Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19650 Brassica napus
A03p57930 Brassica napus
A08p20180 Brassica napus
Actinidia08019 Actinidia chinensis
Actinidia09904 Actinidia chinensis
AL7G24360 Arabidopsis lyrata
AT4G28240 Arabidopsis thaliana
ATR0693G174 Amborella trichopoda
ATR0852G001 Amborella trichopoda
Atru.chr6.3079 Acer truncatum
BcaB03g12560 Brassica carinata
BcaC07g38318 Brassica carinata
BcaC09g50503 Brassica carinata
BcaNung01586 Brassica carinata
BolC1t02417H Brassica oleracea
BolC7t46082H Brassica oleracea
BolC8t48742H Brassica oleracea
BraA01t01898Z Brassica rapa
BraA03t14857Z Brassica rapa
BraA08t33978Z Brassica rapa
C01p24680 Brassica napus
C07p56050 Brassica napus
CAN.G980.5 Capsicum annuum
CARHR235950 Cardamine hirsuta
Carub.0007s1252 Capsella rubella
Ca_01537_v3 Cicer arietinum L.
Cc05_g06190 Coffea canephora
CDE05G0592 Ceratophyllum demersum
CDE05G2085 Ceratophyllum demersum
CDE10G0022 Ceratophyllum demersum
Cfa014541 Carpinus fangiana
Ciclev10017352m.g Citrus clementina
CiPaw.03G169600 Carya illinoinensis
CiPaw.04G122600 Carya illinoinensis
ClCG02G001310 Citrullus lanatus
COL.COLO4_13681 Corchorus olitorius
Cpa.g.sc34.87 Carica papaya
CsaV3_7G004130 Cucumis sativus L.
CSS0009105 Camellia sinensis var. sinensis
CSS0009600 Camellia sinensis var. sinensis
CSS0025457 Camellia sinensis var. sinensis
CSS0031952 Camellia sinensis var. sinensis
CSS0036889 Camellia sinensis var. sinensis
CSS0040113 Camellia sinensis var. sinensis
DCAR_012975 Daucus carota
Dinv13826 Davidia involucrata
ECA246G0483 Erigeron canadensis
ECA246G0551 Erigeron canadensis
ECA246G1803 Erigeron canadensis
ECA246G2857 Erigeron canadensis
ECA246G4438 Erigeron canadensis
Eucgr.K00912 Eucalyptus grandis
FAN02G3359 Fragaria x ananassa
FAN05G2643 Fragaria x ananassa
Glyma.06G298400 Glycine max
Glyma.12G201000 Glycine max
Glyma.13G301200 Glycine max
Gohir.A01G015300 Gossypium hirsutum
Gohir.A05G166000 Gossypium hirsutum
Gohir.D01G015300 Gossypium hirsutum
Gohir.D05G169000 Gossypium hirsutum
Gorai.002G017000 Gossypium raimondii
Gorai.009G174200 Gossypium raimondii
Haze_06585 Corylus avellana
Haze_09397 Corylus avellana
Haze_13080 Corylus avellana
Haze_13083 Corylus avellana
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla
HPP92_001805 Vanilla planifolia
Lalb_Chr14g0366611 Lupinus albus
Lalb_Chr22g0356331 Lupinus albus
Lalb_Chr22g0356341 Lupinus albus
Lj3g0009480 Lotus japonicus
Lj3g0021008 Lotus japonicus
Lsat_1_v5_gn_3_40020 Lactuca sativa
Lsat_1_v5_gn_3_40041 Lactuca sativa
Lsat_1_v5_gn_3_40080 Lactuca sativa
Lsat_1_v5_gn_3_40141 Lactuca sativa
Lsat_1_v5_gn_3_40321 Lactuca sativa
Lsat_1_v5_gn_3_40341 Lactuca sativa
Lsat_1_v5_gn_3_40361 Lactuca sativa
Lsat_1_v5_gn_3_40461 Lactuca sativa
Lsat_1_v5_gn_4_68580 Lactuca sativa
Manes.12G082700 Manihot esculenta
Manes.13G151900 Manihot esculenta
MBI02_g13229_MAGBIO Magnolia biondii
MBI18_g19832_MAGBIO Magnolia biondii
MBI18_g27682_MAGBIO Magnolia biondii
MD09G1096600 Malus domestica
MD17G1084900 Malus domestica
Medtr2g090010 Medicago truncatula
Medtr2g090015 Medicago truncatula
Medtr2g090020 Medicago truncatula
MELO3C018765.2 Cucumis melo
Migut.H01015 Erythranthe guttata
Migut.H01016 Erythranthe guttata
Migut.H01017 Erythranthe guttata
Migut.H01018 Erythranthe guttata
Migut.M00337 Erythranthe guttata
Nitab4.5_0002791g0020 Nicotiana tabacum
Nitab4.5_0005244g0070 Nicotiana tabacum
Nitab4.5_0010094g0010 Nicotiana tabacum
Nitab4.5_0011184g0010 Nicotiana tabacum
Nn1g03874 Nelumbo nucifera
Nn1g06781 Nelumbo nucifera
Nn2g11248 Nelumbo nucifera
Nn4g25531 Nelumbo nucifera
PGSC0003DMG400018373 Solanum tuberosum
Phvul.005G107800 Phaseolus vulgaris
Phvul.011G111100 Phaseolus vulgaris
Potri.013G147700 Populus trichocarpa
Potri.019G116300 Populus trichocarpa
Prupe.3G230300 Prunus persica
Psat5g269520 Pisum sativum
Psat5g269560 Pisum sativum
Psat5g269640 Pisum sativum
Psat5g269720 Pisum sativum
QL02p042335 Quercus lobata
QL05p081093 Quercus lobata
QL08p037147 Quercus lobata
RcHm_v2.0_Chr2g0161551 Rosa chinensis
Rhsim06G0152400 Rhododendron simsii
Sabra13G0119300 Salix brachista
Sabra19G0117300 Salix brachista
Sabra19G0136400 Salix brachista
SalBow7G0296 Salvia bowleyana
Sc06g0009320 Simmondsia chinensis
Sc21g0002480 Simmondsia chinensis
Sc21g0002490 Simmondsia chinensis
Sc21g0002500 Simmondsia chinensis
Sc21g0002510 Simmondsia chinensis
Sc21g0002520 Simmondsia chinensis
Sc21g0002530 Simmondsia chinensis
Sed0001014 Sechium edule
Sed0022545 Sechium edule
Sed0027638 Sechium edule
SGA_v2.0_scaffold159G37622 Striga asiatica
SGA_v2.0_scaffold70G23461 Striga asiatica
Solyc07g054730.1 Solanum lycopersicum
Solyc12g005600.1 Solanum lycopersicum
Sopen07g028660 Solanum pennellii
Sp7g26200 Schrenkiella parvula
TAR627G0102 Trochodendron aralioides
TAR629G1266 Trochodendron aralioides
THA.LOC104804066 Tarenaya hassleriana
Thecc.02G171400 Theobroma cacao
Thecc.06G200800 Theobroma cacao
Thhalv10026689m.g Eutrema salsugineum
TPR.G27093 Trifolium pratense
TWI36G0547 Tripterygium wilfordii
unitig_27.g24815 Utricularia gibba
unitig_699.g19386 Utricularia gibba

User provided reference genes

Program Settings