Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35930 Brassica napus
A05p31170 Brassica napus
Aa31LG8G5290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis
Actinidia31022 Actinidia chinensis
Actinidia31023 Actinidia chinensis
Actinidia35081 Actinidia chinensis
Ah.02g115350 Amaranthus hybridus
Ah.11g042150 Amaranthus hybridus
AL3G31770 Arabidopsis lyrata
Aqoxy3G03933 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea
AT3G18480 Arabidopsis thaliana
ATR0021G039 Amborella trichopoda
Atru.chr9.1054 Acer truncatum
Atru.chr9.1055 Acer truncatum
Atru.chr9.792 Acer truncatum
AUR62025880 Chenopodium quinoa
AUR62029852 Chenopodium quinoa
BcaB04g20769 Brassica carinata
BcaB06g25891 Brassica carinata
BcaC05g28614 Brassica carinata
BcaC07g39700 Brassica carinata
BcaC09g48805 Brassica carinata
BolC1t04537H Brassica oleracea
BolC5t33444H Brassica oleracea
BolC8t50465H Brassica oleracea
BraA01t03672Z Brassica rapa
BraA05t21958Z Brassica rapa
C01p45740 Brassica napus
C05p47190 Brassica napus
C08p28590 Brassica napus
CAN.G423.1 Capsicum annuum
CAN.G587.83 Capsicum annuum
CAN.G78.8 Capsicum annuum
CANSAT80G2884 Cannabis sativa
CARHR093830 Cardamine hirsuta
Carub.0003s1824 Capsella rubella
Ca_25454_v3 Cicer arietinum L.
CBR_g38539 Chara braunii
Cc04_g07300 Coffea canephora
CDE11G0344 Ceratophyllum demersum
Cfa019797 Carpinus fangiana
Cfa021462 Carpinus fangiana
Ciclev10019149m.g Citrus clementina
CiPaw.15G128500 Carya illinoinensis
ClCG03G012520 Citrullus lanatus
COL.COLO4_16258 Corchorus olitorius
Cpa.g.sc13.20 Carica papaya
Cre04.g223900 Chlamydomonas reinhardtii
Cre08.g382650 Chlamydomonas reinhardtii
CsaV3_1G043510 Cucumis sativus L.
CSS0007108 Camellia sinensis var. sinensis
CSS0011479 Camellia sinensis var. sinensis
CSS0025722 Camellia sinensis var. sinensis
DCAR_004539 Daucus carota
DCAR_013034 Daucus carota
Dinv40420 Davidia involucrata
Duzib084G1378 Durio zibethinus
ECA233G3214 Erigeron canadensis
EL10Ac5g11426 Beta vulgaris
Eucgr.B00707 Eucalyptus grandis
FAN04G0597 Fragaria x ananassa
FAN08G2631 Fragaria x ananassa
FAN18G2415 Fragaria x ananassa
FAN18G2885 Fragaria x ananassa
FvH4_5g12492 Fragaria vesca
Glyma.07G089600 Glycine max
Glyma.09G187100 Glycine max
Gohir.A09G047000 Gossypium hirsutum
Gohir.D09G047500 Gossypium hirsutum
Gohir.D12G266250 Gossypium hirsutum
Gorai.006G062600 Gossypium raimondii
Gorai.008G286000 Gossypium raimondii
GSVIVG01008258001 Vitis vinifera
HanXRQChr17g0558331 Helianthus annuus
Haze_18623 Corylus avellana
Haze_21726 Corylus avellana
HPP92_013215 Vanilla planifolia
HPP92_013216 Vanilla planifolia
HPP92_013262 Vanilla planifolia
Hund02403 Selenicereus undatus
Hund02405 Selenicereus undatus
Lalb_Chr22g0352981 Lupinus albus
Lalb_Chr24g0397611 Lupinus albus
Lj2g0006103 Lotus japonicus
Lj4g0025474 Lotus japonicus
Lj5C146T15 Lonicera japonica
Lsat_1_v5_gn_8_147101 Lactuca sativa
Manes.01G012900 Manihot esculenta
Manes.05G138800 Manihot esculenta
Mapoly0091s0053 Marchantia polymorpha
MBI13_g10043_MAGBIO Magnolia biondii
MCO10G228 Micromonas commoda
MD10G1081900 Malus domestica
Medtr8g103950 Medicago truncatula
MELO3C015107.2 Cucumis melo
MELO3C029547.2 Cucumis melo
Migut.M00003 Erythranthe guttata
MSTRG.14939 Avicennia marina
Nitab4.5_0001432g0010 Nicotiana tabacum
Nitab4.5_0001599g0070 Nicotiana tabacum
Nitab4.5_0008699g0010 Nicotiana tabacum
Nitab4.5_0010565g0010 Nicotiana tabacum
Nitab4.5_0010701g0010 Nicotiana tabacum
Nn3g17783 Nelumbo nucifera
Nn4g23774 Nelumbo nucifera
Oeu016160.3 Olea europaea
Os03g0710900 Oryza sativa ssp. japonica
Peaxi162Scf00013g00943 Petunia axillaris
PGR083G0937 Punica granatum
PGSC0003DMG400004053 Solanum tuberosum
Phvul.004G160100 Phaseolus vulgaris
Potri.012G061000 Populus trichocarpa
Pp3c16_23710 Physcomitrium patens
Pp3c25_10040 Physcomitrium patens
Pp3c3_5600 Physcomitrium patens
PRCOL_00005675 Prasinoderma coloniale
Prupe.8G103800 Prunus persica
Prupe.8G104400 Prunus persica
Psat7g009760 Pisum sativum
Psat7g012560 Pisum sativum
PSO063G6385 Papaver somniferum
PSO782G0716 Papaver somniferum
QL10p023827 Quercus lobata
RcHm_v2.0_Chr7g0184861 Rosa chinensis
Rhsim12G0143900 Rhododendron simsii
Sabra12G0044300 Salix brachista
Sc10g0009510 Simmondsia chinensis
Sed0018155 Sechium edule
SEGI_01686 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05151 Striga asiatica
SHI30382 Sapria himalayana
SMO147G0276 Selaginella moellendorffii
Solyc03g119670.3 Solanum lycopersicum
Solyc06g069210.3 Solanum lycopersicum
Sopen06g026470 Solanum pennellii
Sp3g16570 Schrenkiella parvula
TAR629G1790 Trochodendron aralioides
THA.LOC104821845 Tarenaya hassleriana
Thecc.03G030500 Theobroma cacao
Thhalv10020192m.g Eutrema salsugineum
TPR.G21711 Trifolium pratense
TWI15G0076 Tripterygium wilfordii
TWI81G0923 Tripterygium wilfordii
unitig_37.g12022 Utricularia gibba
vmacro16451 Vaccinium macrocarpon
vmacro23526 Vaccinium macrocarpon
VMungo0464G1696 Vigna mungo
Zm00001eb216420 Zea mays

User provided reference genes

Program Settings