Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09400 Brassica napus
A03p60030 Brassica napus
A10p20450 Brassica napus
Aa31LG11G10460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2192 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1673 Anthoceros agrestis
Actinidia23503 Actinidia chinensis
Ah.04g154300 Amaranthus hybridus
AL6G30630 Arabidopsis lyrata
Aqoxy2G03291 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.75KEF6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1U343 Arachis hypogaea
AT5G19180 Arabidopsis thaliana
ATR0626G348 Amborella trichopoda
Atru.chr10.33 Acer truncatum
Atru.chr4.2537 Acer truncatum
AUR62038065 Chenopodium quinoa
AUR62038191 Chenopodium quinoa
BcaB01g04873 Brassica carinata
BcaB01g05137 Brassica carinata
BcaB08g36596 Brassica carinata
BcaC04g18590 Brassica carinata
BolC3t13567H Brassica oleracea
BolC9t58573H Brassica oleracea
BraA03t10258Z Brassica rapa
BraA10t44115Z Brassica rapa
C03p10980 Brassica napus
C09p57080 Brassica napus
CAN.G69.23 Capsicum annuum
CANSAT78G0899 Cannabis sativa
CARHR193770 Cardamine hirsuta
Carub.0006s1751 Capsella rubella
Ca_21102_v3 Cicer arietinum L.
CBR_g30851 Chara braunii
Cc03_g03260 Coffea canephora
CDE05G3222 Ceratophyllum demersum
CDE11G0641 Ceratophyllum demersum
Cfa015600 Carpinus fangiana
Ciclev10006509m.g Citrus clementina
CiPaw.01G161400 Carya illinoinensis
ClCG05G005350 Citrullus lanatus
COL.COLO4_26630 Corchorus olitorius
Cpa.g.sc147.13 Carica papaya
Cre12.g491500 Chlamydomonas reinhardtii
CsaV3_3G013600 Cucumis sativus L.
CSS0004513 Camellia sinensis var. sinensis
DCAR_027166 Daucus carota
Dinv38407 Davidia involucrata
Dinv44492 Davidia involucrata
Duzib151G0519 Durio zibethinus
Duzib212G0178 Durio zibethinus
ECA236G3497 Erigeron canadensis
EL10Ac2g03353 Beta vulgaris
EL10Ac9g22370 Beta vulgaris
EL10As3g23293 Beta vulgaris
Eucgr.H03570 Eucalyptus grandis
Eucgr.H03572 Eucalyptus grandis
FAN07G1248 Fragaria x ananassa
FAN12G0879 Fragaria x ananassa
FAN17G1787 Fragaria x ananassa
FAN19G0755 Fragaria x ananassa
FAN19G3009 Fragaria x ananassa
FAN22G1365 Fragaria x ananassa
FAN23G0290 Fragaria x ananassa
FAN26G1719 Fragaria x ananassa
FAN28G0659 Fragaria x ananassa
FvH4_1g25030 Fragaria vesca
FvH4_4g14790 Fragaria vesca
Glyma.07G258000 Glycine max
Glyma.17G016000 Glycine max
Gohir.A09G213680 Gossypium hirsutum
Gohir.D09G216000 Gossypium hirsutum
Gorai.006G236400 Gossypium raimondii
GSVIVG01017905001 Vitis vinifera
HanXRQChr16g0508681 Helianthus annuus
Haze_00945 Corylus avellana
Haze_27108 Corylus avellana
Hma1.2p1_0511F.1_g169010 Hydrangea macrophylla
HPP92_001335 Vanilla planifolia
Hund12176 Selenicereus undatus
Lalb_Chr18g0056171 Lupinus albus
Lalb_Chr20g0118511 Lupinus albus
Lj4g0022520 Lotus japonicus
Lj6A574T38 Lonicera japonica
Lj6C576T2 Lonicera japonica
Lsat_1_v5_gn_9_81160 Lactuca sativa
Manes.03G182800 Manihot esculenta
Manes.15G024600 Manihot esculenta
Mapoly0032s0081 Marchantia polymorpha
MBI19_g14315_MAGBIO Magnolia biondii
MCO07G571 Micromonas commoda
MD13G1185500 Malus domestica
MD16G1186500 Malus domestica
Medtr4g131690 Medicago truncatula
MELO3C006555.2 Cucumis melo
Migut.G00304 Erythranthe guttata
MSTRG.10007 Avicennia marina
MSTRG.4003 Avicennia marina
Nitab4.5_0000630g0030 Nicotiana tabacum
Nitab4.5_0012513g0010 Nicotiana tabacum
Nn1g02186 Nelumbo nucifera
Oeu030323.1 Olea europaea
Oeu059240.1 Olea europaea
Os01g0271500 Oryza sativa ssp. japonica
Peaxi162Scf00134g02031 Petunia axillaris
PGR142G0613 Punica granatum
PGSC0003DMG400008991 Solanum tuberosum
Phvul.003G091500 Phaseolus vulgaris
Potri.008G204000 Populus trichocarpa
Potri.010G031900 Populus trichocarpa
Pp3c19_5590 Physcomitrium patens
Pp3c21_10350 Physcomitrium patens
PRCOL_00002962 Prasinoderma coloniale
Prupe.1G153200 Prunus persica
Psat4g008440 Pisum sativum
PSO170G1707 Papaver somniferum
PSO302G0110 Papaver somniferum
QL05p054428 Quercus lobata
QL06p003788 Quercus lobata
RcHm_v2.0_Chr1g0328651 Rosa chinensis
RcHm_v2.0_Chr1g0343821 Rosa chinensis
RcHm_v2.0_Chr4g0417521 Rosa chinensis
Rhsim04G0203300 Rhododendron simsii
Sabra08G0157700 Salix brachista
SalBow1G6287 Salvia bowleyana
SalBow2G0641 Salvia bowleyana
SalBow7G2194 Salvia bowleyana
SalBow8G2518 Salvia bowleyana
Sc13g0004120 Simmondsia chinensis
Sed0000406 Sechium edule
Sed0011286 Sechium edule
SEGI_19294 Sequoiadendron giganteum
SGA_v2.0_scaffold237G43812 Striga asiatica
SHI00393 Sapria himalayana
SMO141G0184 Selaginella moellendorffii
Solyc01g079840.3 Solanum lycopersicum
Sopen01g031590 Solanum pennellii
Sp6g25195 Schrenkiella parvula
TAR362G1319 Trochodendron aralioides
TAR633G1443 Trochodendron aralioides
Thecc.04G224600 Theobroma cacao
Thhalv10013467m.g Eutrema salsugineum
TPR.G37111 Trifolium pratense
TWI09G1150 Tripterygium wilfordii
TWI73G0956 Tripterygium wilfordii
unitig_748.g8344 Utricularia gibba
vmacro00753 Vaccinium macrocarpon
vmacro19618 Vaccinium macrocarpon
vmacro19827 Vaccinium macrocarpon
VMungo1215G1989 Vigna mungo
Zm00001eb332890 Zea mays
Zm00001eb346970 Zea mays

User provided reference genes

Program Settings