Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12580 Brassica napus
A05p44760 Brassica napus
Aa31LG5G12410 Aethionema arabicum
Aa31LG5G12420 Aethionema arabicum
Aa31LG6G3230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis
Actinidia26949 Actinidia chinensis
Ah.09g235350 Amaranthus hybridus
AL3G11040 Arabidopsis lyrata
AL7G32900 Arabidopsis lyrata
Aqoxy4G01996 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea
AT3G01200 Arabidopsis thaliana
AT4G21210 Arabidopsis thaliana
ATR0762G046 Amborella trichopoda
Atru.chr10.2145 Acer truncatum
AUR62022016 Chenopodium quinoa
BcaB04g21426 Brassica carinata
BcaC05g30395 Brassica carinata
BcaC05g30485 Brassica carinata
BcaC09g47670 Brassica carinata
BcaC09g51244 Brassica carinata
BcaNung03833 Brassica carinata
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus
BolC1t01464H Brassica oleracea
BolC1t05929H Brassica oleracea
BolC1t05935H Brassica oleracea
BolC1t05939H Brassica oleracea
BolC5t35125H Brassica oleracea
BolC5t35131H Brassica oleracea
BraA01t01201Z Brassica rapa
BraA01t04644Z Brassica rapa
BraA05t23181Z Brassica rapa
C01p15150 Brassica napus
C09p75340 Brassica napus
CAN.G105.1 Capsicum annuum
CANSAT56G3094 Cannabis sativa
CANSAT64G1413 Cannabis sativa
CARHR075840 Cardamine hirsuta
CARHR227800 Cardamine hirsuta
Carub.0003s0094 Capsella rubella
Carub.0007s2021 Capsella rubella
Ca_10985_v3 Cicer arietinum L.
Ca_11005_v3 Cicer arietinum L.
Ca_29404_v3 Cicer arietinum L.
CBR_g38977 Chara braunii
Cc00_g17920 Coffea canephora
CDE05G0674 Ceratophyllum demersum
Cfa000278 Carpinus fangiana
Ciclev10015558m.g Citrus clementina
CiPaw.10G068200 Carya illinoinensis
ClCG03G004990 Citrullus lanatus
COL.COLO4_31722 Corchorus olitorius
Cpa.g.sc198.3 Carica papaya
Cpa.g.sc198.4 Carica papaya
Cre12.g514600 Chlamydomonas reinhardtii
CsaV3_1G011070 Cucumis sativus L.
CSS0001434 Camellia sinensis var. sinensis
CSS0008490 Camellia sinensis var. sinensis
DCAR_008123 Daucus carota
Dinv17835 Davidia involucrata
Dinv20013 Davidia involucrata
Dinv20014 Davidia involucrata
Duzib235G1297 Durio zibethinus
ECA236G4143 Erigeron canadensis
ECA248G0073 Erigeron canadensis
EL10Ac8g19899 Beta vulgaris
Eucgr.D00815 Eucalyptus grandis
FAN21G1397 Fragaria x ananassa
FAN25G1333 Fragaria x ananassa
FvH4_3g02680 Fragaria vesca
Glyma.10G252300 Glycine max
Glyma.20G141100 Glycine max
Gohir.A06G145700 Gossypium hirsutum
Gohir.D06G151600 Gossypium hirsutum
Gorai.010G176900 Gossypium raimondii
GSVIVG01012626001 Vitis vinifera
HanXRQChr01g0002521 Helianthus annuus
HanXRQChr05g0130051 Helianthus annuus
Haze_06733 Corylus avellana
Haze_06737 Corylus avellana
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla
HPP92_010083 Vanilla planifolia
HPP92_010092 Vanilla planifolia
Hund21377 Selenicereus undatus
Hund23515 Selenicereus undatus
Lalb_Chr02g0144591 Lupinus albus
Lj1A1224G37 Lonicera japonica
Lj2A274G58 Lonicera japonica
Lj5g0006944 Lotus japonicus
Lsat_1_v5_gn_1_125320 Lactuca sativa
Lsat_1_v5_gn_7_16981 Lactuca sativa
Manes.16G012700 Manihot esculenta
Mapoly0141s0024 Marchantia polymorpha
MBI02_g10099_MAGBIO Magnolia biondii
MCO14G521 Micromonas commoda
MD05G1340900 Malus domestica
MD10G1314400 Malus domestica
Medtr1g105545 Medicago truncatula
MELO3C002484.2 Cucumis melo
Migut.H01551 Erythranthe guttata
MSTRG.13160 Avicennia marina
MSTRG.14649 Avicennia marina
Nitab4.5_0003738g0050 Nicotiana tabacum
Nitab4.5_0006795g0010 Nicotiana tabacum
Nn1g03640 Nelumbo nucifera
Nn1g07024 Nelumbo nucifera
Oeu030985.2 Olea europaea
Os07g0530600 Oryza sativa ssp. japonica
Peaxi162Scf00678g00310 Petunia axillaris
PGR004G0955 Punica granatum
PGSC0003DMG400011280 Solanum tuberosum
Phvul.007G051900 Phaseolus vulgaris
Potri.004G022900 Populus trichocarpa
Pp3c11_19190 Physcomitrium patens
Prupe.4G026400 Prunus persica
Psat6g210360 Pisum sativum
PSO541G2305 Papaver somniferum
PSO675G0743 Papaver somniferum
QL04p046239 Quercus lobata
QL05p075217 Quercus lobata
QL10p027838 Quercus lobata
RcHm_v2.0_Chr5g0004011 Rosa chinensis
Rhsim13G0157800 Rhododendron simsii
Sabra04G0012600 Salix brachista
SalBow1G4699 Salvia bowleyana
Sc05g0008870 Simmondsia chinensis
Sed0001374 Sechium edule
SEGI_26962 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18268 Striga asiatica
SMO147G0180 Selaginella moellendorffii
Solyc10g005370.3 Solanum lycopersicum
Sopen10g001360 Solanum pennellii
Sp3g00900 Schrenkiella parvula
Sp7g19300 Schrenkiella parvula
TAR626G1121 Trochodendron aralioides
THA.LOC104812524 Tarenaya hassleriana
THA.LOC104821035 Tarenaya hassleriana
Thecc.06G213800 Theobroma cacao
Thhalv10020923m.g Eutrema salsugineum
Thhalv10025354m.g Eutrema salsugineum
TPR.G4570 Trifolium pratense
TPR.G5518 Trifolium pratense
TWI63G0472 Tripterygium wilfordii
unitig_26.g9396 Utricularia gibba
unitig_749.g13624 Utricularia gibba
vmacro03709 Vaccinium macrocarpon
VMungo0720G3178 Vigna mungo
Zm00001eb106240 Zea mays
Zm00001eb323140 Zea mays

User provided reference genes

Program Settings