Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13800 Brassica napus
Aa31LG3G11720 Aethionema arabicum
Actinidia05002 Actinidia chinensis
Actinidia30399 Actinidia chinensis
Actinidia30400 Actinidia chinensis
Actinidia30401 Actinidia chinensis
Actinidia37154 Actinidia chinensis
Ah.06g181450 Amaranthus hybridus
AL8G31380 Arabidopsis lyrata
Aqoxy4G00052 Aquilegia oxysepala
Aqoxy4G00053 Aquilegia oxysepala
Aqoxy4G02292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea
AT5G55820 Arabidopsis thaliana
ATR0712G030 Amborella trichopoda
ATR0712G078 Amborella trichopoda
ATR0712G152 Amborella trichopoda
ATR0751G141 Amborella trichopoda
ATR0820G104 Amborella trichopoda
Atru.chr2.3693 Acer truncatum
AUR62006337 Chenopodium quinoa
AUR62017108 Chenopodium quinoa
AUR62036461 Chenopodium quinoa
AUR62044126 Chenopodium quinoa
AUR62044127 Chenopodium quinoa
BcaB08g35940 Brassica carinata
BcaB08g35941 Brassica carinata
BcaB08g35942 Brassica carinata
BcaC01g06394 Brassica carinata
BolC3t14046H Brassica oleracea
BraA03t10683Z Brassica rapa
C02p15810 Brassica napus
C03p16240 Brassica napus
CAN.G623.12 Capsicum annuum
CANSAT11G1576 Cannabis sativa
CANSAT35G0529 Cannabis sativa
CARHR269190 Cardamine hirsuta
Carub.0008s1617 Capsella rubella
Ca_25650_v3 Cicer arietinum L.
Cc05_g14960 Coffea canephora
CDE02G2584 Ceratophyllum demersum
CDE02G4444 Ceratophyllum demersum
Ciclev10007227m.g Citrus clementina
CiPaw.11G204300 Carya illinoinensis
ClCG09G021380 Citrullus lanatus
COL.COLO4_09837 Corchorus olitorius
Cpa.g.c38368 Carica papaya
Cpa.g.sc12.114 Carica papaya
CsaV3_7G011380 Cucumis sativus L.
CSS0003147 Camellia sinensis var. sinensis
CSS0025459 Camellia sinensis var. sinensis
CSS0029600 Camellia sinensis var. sinensis
DCAR_013235 Daucus carota
Dinv10337 Davidia involucrata
Dinv40862 Davidia involucrata
Duzib213G0869 Durio zibethinus
ECA240G1942 Erigeron canadensis
EL10Ac4g07562 Beta vulgaris
Eucgr.F02046 Eucalyptus grandis
FAN01G1635 Fragaria x ananassa
FAN03G2987 Fragaria x ananassa
FAN06G1091 Fragaria x ananassa
FAN10G2990 Fragaria x ananassa
FvH4_7g06090 Fragaria vesca
Glyma.10G277400 Glycine max
Glyma.20G112200 Glycine max
Gohir.A01G091700 Gossypium hirsutum
Gohir.A13G132500 Gossypium hirsutum
Gohir.D01G061900 Gossypium hirsutum
Gohir.D13G135900 Gossypium hirsutum
Gorai.002G100500 Gossypium raimondii
Gorai.013G152400 Gossypium raimondii
GSVIVG01014692001 Vitis vinifera
HanXRQChr03g0074011 Helianthus annuus
HanXRQChr03g0074021 Helianthus annuus
HanXRQChr09g0275351 Helianthus annuus
HanXRQChr13g0408421 Helianthus annuus
Haze_09829 Corylus avellana
Hma1.2p1_1109F.1_g258180 Hydrangea macrophylla
HPP92_018201 Vanilla planifolia
Hund20644 Selenicereus undatus
Hund23108 Selenicereus undatus
Lalb_Chr06g0166281 Lupinus albus
Lalb_Chr21g0309081 Lupinus albus
Lj1A890T51 Lonicera japonica
Lj1A890T52 Lonicera japonica
Lj5g0000015 Lotus japonicus
Lsat_1_v5_gn_0_25701 Lactuca sativa
Lsat_1_v5_gn_9_90560 Lactuca sativa
Manes.03G141700 Manihot esculenta
Manes.15G059500 Manihot esculenta
MBI14_g10145_MAGBIO Magnolia biondii
MBI15_g03895_MAGBIO Magnolia biondii
MD00G1168200 Malus domestica
MD00G1168400 Malus domestica
MD03G1024600 Malus domestica
MD03G1025800 Malus domestica
MD11G1029700 Malus domestica
MD11G1030200 Malus domestica
Medtr1g111660 Medicago truncatula
MELO3C024947.2 Cucumis melo
Migut.M01650 Erythranthe guttata
Nitab4.5_0002736g0020 Nicotiana tabacum
Nitab4.5_0007415g0020 Nicotiana tabacum
Nn1g03169 Nelumbo nucifera
Oeu014362.2 Olea europaea
Oeu046935.1 Olea europaea
Peaxi162Scf00139g01321 Petunia axillaris
PGR083G2228 Punica granatum
PGSC0003DMG400022276 Solanum tuberosum
Phvul.003G265300 Phaseolus vulgaris
Phvul.007G023800 Phaseolus vulgaris
Potri.001G368200 Populus trichocarpa
Prupe.5G032900 Prunus persica
Prupe.7G022200 Prunus persica
Psat2g132080 Pisum sativum
Psat2g132120 Pisum sativum
Psat6g230520 Pisum sativum
PSO063G5346 Papaver somniferum
PSO541G5284 Papaver somniferum
PSO675G3612 Papaver somniferum
QL08p004015 Quercus lobata
RcHm_v2.0_Chr1g0333641 Rosa chinensis
Rhsim04G0012500 Rhododendron simsii
Rhsim06G0230000 Rhododendron simsii
Sabra16G0241300 Salix brachista
Sc03g0011330 Simmondsia chinensis
Sc03g0011420 Simmondsia chinensis
Sc16g0008100 Simmondsia chinensis
Sed0002835 Sechium edule
Sed0003689 Sechium edule
SGA_v2.0_scaffold168G38564 Striga asiatica
SGA_v2.0_scaffold171G38861 Striga asiatica
Solyc07g065600.3 Solanum lycopersicum
Sopen07g033810 Solanum pennellii
Sp6g17700 Schrenkiella parvula
TAR624G0729 Trochodendron aralioides
TAR626G1210 Trochodendron aralioides
THA.LOC104811669 Tarenaya hassleriana
Thecc.07G013200 Theobroma cacao
Thhalv10012421m.g Eutrema salsugineum
TPR.G26295 Trifolium pratense
TPR.G26309 Trifolium pratense
TWI38G0981 Tripterygium wilfordii
TWI39G0060 Tripterygium wilfordii
TWI39G0173 Tripterygium wilfordii
TWI39G0854 Tripterygium wilfordii
unitig_22.g5946 Utricularia gibba
vmacro11592 Vaccinium macrocarpon
vmacro11593 Vaccinium macrocarpon
VMungo0720G3177 Vigna mungo

User provided reference genes

Program Settings