Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p14580 Brassica napus
Aa31LG6G2350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis
Actinidia22396 Actinidia chinensis
Ah.02g126290 Amaranthus hybridus
AL7G34050 Arabidopsis lyrata
AL7G34080 Arabidopsis lyrata
AL7G34150 Arabidopsis lyrata
Aqoxy1G01449 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26KT5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DSI1DH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCL750 Arachis hypogaea
AT4G19900 Arabidopsis thaliana
ATR0763G002 Amborella trichopoda
Atru.chr10.533 Acer truncatum
Atru.chr10.537 Acer truncatum
AUR62003215 Chenopodium quinoa
AUR62008037 Chenopodium quinoa
AUR62022464 Chenopodium quinoa
AUR62024532 Chenopodium quinoa
BcaB03g11645 Brassica carinata
BcaC01g00643 Brassica carinata
BolC3t20538H Brassica oleracea
BraA08t33444Z Brassica rapa
C03p82150 Brassica napus
CAN.G149.35 Capsicum annuum
CAN.G358.73 Capsicum annuum
CANSAT35G1894 Cannabis sativa
CARHR226680 Cardamine hirsuta
Carub.0007s2131 Capsella rubella
Ca_08517_v3 Cicer arietinum L.
Ca_18763_v3 Cicer arietinum L.
Cc09_g06070 Coffea canephora
CDE02G3340 Ceratophyllum demersum
CDE05G1435 Ceratophyllum demersum
Cfa000710 Carpinus fangiana
Ciclev10014513m.g Citrus clementina
CiPaw.09G077200 Carya illinoinensis
CiPaw.10G064700 Carya illinoinensis
ClCG01G025720 Citrullus lanatus
COL.COLO4_30993 Corchorus olitorius
Cpa.g.sc135.8 Carica papaya
CsaV3_6G052960 Cucumis sativus L.
CSS0017265 Camellia sinensis var. sinensis
DCAR_007788 Daucus carota
Dinv25911 Davidia involucrata
Dinv25912 Davidia involucrata
Duzib160G0177 Durio zibethinus
Duzib235G0624 Durio zibethinus
ECA238G4765 Erigeron canadensis
EL10Ac2g03656 Beta vulgaris
EL10Ac5g12737 Beta vulgaris
FAN16G1950 Fragaria x ananassa
FAN21G0923 Fragaria x ananassa
FAN25G0040 Fragaria x ananassa
FAN25G1789 Fragaria x ananassa
FvH4_3g12290 Fragaria vesca
Glyma.07G221700 Glycine max
Glyma.11G097851 Glycine max
Glyma.20G020100 Glycine max
Gohir.A05G145600 Gossypium hirsutum
Gohir.D05G148000 Gossypium hirsutum
Gorai.009G152200 Gossypium raimondii
GSVIVG01012068001 Vitis vinifera
HanXRQChr14g0447411 Helianthus annuus
HPP92_015950 Vanilla planifolia
HPP92_015964 Vanilla planifolia
Hund22216 Selenicereus undatus
Lalb_Chr03g0024651 Lupinus albus
Lalb_Chr16g0385221 Lupinus albus
Lj1A1145G19 Lonicera japonica
Lj4g0026898 Lotus japonicus
Lsat_1_v5_gn_2_63860 Lactuca sativa
Lsat_1_v5_gn_4_63080 Lactuca sativa
Manes.16G057700 Manihot esculenta
Mapoly0045s0054 Marchantia polymorpha
MBI18_g11477_MAGBIO Magnolia biondii
MD05G1251700 Malus domestica
MD10G1232500 Malus domestica
Medtr4g075580 Medicago truncatula
Medtr4g084060 Medicago truncatula
MELO3C007013.2 Cucumis melo
Migut.M01981 Erythranthe guttata
MSTRG.13293 Avicennia marina
Nitab4.5_0000818g0090 Nicotiana tabacum
Nitab4.5_0001288g0210 Nicotiana tabacum
Nitab4.5_0001288g0240 Nicotiana tabacum
Nitab4.5_0001288g0250 Nicotiana tabacum
Nitab4.5_0004246g0030 Nicotiana tabacum
Nitab4.5_0007533g0020 Nicotiana tabacum
Nn7g38150 Nelumbo nucifera
Oeu052670.1 Olea europaea
Oeu056030.1 Olea europaea
Os07g0567300 Oryza sativa ssp. japonica
Peaxi162Scf00149g00048 Petunia axillaris
Peaxi162Scf00149g00052 Petunia axillaris
PGR042G2559 Punica granatum
PGSC0003DMG400023214 Solanum tuberosum
PGSC0003DMG400025657 Solanum tuberosum
PGSC0003DMG400025658 Solanum tuberosum
Phvul.002G098100 Phaseolus vulgaris
Phvul.011G025900 Phaseolus vulgaris
Potri.015G122200 Populus trichocarpa
Pp3c16_9070 Physcomitrium patens
Pp3c24_4230 Physcomitrium patens
Pp3c5_15800 Physcomitrium patens
Pp3c6_8960 Physcomitrium patens
Prupe.4G112000 Prunus persica
Psat7g130520 Pisum sativum
Psat7g178040 Pisum sativum
PSO541G1718 Papaver somniferum
PSO675G2729 Papaver somniferum
QL11p016422 Quercus lobata
RcHm_v2.0_Chr5g0020101 Rosa chinensis
RcHm_v2.0_Chr5g0054961 Rosa chinensis
Rhsim13G0132200 Rhododendron simsii
Sabra15G0138300 Salix brachista
SalBow6G5406 Salvia bowleyana
SalBow8G3445 Salvia bowleyana
Sc12g0008200 Simmondsia chinensis
Sed0003868 Sechium edule
SEGI_06238 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39362 Striga asiatica
SHI34205 Sapria himalayana
SMO169G0101 Selaginella moellendorffii
Solyc02g068780.4 Solanum lycopersicum
Solyc02g068790.4 Solanum lycopersicum
Solyc02g068793.1 Solanum lycopersicum
Solyc04g014930.3 Solanum lycopersicum
Solyc04g014940.2 Solanum lycopersicum
Solyc04g014950.4 Solanum lycopersicum
Solyc04g014960.4 Solanum lycopersicum
Solyc10g082068.1 Solanum lycopersicum
Sopen02g017950 Solanum pennellii
Sopen02g017960 Solanum pennellii
Sp7g18380 Schrenkiella parvula
TAR371G0139 Trochodendron aralioides
TAR371G0760 Trochodendron aralioides
THA.LOC104806215 Tarenaya hassleriana
Thecc.06G143000 Theobroma cacao
Thhalv10024627m.g Eutrema salsugineum
TPR.G17182 Trifolium pratense
TPR.G20986 Trifolium pratense
TWI38G1208 Tripterygium wilfordii
TWI63G1813 Tripterygium wilfordii
unitig_21.g20196 Utricularia gibba
vmacro03521 Vaccinium macrocarpon
VMungo0251G2797 Vigna mungo
VMungo1127G1128 Vigna mungo
Zm00001eb324590 Zea mays

User provided reference genes

Program Settings