Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31830 Brassica napus
A01p31840 Brassica napus
A06p37310 Brassica napus
A09p05450 Brassica napus
Aa31LG11G9580 Aethionema arabicum
Actinidia16825 Actinidia chinensis
Actinidia35548 Actinidia chinensis
Ah.06g189880 Amaranthus hybridus
AL3G16200 Arabidopsis lyrata
AL6G39110 Arabidopsis lyrata
Aqoxy5G00762 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GZI5BF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9MLMM Arachis hypogaea
AT5G27830 Arabidopsis thaliana
ATR0796G269 Amborella trichopoda
Atru.chr2.82 Acer truncatum
AUR62000745 Chenopodium quinoa
AUR62005219 Chenopodium quinoa
BcaB04g19688 Brassica carinata
BcaB04g21439 Brassica carinata
BcaB04g21445 Brassica carinata
BcaC03g13846 Brassica carinata
BcaC04g23645 Brassica carinata
BcaC05g30108 Brassica carinata
BcaC09g47832 Brassica carinata
BcaC09g47833 Brassica carinata
BcaC09g47834 Brassica carinata
BcaC09g47835 Brassica carinata
BcaC09g47836 Brassica carinata
BcaNung04748 Brassica carinata
BolC1t05686H Brassica oleracea
BolC1t05687H Brassica oleracea
BolC2t07120H Brassica oleracea
BolC5t34822H Brassica oleracea
BolC7t44643H Brassica oleracea
BolC9t53517H Brassica oleracea
BraA01t03307Z Brassica rapa
BraA01t03308Z Brassica rapa
BraA01t03309Z Brassica rapa
BraA01t04479Z Brassica rapa
BraA01t04480Z Brassica rapa
BraA05t22958Z Brassica rapa
BraA09t36183Z Brassica rapa
C05p61640 Brassica napus
C07p41150 Brassica napus
C09p05910 Brassica napus
CAN.G1459.23 Capsicum annuum
CANSAT54G0531 Cannabis sativa
CARHR079990 Cardamine hirsuta
CARHR080000 Cardamine hirsuta
CARHR182590 Cardamine hirsuta
CARHR186320 Cardamine hirsuta
Carub.0006s2475 Capsella rubella
Ca_10143_v3 Cicer arietinum L.
CBR_g12354 Chara braunii
Cc02_g34310 Coffea canephora
CDE02G2578 Ceratophyllum demersum
Cfa006640 Carpinus fangiana
Ciclev10002011m.g Citrus clementina
CiPaw.07G022700 Carya illinoinensis
ClCG02G015400 Citrullus lanatus
COL.COLO4_10535 Corchorus olitorius
Cpa.g.sc48.101 Carica papaya
Cre06.g258000 Chlamydomonas reinhardtii
CsaV3_2G006680 Cucumis sativus L.
CSS0026736 Camellia sinensis var. sinensis
DCAR_003366 Daucus carota
Dinv30826 Davidia involucrata
Dinv40351 Davidia involucrata
Duzib128G0694 Durio zibethinus
Duzib177G0371 Durio zibethinus
ECA236G2863 Erigeron canadensis
EL10Ac4g09901 Beta vulgaris
Eucgr.H04546 Eucalyptus grandis
FAN02G2387 Fragaria x ananassa
FAN09G0782 Fragaria x ananassa
FAN09G2143 Fragaria x ananassa
FAN09G4274 Fragaria x ananassa
FvH4_3g41161 Fragaria vesca
FvH4_6g06800 Fragaria vesca
Glyma.10G150900 Glycine max
Glyma.20G237300 Glycine max
Gohir.A08G208500 Gossypium hirsutum
Gohir.D08G225300 Gossypium hirsutum
Gohir.D08G225400 Gossypium hirsutum
Gorai.004G239300 Gossypium raimondii
Gorai.004G239400 Gossypium raimondii
GSVIVG01031181001 Vitis vinifera
HanXRQChr11g0339841 Helianthus annuus
Haze_04127 Corylus avellana
Hma1.2p1_1021F.1_g248650 Hydrangea macrophylla
HPP92_010680 Vanilla planifolia
Hund21718 Selenicereus undatus
Lalb_Chr02g0148061 Lupinus albus
Lj5A372G14 Lonicera japonica
Lj5g0001629 Lotus japonicus
Lsat_1_v5_gn_7_74220 Lactuca sativa
Manes.08G116500 Manihot esculenta
Manes.09G171500 Manihot esculenta
Mapoly0073s0083 Marchantia polymorpha
MBI18_g24866_MAGBIO Magnolia biondii
MCO15G505 Micromonas commoda
MD04G1198500 Malus domestica
Medtr1g083450 Medicago truncatula
MELO3C004220.2 Cucumis melo
Migut.B01018 Erythranthe guttata
MSTRG.20411 Avicennia marina
Nitab4.5_0000646g0310 Nicotiana tabacum
Nitab4.5_0003113g0130 Nicotiana tabacum
Nitab4.5_0007800g0020 Nicotiana tabacum
Nn3g21515 Nelumbo nucifera
Oeu010923.1 Olea europaea
Oeu012128.1 Olea europaea
Os02g0592500 Oryza sativa ssp. japonica
Peaxi162Scf00037g01328 Petunia axillaris
PGR031G0640 Punica granatum
PGSC0003DMG400024721 Solanum tuberosum
Phvul.007G197800 Phaseolus vulgaris
Potri.005G024200 Populus trichocarpa
Potri.013G014800 Populus trichocarpa
PRCOL_00005226 Prasinoderma coloniale
Prupe.6G319500 Prunus persica
Psat6g150960 Pisum sativum
PSO210G5227 Papaver somniferum
QL03p019896 Quercus lobata
RcHm_v2.0_Chr2g0123281 Rosa chinensis
RcHm_v2.0_Chr3g0456161 Rosa chinensis
Rhsim07G0191000 Rhododendron simsii
Sabra05G0029600 Salix brachista
Sabra13G0012700 Salix brachista
SalBow7G2231 Salvia bowleyana
Sc09g0002890 Simmondsia chinensis
Sed0004465 Sechium edule
SEGI_16961 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38964 Striga asiatica
SHI18096 Sapria himalayana
SMO351G0431 Selaginella moellendorffii
Solyc01g099850.3 Solanum lycopersicum
Sopen01g043360 Solanum pennellii
Sp2g20950 Schrenkiella parvula
Sp3g04440 Schrenkiella parvula
TAR365G1036 Trochodendron aralioides
TAR636G2597 Trochodendron aralioides
THA.LOC104821728 Tarenaya hassleriana
Thecc.05G314300 Theobroma cacao
Thhalv10004669m.g Eutrema salsugineum
TPR.G17703 Trifolium pratense
TWI36G0513 Tripterygium wilfordii
TWI56G0640 Tripterygium wilfordii
unitig_37.g12625 Utricularia gibba
VMungo0720G2003 Vigna mungo
Zm00001eb183580 Zea mays

User provided reference genes

Program Settings