinensis
RcHm_v2.0_Chr3g0482781 Rosa chinensis
RcHm_v2.0_Chr3g0482791 Rosa chinensis
RcHm_v2.0_Chr3g0482801 Rosa chinensis
RcHm_v2.0_Chr3g0482811 Rosa chinensis
RcHm_v2.0_Chr4g0404671 Rosa chinensis
Rhsim03G0240200 Rhododendron simsii
Sabra13G0065400 Salix brachista
SalBow1G3109 Salvia bowleyana
SalBow1G4067 Salvia bowleyana
SalBow1G4565 Salvia bowleyana
SalBow1G5096 Salvia bowleyana
SalBow1G6742 Salvia bowleyana
SalBow1G7753 Salvia bowleyana
SalBow1G8063 Salvia bowleyana
SalBow1G8714 Salvia bowleyana
Sc17g0001530 Simmondsia chinensis
Sed0012488 Sechium edule
SEGI_25717 Sequoiadendron giganteum
SGA_v2.0_scaffold75G25015 Striga asiatica
SMO361G0506 Selaginella moellendorffii
Solyc11g008710.2 Solanum lycopersicum
Sopen11g004490 Solanum pennellii
Sp5g19120 Schrenkiella parvula
TAR628G1149 Trochodendron aralioides
THA.LOC104823793 Tarenaya hassleriana
Thecc.05G226800 Theobroma cacao
Thhalv10002490m.g Eutrema salsugineum
TPR.G37402 Trifolium pratense
TWI60G1536 Tripterygium wilfordii
unitig_736.g22500 Utricularia gibba
vmacro07474 Vaccinium macrocarpon
VMungo0540G0464 Vigna mungo
Zm00001eb229290 Zea mays

User provided reference genes

Program Settings