Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32920 Brassica napus
A05p45200 Brassica napus
Aa31LG8G9600 Aethionema arabicum
Aa31LG9G2800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3218 Anthoceros agrestis
Actinidia04469 Actinidia chinensis
Actinidia40079 Actinidia chinensis
Ah.15g090410 Amaranthus hybridus
Ah.16g109860 Amaranthus hybridus
AL3G11690 Arabidopsis lyrata
AL7G41650 Arabidopsis lyrata
Aqoxy4G02560 Aquilegia oxysepala
Aqoxy5G03482 Aquilegia oxysepala
Aqoxy7G03808 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea
AT3G02400 Arabidopsis thaliana
AT4G14490 Arabidopsis thaliana
ATR0693G179 Amborella trichopoda
Atru.chr4.2164 Acer truncatum
BcaB04g21413 Brassica carinata
BcaC01g04448 Brassica carinata
BcaC01g04549 Brassica carinata
BcaC01g04551 Brassica carinata
BcaC05g30352 Brassica carinata
BcaC09g47698 Brassica carinata
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus
BolC1t05907H Brassica oleracea
BolC5t35084H Brassica oleracea
BraA05t23142Z Brassica rapa
BraSC141t45625Z Brassica rapa
C09p75700 Brassica napus
CAN.G1178.27 Capsicum annuum
CANSAT25G0083 Cannabis sativa
CANSAT78G0301 Cannabis sativa
CARHR076370 Cardamine hirsuta
Carub.0003s0149 Capsella rubella
Carub.0007s2773 Capsella rubella
Ca_18598_v3 Cicer arietinum L.
CBR_g21751 Chara braunii
CDE02G0054 Ceratophyllum demersum
CDE09G0593 Ceratophyllum demersum
Cfa008363 Carpinus fangiana
Cfa008364 Carpinus fangiana
Ciclev10004978m.g Citrus clementina
Ciclev10005174m.g Citrus clementina
CiPaw.01G189200 Carya illinoinensis
CiPaw.02G115600 Carya illinoinensis
ClCG05G004520 Citrullus lanatus
COL.COLO4_15806 Corchorus olitorius
Cpa.g.sc44.108 Carica papaya
Cre09.g402350 Chlamydomonas reinhardtii
CsaV3_3G012480 Cucumis sativus L.
CSS0034891 Camellia sinensis var. sinensis
DCAR_024234 Daucus carota
DCAR_028835 Daucus carota
Dinv29897 Davidia involucrata
Duzib151G1051 Durio zibethinus
Duzib212G0317 Durio zibethinus
ECA232G0897 Erigeron canadensis
ECA232G1138 Erigeron canadensis
EL10Ac7g16793 Beta vulgaris
Eucgr.G02729 Eucalyptus grandis
FAN12G1135 Fragaria x ananassa
FAN12G1996 Fragaria x ananassa
FAN17G0043 Fragaria x ananassa
FAN17G0464 Fragaria x ananassa
FAN28G1505 Fragaria x ananassa
FvH4_4g02980 Fragaria vesca
Glyma.07G201900 Glycine max
Glyma.13G174400 Glycine max
Gohir.A02G036200 Gossypium hirsutum
Gohir.D02G042900 Gossypium hirsutum
Gorai.005G047200 Gossypium raimondii
HanXRQChr05g0145861 Helianthus annuus
HanXRQChr09g0257341 Helianthus annuus
HanXRQChr11g0331421 Helianthus annuus
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla
HPP92_002667 Vanilla planifolia
HPP92_002725 Vanilla planifolia
HPP92_002726 Vanilla planifolia
HPP92_014115 Vanilla planifolia
HPP92_027936 Vanilla planifolia
Lalb_Chr05g0218581 Lupinus albus
Lj4g0009172 Lotus japonicus
Lj4g0026393 Lotus japonicus
Lj6P658T32 Lonicera japonica
Lj6P658T33 Lonicera japonica
Lsat_1_v5_gn_4_144160 Lactuca sativa
Manes.03G168000 Manihot esculenta
Mapoly0067s0089 Marchantia polymorpha
Mapoly0085s0039 Marchantia polymorpha
MBI19_g03257_MAGBIO Magnolia biondii
MD13G1205500 Malus domestica
MD16G1211500 Malus domestica
Medtr3g092440 Medicago truncatula
Medtr4g088235 Medicago truncatula
Medtr4g088240 Medicago truncatula
Medtr8g069140 Medicago truncatula
MELO3C006459.2 Cucumis melo
Migut.N00255 Erythranthe guttata
MSTRG.24695 Avicennia marina
Nitab4.5_0001381g0160 Nicotiana tabacum
Nitab4.5_0002289g0040 Nicotiana tabacum
Nn4g25548 Nelumbo nucifera
Oeu002595.1 Olea europaea
Os03g0728500 Oryza sativa ssp. japonica
Peaxi162Scf00209g00118 Petunia axillaris
PGR004G1107 Punica granatum
PGSC0003DMG400004768 Solanum tuberosum
Phvul.002G234300 Phaseolus vulgaris
Phvul.002G328500 Phaseolus vulgaris
Potri.010G074900 Populus trichocarpa
Pp3c18_4140 Physcomitrium patens
Pp3c19_11080 Physcomitrium patens
PRCOL_00002026 Prasinoderma coloniale
Prupe.1G033600 Prunus persica
Psat7g116640 Pisum sativum
PSO210G7662 Papaver somniferum
PSO761G0588 Papaver somniferum
QL04p071463 Quercus lobata
QL04p071625 Quercus lobata
QL06p016027 Quercus lobata
RcHm_v2.0_Chr4g0391131 Rosa chinensis
RcHm_v2.0_Chr7g0211851 Rosa chinensis
RcHm_v2.0_Chr7g0224291 Rosa chinensis
Rhsim04G0155000 Rhododendron simsii
Rhsim11G0181500 Rhododendron simsii
Sabra10G0033900 Salix brachista
SalBow3G2302 Salvia bowleyana
Sc25g0004110 Simmondsia chinensis
Sed0021810 Sechium edule
SEGI_17679 Sequoiadendron giganteum
SGA_v2.0_scaffold308G48094 Striga asiatica
SGA_v2.0_scaffold51G18683 Striga asiatica
SHI08746 Sapria himalayana
Solyc08g078470.4 Solanum lycopersicum
Sopen08g026960 Solanum pennellii
Sp3g01440 Schrenkiella parvula
TAR362G1060 Trochodendron aralioides
TAR633G1100 Trochodendron aralioides
THA.LOC104808605 Tarenaya hassleriana
Thecc.04G248100 Theobroma cacao
Thhalv10020728m.g Eutrema salsugineum
TPR.G14924 Trifolium pratense
TWI09G0514 Tripterygium wilfordii
TWI53G1508 Tripterygium wilfordii
TWI53G1633 Tripterygium wilfordii
unitig_52.g17411 Utricularia gibba
unitig_899.g14712 Utricularia gibba
VMungo0251G0345 Vigna mungo
Zm00001eb056120 Zea mays
Zm00001eb215540 Zea mays

User provided reference genes

Program Settings