Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09880 Brassica napus
A03p50790 Brassica napus
Aa31LG6G570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1258 Anthoceros agrestis
Actinidia03377 Actinidia chinensis
Actinidia25960 Actinidia chinensis
Actinidia28173 Actinidia chinensis
Ah.12g054980 Amaranthus hybridus
AL7G36700 Arabidopsis lyrata
Aqoxy3G02383 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00HL0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IM2DA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MBF31G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RD5L31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XXZT2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y05B39 Arachis hypogaea
AT4G17830 Arabidopsis thaliana
ATR0049G003 Amborella trichopoda
Atru.chr6.1718 Acer truncatum
AUR62007282 Chenopodium quinoa
AUR62018722 Chenopodium quinoa
BcaC09g51599 Brassica carinata
BcaNung00053 Brassica carinata
BolC1t01126H Brassica oleracea
BolC7t45428H Brassica oleracea
BraA01t00932Z Brassica rapa
BraA03t14168Z Brassica rapa
C01p11580 Brassica napus
C07p49180 Brassica napus
CAN.G1381.2 Capsicum annuum
CANSAT21G2632 Cannabis sativa
CARHR224550 Cardamine hirsuta
Carub.0007s2353 Capsella rubella
Ca_24651_v3 Cicer arietinum L.
CBR_g51240 Chara braunii
Cc00_g30170 Coffea canephora
Cc06_g05830 Coffea canephora
Cc08_g02610 Coffea canephora
Cc11_g03830 Coffea canephora
CDE11G0367 Ceratophyllum demersum
Cfa012428 Carpinus fangiana
Ciclev10031569m.g Citrus clementina
CiPaw.11G092600 Carya illinoinensis
ClCG09G012020 Citrullus lanatus
ClCG09G012030 Citrullus lanatus
ClCG09G012040 Citrullus lanatus
COL.COLO4_17049 Corchorus olitorius
Cpa.g.sc239.6 Carica papaya
Cre02.g105500 Chlamydomonas reinhardtii
CsaV3_3G049270 Cucumis sativus L.
CsaV3_3G049280 Cucumis sativus L.
CSS0027944 Camellia sinensis var. sinensis
DCAR_031774 Daucus carota
Dinv25211 Davidia involucrata
Dinv28952 Davidia involucrata
Duzib084G0351 Durio zibethinus
Duzib205G2010 Durio zibethinus
ECA233G2661 Erigeron canadensis
EL10Ac5g12130 Beta vulgaris
Eucgr.D02190 Eucalyptus grandis
FAN04G0574 Fragaria x ananassa
FAN08G3086 Fragaria x ananassa
FAN13G0589 Fragaria x ananassa
FAN18G1246 Fragaria x ananassa
FvH4_5g21890 Fragaria vesca
Glyma.01G198600 Glycine max
Glyma.11G043300 Glycine max
Gohir.A03G001400 Gossypium hirsutum
Gohir.D03G170933 Gossypium hirsutum
Gorai.003G181400 Gossypium raimondii
GSVIVG01013167001 Vitis vinifera
HanXRQChr06g0178401 Helianthus annuus
HanXRQChr10g0285061 Helianthus annuus
Haze_08241 Corylus avellana
Hma1.2p1_0090F.1_g045780 Hydrangea macrophylla
Hma1.2p1_0991F.1_g245100 Hydrangea macrophylla
HPP92_001566 Vanilla planifolia
HPP92_001721 Vanilla planifolia
Lalb_Chr05g0213951 Lupinus albus
Lalb_Chr16g0379121 Lupinus albus
Lj2A240G35 Lonicera japonica
Lj2g0005935 Lotus japonicus
Lsat_1_v5_gn_6_64460 Lactuca sativa
Manes.17G013000 Manihot esculenta
Mapoly0013s0175 Marchantia polymorpha
MCO07G613 Micromonas commoda
MD02G1199500 Malus domestica
MD06G1033100 Malus domestica
MD06G1033200 Malus domestica
MD15G1380000 Malus domestica
MD16G1275900 Malus domestica
Medtr5g014410 Medicago truncatula
MELO3C003398.2 Cucumis melo
MELO3C003399.2 Cucumis melo
MELO3C003400.2 Cucumis melo
Migut.E00931 Erythranthe guttata
MSTRG.1982 Avicennia marina
Nitab4.5_0001963g0010 Nicotiana tabacum
Nitab4.5_0008181g0010 Nicotiana tabacum
Nn1g00519 Nelumbo nucifera
Nn6g33598 Nelumbo nucifera
Oeu006991.2 Olea europaea
Os02g0690800 Oryza sativa ssp. japonica
Peaxi162Scf00460g00615 Petunia axillaris
PGR031G0111 Punica granatum
PGSC0003DMG400017513 Solanum tuberosum
Phvul.002G007200 Phaseolus vulgaris
Potri.001G143200 Populus trichocarpa
Potri.003G091100 Populus trichocarpa
Pp3c6_20970 Physcomitrium patens
Prupe.5G038300 Prunus persica
Psat2g173240 Pisum sativum
Psat2g173320 Pisum sativum
PSO063G6489 Papaver somniferum
QL12p005631 Quercus lobata
RcHm_v2.0_Chr7g0209441 Rosa chinensis
Rhsim11G0014400 Rhododendron simsii
Sabra01G0111700 Salix brachista
Sabra03G0060800 Salix brachista
Sc01g0007470 Simmondsia chinensis
Sc02g0006900 Simmondsia chinensis
Sc03g0003930 Simmondsia chinensis
Sc22g0003350 Simmondsia chinensis
Sc22g0003360 Simmondsia chinensis
Sed0011615 Sechium edule
Sed0023890 Sechium edule
SEGI_04366 Sequoiadendron giganteum
SEGI_19032 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09279 Striga asiatica
SHI07365 Sapria himalayana
SHI07370 Sapria himalayana
SHI07376 Sapria himalayana
SHI07377 Sapria himalayana
SMO116G0259 Selaginella moellendorffii
SMO116G0465 Selaginella moellendorffii
SMO353G0234 Selaginella moellendorffii
Solyc08g076970.3 Solanum lycopersicum
Solyc08g076980.4 Solanum lycopersicum
Solyc08g076990.3 Solanum lycopersicum
Sopen08g025550 Solanum pennellii
Sopen08g025560 Solanum pennellii
Sopen08g025570 Solanum pennellii
Sp7g16280 Schrenkiella parvula
TAR629G1238 Trochodendron aralioides
THA.LOC104827763 Tarenaya hassleriana
Thecc.03G228700 Theobroma cacao
Thhalv10025214m.g Eutrema salsugineum
TWI15G0149 Tripterygium wilfordii
unitig_21.g20382 Utricularia gibba
vmacro00333 Vaccinium macrocarpon
VMungo1215G1005 Vigna mungo
Zm00001eb251190 Zea mays

User provided reference genes

Program Settings