Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42290 Brassica napus
Actinidia19788 Actinidia chinensis
Actinidia19789 Actinidia chinensis
Actinidia24643 Actinidia chinensis
Actinidia28666 Actinidia chinensis
Ah.06g189340 Amaranthus hybridus
AL3G15780 Arabidopsis lyrata
Aqoxy5G00505 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.91A0PW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTPV8B Arachis hypogaea
AT3G05330 Arabidopsis thaliana
ATR0626G214 Amborella trichopoda
Atru.chr2.410 Acer truncatum
AUR62000830 Chenopodium quinoa
AUR62005144 Chenopodium quinoa
BcaC05g25071 Brassica carinata
BcaC05g30136 Brassica carinata
BcaC05g30154 Brassica carinata
BNapus_Darmor_BZH_scaffold_114p00170 Brassica napus
BolC1t05697H Brassica oleracea
BolC1t05700H Brassica oleracea
BolC5t34847H Brassica oleracea
BraA05t23024Z Brassica rapa
BraSC132t45510Z Brassica rapa
C05p10080 Brassica napus
C05p61870 Brassica napus
CAN.G1034.25 Capsicum annuum
CANSAT54G0893 Cannabis sativa
CARHR079680 Cardamine hirsuta
Carub.0003s0461 Capsella rubella
Ca_09350_v3 Cicer arietinum L.
Ca_09354_v3 Cicer arietinum L.
Ca_10113_v3 Cicer arietinum L.
Cc11_g03560 Coffea canephora
CDE10G0375 Ceratophyllum demersum
CDE10G0745 Ceratophyllum demersum
CDE10G0883 Ceratophyllum demersum
Ciclev10003680m.g Citrus clementina
CiPaw.07G017600 Carya illinoinensis
CiPaw.08G164900 Carya illinoinensis
COL.COLO4_13475 Corchorus olitorius
Cpa.g.sc48.48 Carica papaya
Cpa.g.sc48.49 Carica papaya
CsaV3_2G005250 Cucumis sativus L.
CSS0010861 Camellia sinensis var. sinensis
CSS0017838 Camellia sinensis var. sinensis
DCAR_003332 Daucus carota
DCAR_029413 Daucus carota
Dinv23942 Davidia involucrata
Duzib106G0633 Durio zibethinus
Duzib128G0091 Durio zibethinus
ECA240G3864 Erigeron canadensis
EL10Ac4g09352 Beta vulgaris
Eucgr.L01544 Eucalyptus grandis
FAN05G5436 Fragaria x ananassa
FAN05G5722 Fragaria x ananassa
FAN14G3900 Fragaria x ananassa
FvH4_6g05820 Fragaria vesca
Glyma.03G237700 Glycine max
Glyma.10G154100 Glycine max
Glyma.19G235300 Glycine max
Glyma.20G234200 Glycine max
Gohir.A01G045000 Gossypium hirsutum
Gohir.A08G210800 Gossypium hirsutum
Gohir.A11G264800 Gossypium hirsutum
Gohir.D04G107600 Gossypium hirsutum
Gohir.D05G046500 Gossypium hirsutum
Gohir.D08G115550 Gossypium hirsutum
Gohir.D08G227600 Gossypium hirsutum
Gohir.D09G147300 Gossypium hirsutum
Gohir.D10G096100 Gossypium hirsutum
Gohir.D11G275000 Gossypium hirsutum
Gohir.D12G153350 Gossypium hirsutum
Gorai.004G124500 Gossypium raimondii
Gorai.004G241800 Gossypium raimondii
Gorai.007G296800 Gossypium raimondii
GSVIVG01000048001 Vitis vinifera
HanXRQChr09g0248411 Helianthus annuus
Haze_04198 Corylus avellana
Hma1.2p1_0928F.1_g237810 Hydrangea macrophylla
HPP92_003277 Vanilla planifolia
Hund07068 Selenicereus undatus
Lalb_Chr02g0148231 Lupinus albus
Lalb_Chr04g0260731 Lupinus albus
Lj5A533T17 Lonicera japonica
Lj5g0019148 Lotus japonicus
Lsat_1_v5_gn_8_18301 Lactuca sativa
Lsat_1_v5_gn_9_123520 Lactuca sativa
Manes.08G120800 Manihot esculenta
Manes.09G166900 Manihot esculenta
MBI19_g05601_MAGBIO Magnolia biondii
MD00G1120700 Malus domestica
MD02G1275700 Malus domestica
MD04G1205400 Malus domestica
MD12G1219500 Malus domestica
Medtr1g082940 Medicago truncatula
Medtr7g113510 Medicago truncatula
MELO3C004268.2 Cucumis melo
Migut.B01038 Erythranthe guttata
Migut.N02003 Erythranthe guttata
Migut.O00711 Erythranthe guttata
MSTRG.27999 Avicennia marina
Nitab4.5_0000137g0030 Nicotiana tabacum
Nitab4.5_0003156g0010 Nicotiana tabacum
Nn4g26247 Nelumbo nucifera
Oeu017487.1 Olea europaea
Os02g0459300 Oryza sativa ssp. japonica
Peaxi162Scf00037g00632 Petunia axillaris
PGR083G0144 Punica granatum
PGSC0003DMG401024742 Solanum tuberosum
Phvul.006G091600 Phaseolus vulgaris
Phvul.007G179800 Phaseolus vulgaris
Potri.005G033200 Populus trichocarpa
Potri.013G022600 Populus trichocarpa
Prupe.6G326100 Prunus persica
Psat0s212g0040 Pisum sativum
Psat0s3135g0240 Pisum sativum
Psat3g073720 Pisum sativum
PSO210G5284 Papaver somniferum
PSO832G1768 Papaver somniferum
QL03p006978 Quercus lobata
RcHm_v2.0_Chr3g0454731 Rosa chinensis
Rhsim05G0141800 Rhododendron simsii
Sabra05G0035400 Salix brachista
Sabra13G0024700 Salix brachista
SalBow3G4161 Salvia bowleyana
Sc16g0008460 Simmondsia chinensis
Sed0004129 Sechium edule
SEGI_00809 Sequoiadendron giganteum
SEGI_03169 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25911 Striga asiatica
SGA_v2.0_scaffold81G26072 Striga asiatica
Solyc01g099270.2 Solanum lycopersicum
Sopen01g042820 Solanum pennellii
Sp3g04200 Schrenkiella parvula
TAR362G0189 Trochodendron aralioides
TAR633G0229 Trochodendron aralioides
THA.LOC104818696 Tarenaya hassleriana
Thecc.05G303800 Theobroma cacao
Thhalv10020613m.g Eutrema salsugineum
TPR.G11389 Trifolium pratense
TPR.G33190 Trifolium pratense
TWI12G0805 Tripterygium wilfordii
TWI56G1294 Tripterygium wilfordii
vmacro19624 Vaccinium macrocarpon
VMungo0540G0069 Vigna mungo
VMungo0720G3140 Vigna mungo
Zm00001eb047480 Zea mays
Zm00001eb092520 Zea mays
Zm00001eb269750 Zea mays
Zm00001eb286860 Zea mays
Zm00001eb393340 Zea mays

User provided reference genes

Program Settings